RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 DUOXA2Q1HG44 320 aa22.29■■□□□ 1.16
SHISA4-201ENST00000362011 ZACNQ401N2 412 aa22.29■■□□□ 1.16
SHISA4-201ENST00000362011 EPC2Q52LR7 807 aa22.29■■□□□ 1.16
SHISA4-201ENST00000362011 C15orf39Q6ZRI6 1047 aa22.29■■□□□ 1.16
SHISA4-201ENST00000362011 ECHDC2Q86YB7 292 aa22.29■■□□□ 1.16
SHISA4-201ENST00000362011 NEK11Q8NG66 645 aa22.29■■□□□ 1.16
SHISA4-201ENST00000362011 OR5B17Q8NGF7 314 aa22.29■■□□□ 1.16
SHISA4-201ENST00000362011 CACTINQ8WUQ7 758 aaKnown RBP22.29■■□□□ 1.16
SHISA4-201ENST00000362011 LINC01599Q8WXQ3 324 aa22.29■■□□□ 1.16
SHISA4-201ENST00000362011 NUP58Q9BVL2 599 aa22.29■■□□□ 1.16
SHISA4-201ENST00000362011 TSPYL2Q9H2G4 693 aaPredicted RBP22.29■■□□□ 1.16
SHISA4-201ENST00000362011 RNF39Q9H2S5 420 aa22.29■■□□□ 1.16
SHISA4-201ENST00000362011 PRDM12Q9H4Q4 367 aa22.29■■□□□ 1.16
SHISA4-201ENST00000362011 CNTN3Q9P232 1028 aa22.29■■□□□ 1.16
SHISA4-201ENST00000362011 DERAQ9Y315 318 aa22.29■■□□□ 1.16
SHISA4-201ENST00000362011 C9IYK1 514 aa22.28■■□□□ 1.16
SHISA4-201ENST00000362011 TNFRSF10AO00220 468 aa22.28■■□□□ 1.16
SHISA4-201ENST00000362011 NFICP08651 508 aa22.28■■□□□ 1.16
SHISA4-201ENST00000362011 KLK7P49862 253 aa22.28■■□□□ 1.16
SHISA4-201ENST00000362011 TFAMQ00059 246 aaKnown RBP22.28■■□□□ 1.16
SHISA4-201ENST00000362011 TDRD10Q5VZ19 366 aaKnown RBP22.28■■□□□ 1.16
SHISA4-201ENST00000362011 SLC24A5Q71RS6 500 aa22.28■■□□□ 1.16
SHISA4-201ENST00000362011 DEFB128Q7Z7B8 93 aa22.28■■□□□ 1.16
SHISA4-201ENST00000362011 RTN4RL1Q86UN2 441 aaPredicted RBP22.28■■□□□ 1.16
SHISA4-201ENST00000362011 FBXL13Q8NEE6 735 aa22.28■■□□□ 1.16
SHISA4-201ENST00000362011 VWCEQ96DN2 955 aa22.28■■□□□ 1.16
SHISA4-201ENST00000362011 IQCDQ96DY2 449 aa22.28■■□□□ 1.16
SHISA4-201ENST00000362011 KIF12Q96FN5 646 aa22.28■■□□□ 1.16
SHISA4-201ENST00000362011 TSPAN18Q96SJ8 248 aa22.28■■□□□ 1.16
SHISA4-201ENST00000362011 MTMR12Q9C0I1 747 aa22.28■■□□□ 1.16
SHISA4-201ENST00000362011 GIT1Q9Y2X7 761 aa22.28■■□□□ 1.16
SHISA4-201ENST00000362011 COQ4Q9Y3A0 265 aa22.28■■□□□ 1.16
SHISA4-201ENST00000362011 C2CD2Q9Y426 696 aa22.28■■□□□ 1.16
SHISA4-201ENST00000362011 PTPRSQ13332 1948 aa22.28■■□□□ 1.16
SHISA4-201ENST00000362011 PHACTR2O75167 634 aa22.27■■□□□ 1.16
SHISA4-201ENST00000362011 FGBP02675 491 aa22.27■■□□□ 1.16
SHISA4-201ENST00000362011 ATF7P17544 494 aaPredicted RBP22.27■■□□□ 1.16
SHISA4-201ENST00000362011 TRIM21P19474 475 aaKnown RBP22.27■■□□□ 1.16
SHISA4-201ENST00000362011 SLC9A1P19634 815 aa22.27■■□□□ 1.16
SHISA4-201ENST00000362011 PON1P27169 355 aa22.27■■□□□ 1.16
SHISA4-201ENST00000362011 PIK3CAP42336 1068 aa22.27■■□□□ 1.16
SHISA4-201ENST00000362011 TBX2Q13207 712 aaPredicted RBP22.27■■□□□ 1.16
SHISA4-201ENST00000362011 XKR4Q5GH76 650 aa22.27■■□□□ 1.16
SHISA4-201ENST00000362011 CNKSR3Q6P9H4 555 aa22.27■■□□□ 1.16
SHISA4-201ENST00000362011 ALKAL1Q6UXT8 129 aa22.27■■□□□ 1.16
SHISA4-201ENST00000362011 PPFIBP1Q86W92 1011 aa22.27■■□□□ 1.16
SHISA4-201ENST00000362011 EHBP1Q8NDI1 1231 aa22.27■■□□□ 1.16
SHISA4-201ENST00000362011 FAM84AQ96KN4 292 aa22.27■■□□□ 1.16
SHISA4-201ENST00000362011 INTS2Q9H0H0 1204 aaKnown RBP22.27■■□□□ 1.16
SHISA4-201ENST00000362011 KLK14Q9P0G3 267 aa22.27■■□□□ 1.16
SHISA4-201ENST00000362011 HLA-DRAP01903 254 aa22.26■■□□□ 1.15
SHISA4-201ENST00000362011 TPM1P09493 284 aa22.26■■□□□ 1.15
SHISA4-201ENST00000362011 IBSPP21815 317 aaPredicted RBP22.26■■□□□ 1.15
SHISA4-201ENST00000362011 FIGNQ5HY92 759 aa22.26■■□□□ 1.15
SHISA4-201ENST00000362011 TRAPPC11Q7Z392 1133 aa22.26■■□□□ 1.15
SHISA4-201ENST00000362011 RNF169Q8NCN4 708 aa22.26■■□□□ 1.15
SHISA4-201ENST00000362011 LPPQ93052 612 aa22.26■■□□□ 1.15
SHISA4-201ENST00000362011 RPS6KC1Q96S38 1066 aa22.26■■□□□ 1.15
SHISA4-201ENST00000362011 UBN1Q9NPG3 1134 aa22.26■■□□□ 1.15
SHISA4-201ENST00000362011 PLCB1Q9NQ66 1216 aa22.26■■□□□ 1.15
SHISA4-201ENST00000362011 FAM207AQ9NSI2 230 aaPredicted RBP22.26■■□□□ 1.15
SHISA4-201ENST00000362011 RAB20Q9NX57 234 aa22.26■■□□□ 1.15
SHISA4-201ENST00000362011 MSRAQ9UJ68 235 aa22.26■■□□□ 1.15
SHISA4-201ENST00000362011 XPOTO43592 962 aaKnown RBP22.25■■□□□ 1.15
SHISA4-201ENST00000362011 EOMESO95936 686 aa22.25■■□□□ 1.15
SHISA4-201ENST00000362011 PTMAP06454 111 aaKnown RBP22.25■■□□□ 1.15
SHISA4-201ENST00000362011 KCNE1P15382 129 aa22.25■■□□□ 1.15
SHISA4-201ENST00000362011 DEKP35659 375 aaKnown RBP22.25■■□□□ 1.15
SHISA4-201ENST00000362011 FAM189BP81408 668 aa22.25■■□□□ 1.15
SHISA4-201ENST00000362011 TCTN1Q2MV58 587 aa22.25■■□□□ 1.15
SHISA4-201ENST00000362011 TRIM65Q6PJ69 517 aa22.25■■□□□ 1.15
SHISA4-201ENST00000362011 AGMOQ6ZNB7 445 aa22.25■■□□□ 1.15
SHISA4-201ENST00000362011 ZNF598Q86UK7 904 aaKnown RBP22.25■■□□□ 1.15
SHISA4-201ENST00000362011 TAS1R2Q8TE23 839 aa22.25■■□□□ 1.15
SHISA4-201ENST00000362011 ASB2Q96Q27 587 aa22.25■■□□□ 1.15
SHISA4-201ENST00000362011 MTIF3Q9H2K0 278 aaKnown RBP22.25■■□□□ 1.15
SHISA4-201ENST00000362011 RSAD1Q9HA92 442 aa22.25■■□□□ 1.15
SHISA4-201ENST00000362011 YBX2Q9Y2T7 364 aaKnown RBP22.25■■□□□ 1.15
SHISA4-201ENST00000362011 MEIS3P2A8K0S8 358 aa22.24■■□□□ 1.15
SHISA4-201ENST00000362011 ENPP3O14638 875 aa22.24■■□□□ 1.15
SHISA4-201ENST00000362011 VNN1O95497 513 aa22.24■■□□□ 1.15
SHISA4-201ENST00000362011 GYPCP04921 128 aa22.24■■□□□ 1.15
SHISA4-201ENST00000362011 BEST2Q8NFU1 509 aa22.24■■□□□ 1.15
SHISA4-201ENST00000362011 LMO3Q8TAP4 145 aa22.24■■□□□ 1.15
SHISA4-201ENST00000362011 SEMA4DQ92854 862 aa22.24■■□□□ 1.15
SHISA4-201ENST00000362011 ZMAT2Q96NC0 199 aaKnown RBP22.24■■□□□ 1.15
SHISA4-201ENST00000362011 CXCL16Q9H2A7 254 aa22.24■■□□□ 1.15
SHISA4-201ENST00000362011 GANQ9H2C0 597 aa22.24■■□□□ 1.15
SHISA4-201ENST00000362011 ELAC1Q9H777 363 aaKnown RBP22.24■■□□□ 1.15
SHISA4-201ENST00000362011 SIX2Q9NPC8 291 aa22.24■■□□□ 1.15
SHISA4-201ENST00000362011 THEGQ9P2T0 379 aa22.24■■□□□ 1.15
SHISA4-201ENST00000362011 UBQLN1Q9UMX0 589 aaKnown RBP22.24■■□□□ 1.15
SHISA4-201ENST00000362011 CHD7Q9P2D1 2997 aa22.24■■□□□ 1.15
SHISA4-201ENST00000362011 SMIM28A0A1B0GU29 152 aa22.23■■□□□ 1.15
SHISA4-201ENST00000362011 PFKMP08237 780 aa22.23■■□□□ 1.15
SHISA4-201ENST00000362011 ACTN1P12814 892 aa22.23■■□□□ 1.15
SHISA4-201ENST00000362011 MLH1P40692 756 aa22.23■■□□□ 1.15
SHISA4-201ENST00000362011 GSDMDP57764 484 aa22.23■■□□□ 1.15
SHISA4-201ENST00000362011 TRPC3Q13507 836 aa22.23■■□□□ 1.15
SHISA4-201ENST00000362011 NCOA4Q13772 614 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms