RNA–Protein interactions for RNA: ENST00000362773.1

RNU4-90P-201, Transcript of RNA, U4 small nuclear 90, pseudogene, humanhuman

BASIC

Gene RNU4-90P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-90P-201ENST00000362773 ZNF778Q96MU6 729 aa2.9□□□□□ -1.95
RNU4-90P-201ENST00000362773 ORAI2Q96SN7 254 aa2.9□□□□□ -1.95
RNU4-90P-201ENST00000362773 QRSL1Q9H0R6 528 aaKnown RBP2.9□□□□□ -1.95
RNU4-90P-201ENST00000362773 GREM2Q9H772 168 aa2.9□□□□□ -1.95
RNU4-90P-201ENST00000362773 IFT122Q9HBG6 1241 aa2.9□□□□□ -1.95
RNU4-90P-201ENST00000362773 VTA1Q9NP79 307 aa2.9□□□□□ -1.95
RNU4-90P-201ENST00000362773 LANCL2Q9NS86 450 aa2.9□□□□□ -1.95
RNU4-90P-201ENST00000362773 RBM12Q9NTZ6 932 aaKnown RBP2.9□□□□□ -1.95
RNU4-90P-201ENST00000362773 MOCS1Q9NZB8 636 aa2.9□□□□□ -1.95
RNU4-90P-201ENST00000362773 AJAP1Q9UKB5 411 aaPredicted RBP2.9□□□□□ -1.95
RNU4-90P-201ENST00000362773 ACTL7AQ9Y615 435 aa2.9□□□□□ -1.95
RNU4-90P-201ENST00000362773 MRPL42Q9Y6G3 142 aaKnown RBP2.9□□□□□ -1.95
RNU4-90P-201ENST00000362773 ULK1O75385 1050 aa2.89□□□□□ -1.95
RNU4-90P-201ENST00000362773 ERN1O75460 977 aaKnown RBP2.89□□□□□ -1.95
RNU4-90P-201ENST00000362773 ELFN1P0C7U0 828 aa2.89□□□□□ -1.95
RNU4-90P-201ENST00000362773 CKBP12277 381 aa2.89□□□□□ -1.95
RNU4-90P-201ENST00000362773 SF3B3Q15393 1217 aaKnown RBP2.89□□□□□ -1.95
RNU4-90P-201ENST00000362773 RNF180Q86T96 592 aa2.89□□□□□ -1.95
RNU4-90P-201ENST00000362773 THNSL2Q86YJ6 484 aa2.89□□□□□ -1.95
RNU4-90P-201ENST00000362773 C9orf106Q8NAJ2 232 aa2.89□□□□□ -1.95
RNU4-90P-201ENST00000362773 SMG7Q92540 1137 aaKnown RBP2.89□□□□□ -1.95
RNU4-90P-201ENST00000362773 UBXN4Q92575 508 aa2.89□□□□□ -1.95
RNU4-90P-201ENST00000362773 USP7Q93009 1102 aa2.89□□□□□ -1.95
RNU4-90P-201ENST00000362773 FATE1Q969F0 183 aa2.89□□□□□ -1.95
RNU4-90P-201ENST00000362773 UROC1Q96N76 676 aa2.89□□□□□ -1.95
RNU4-90P-201ENST00000362773 UHRF1Q96T88 793 aaPredicted RBP2.89□□□□□ -1.95
RNU4-90P-201ENST00000362773 SENP6Q9GZR1 1112 aaPredicted RBP2.89□□□□□ -1.95
RNU4-90P-201ENST00000362773 IFT22Q9H7X7 185 aa2.89□□□□□ -1.95
RNU4-90P-201ENST00000362773 VSX1Q9NZR4 365 aaPredicted RBP2.89□□□□□ -1.95
RNU4-90P-201ENST00000362773 MAPRE3Q9UPY8 281 aa2.89□□□□□ -1.95
RNU4-90P-201ENST00000362773 MTO1Q9Y2Z2 717 aaKnown RBP2.89□□□□□ -1.95
RNU4-90P-201ENST00000362773 ZEB2O60315 1214 aa2.88□□□□□ -1.95
RNU4-90P-201ENST00000362773 AMY1AP04745 511 aa2.88□□□□□ -1.95
RNU4-90P-201ENST00000362773 FCER1AP12319 257 aa2.88□□□□□ -1.95
RNU4-90P-201ENST00000362773 MYCLP1P12525 358 aaPredicted RBP2.88□□□□□ -1.95
RNU4-90P-201ENST00000362773 FOLR3P41439 243 aa2.88□□□□□ -1.95
RNU4-90P-201ENST00000362773 MCAMP43121 646 aa2.88□□□□□ -1.95
RNU4-90P-201ENST00000362773 ZNF81P51508 661 aa2.88□□□□□ -1.95
RNU4-90P-201ENST00000362773 MAPK10P53779 464 aa2.88□□□□□ -1.95
RNU4-90P-201ENST00000362773 PER3P56645 1201 aa2.88□□□□□ -1.95
RNU4-90P-201ENST00000362773 ATP8B2P98198 1209 aa2.88□□□□□ -1.95
RNU4-90P-201ENST00000362773 SRSF4Q08170 494 aaKnown RBP2.88□□□□□ -1.95
RNU4-90P-201ENST00000362773 MTM1Q13496 603 aa2.88□□□□□ -1.95
RNU4-90P-201ENST00000362773 MUM1L1Q5H9M0 696 aa2.88□□□□□ -1.95
RNU4-90P-201ENST00000362773 STRA8Q7Z7C7 330 aa2.88□□□□□ -1.95
RNU4-90P-201ENST00000362773 ZGPATQ8N5A5 531 aaKnown RBP2.88□□□□□ -1.95
RNU4-90P-201ENST00000362773 OR2I1PQ8NGU4 316 aa2.88□□□□□ -1.95
RNU4-90P-201ENST00000362773 NUP133Q8WUM0 1156 aa2.88□□□□□ -1.95
RNU4-90P-201ENST00000362773 DPF1Q92782 380 aa2.88□□□□□ -1.95
RNU4-90P-201ENST00000362773 SARAFQ96BY9 339 aa2.88□□□□□ -1.95
RNU4-90P-201ENST00000362773 TIMP4Q99727 224 aa2.88□□□□□ -1.95
RNU4-90P-201ENST00000362773 ACE2Q9BYF1 805 aaPredicted RBP2.88□□□□□ -1.95
RNU4-90P-201ENST00000362773 KMT5AQ9NQR1 393 aa2.88□□□□□ -1.95
RNU4-90P-201ENST00000362773 DMTF1Q9Y222 760 aa2.88□□□□□ -1.95
RNU4-90P-201ENST00000362773 ENTPD2Q9Y5L3 495 aa2.88□□□□□ -1.95
RNU4-90P-201ENST00000362773 CDHR4A6H8M9 788 aa2.87□□□□□ -1.95
RNU4-90P-201ENST00000362773 PEX1O43933 1283 aa2.87□□□□□ -1.95
RNU4-90P-201ENST00000362773 GPR32O75388 356 aa2.87□□□□□ -1.95
RNU4-90P-201ENST00000362773 ENDOD1O94919 500 aa2.87□□□□□ -1.95
RNU4-90P-201ENST00000362773 WT1P19544 449 aaPredicted RBP2.87□□□□□ -1.95
RNU4-90P-201ENST00000362773 SLC6A4P31645 630 aa2.87□□□□□ -1.95
RNU4-90P-201ENST00000362773 SRSF2Q01130 221 aaKnown RBP2.87□□□□□ -1.95
RNU4-90P-201ENST00000362773 MGAT2Q10469 447 aa2.87□□□□□ -1.95
RNU4-90P-201ENST00000362773 MALLQ13021 153 aa2.87□□□□□ -1.95
RNU4-90P-201ENST00000362773 ANO4Q32M45 955 aa2.87□□□□□ -1.95
RNU4-90P-201ENST00000362773 TOR2AQ5JU69 321 aa2.87□□□□□ -1.95
RNU4-90P-201ENST00000362773 GJC2Q5T442 439 aaPredicted RBP2.87□□□□□ -1.95
RNU4-90P-201ENST00000362773 VWA1Q6PCB0 445 aa2.87□□□□□ -1.95
RNU4-90P-201ENST00000362773 FOXR2Q6PJQ5 311 aa2.87□□□□□ -1.95
RNU4-90P-201ENST00000362773 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP2.87□□□□□ -1.95
RNU4-90P-201ENST00000362773 PEG10Q86TG7 708 aaKnown RBP2.87□□□□□ -1.95
RNU4-90P-201ENST00000362773 COLGALT2Q8IYK4 626 aa2.87□□□□□ -1.95
RNU4-90P-201ENST00000362773 FITM2Q8N6M3 262 aa2.87□□□□□ -1.95
RNU4-90P-201ENST00000362773 Q8N9P0 234 aaPredicted RBP2.87□□□□□ -1.95
RNU4-90P-201ENST00000362773 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.87□□□□□ -1.95
RNU4-90P-201ENST00000362773 DRC1Q96MC2 740 aa2.87□□□□□ -1.95
RNU4-90P-201ENST00000362773 PNKPQ96T60 521 aa2.87□□□□□ -1.95
RNU4-90P-201ENST00000362773 TTC1Q99614 292 aa2.87□□□□□ -1.95
RNU4-90P-201ENST00000362773 HEPHQ9BQS7 1158 aa2.87□□□□□ -1.95
RNU4-90P-201ENST00000362773 SLC29A3Q9BZD2 475 aa2.87□□□□□ -1.95
RNU4-90P-201ENST00000362773 GSTO2Q9H4Y5 243 aa2.87□□□□□ -1.95
RNU4-90P-201ENST00000362773 TMEM140Q9NV12 185 aa2.87□□□□□ -1.95
RNU4-90P-201ENST00000362773 ZNF70Q9UC06 446 aaPredicted RBP2.87□□□□□ -1.95
RNU4-90P-201ENST00000362773 APOBEC2Q9Y235 224 aaKnown RBP2.87□□□□□ -1.95
RNU4-90P-201ENST00000362773 RUVBL1Q9Y265 456 aaKnown RBP2.87□□□□□ -1.95
RNU4-90P-201ENST00000362773 TRGV11A0A075B6L2 103 aa2.86□□□□□ -1.95
RNU4-90P-201ENST00000362773 A0A1W2PS29 197 aa2.86□□□□□ -1.95
RNU4-90P-201ENST00000362773 TCRBV7S2A1N4TA0A589 114 aa2.86□□□□□ -1.95
RNU4-90P-201ENST00000362773 MANSC4A6NHS7 340 aaPredicted RBP2.86□□□□□ -1.95
RNU4-90P-201ENST00000362773 GOLGA8AA7E2F4 631 aa2.86□□□□□ -1.95
RNU4-90P-201ENST00000362773 PROB1E7EW31 1015 aa2.86□□□□□ -1.95
RNU4-90P-201ENST00000362773 YY2O15391 372 aa2.86□□□□□ -1.95
RNU4-90P-201ENST00000362773 MPPED1O15442 326 aa2.86□□□□□ -1.95
RNU4-90P-201ENST00000362773 PROM1O43490 865 aa2.86□□□□□ -1.95
RNU4-90P-201ENST00000362773 CELA2AP08217 269 aa2.86□□□□□ -1.95
RNU4-90P-201ENST00000362773 SRGNP10124 158 aa2.86□□□□□ -1.95
RNU4-90P-201ENST00000362773 MTHFD2P13995 350 aa2.86□□□□□ -1.95
RNU4-90P-201ENST00000362773 GATA3P23771 443 aa2.86□□□□□ -1.95
RNU4-90P-201ENST00000362773 ITPKBP27987 946 aa2.86□□□□□ -1.95
RNU4-90P-201ENST00000362773 MTNR1BP49286 362 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms