RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 ZSWIM2Q8NEG5 633 aa14.9□□□□□ -0.02
CSNK1E-201ENST00000359867 BICD1Q96G01 975 aa14.9□□□□□ -0.02
CSNK1E-201ENST00000359867 NLRP4Q96MN2 994 aa14.9□□□□□ -0.02
CSNK1E-201ENST00000359867 GPR88Q9GZN0 384 aa14.9□□□□□ -0.02
CSNK1E-201ENST00000359867 TMEM117Q9H0C3 514 aa14.9□□□□□ -0.02
CSNK1E-201ENST00000359867 ACBD3Q9H3P7 528 aa14.9□□□□□ -0.02
CSNK1E-201ENST00000359867 RABEP2Q9H5N1 569 aa14.9□□□□□ -0.02
CSNK1E-201ENST00000359867 TMEM134Q9H6X4 195 aa14.9□□□□□ -0.02
CSNK1E-201ENST00000359867 SALL4Q9UJQ4 1053 aa14.9□□□□□ -0.02
CSNK1E-201ENST00000359867 SNX12Q9UMY4 172 aa14.9□□□□□ -0.02
CSNK1E-201ENST00000359867 AKT3Q9Y243 479 aa14.9□□□□□ -0.02
CSNK1E-201ENST00000359867 COQ4Q9Y3A0 265 aa14.9□□□□□ -0.02
CSNK1E-201ENST00000359867 A0A1W2PQ45 241 aaPredicted RBP14.9□□□□□ -0.02
CSNK1E-201ENST00000359867 A0A1W2PQY0 241 aa14.9□□□□□ -0.02
CSNK1E-201ENST00000359867 C17orf102A2RUQ5 167 aa14.9□□□□□ -0.02
CSNK1E-201ENST00000359867 RRN3P2A6NIE6 340 aa14.9□□□□□ -0.02
CSNK1E-201ENST00000359867 MAGEB2O15479 319 aa14.9□□□□□ -0.02
CSNK1E-201ENST00000359867 GAS2O43903 313 aaKnown RBP14.9□□□□□ -0.02
CSNK1E-201ENST00000359867 ADAM17P78536 824 aa14.9□□□□□ -0.02
CSNK1E-201ENST00000359867 LAMTOR4Q0VGL1 99 aa14.9□□□□□ -0.02
CSNK1E-201ENST00000359867 KRT39Q6A163 491 aa14.9□□□□□ -0.02
CSNK1E-201ENST00000359867 GDF6Q6KF10 455 aaPredicted RBP14.9□□□□□ -0.02
CSNK1E-201ENST00000359867 DEPTORQ8TB45 409 aa14.9□□□□□ -0.02
CSNK1E-201ENST00000359867 GLT1D1Q96MS3 346 aa14.9□□□□□ -0.02
CSNK1E-201ENST00000359867 PSMB7Q99436 277 aa14.9□□□□□ -0.02
CSNK1E-201ENST00000359867 TMEM8AQ9HCN3 771 aa14.9□□□□□ -0.02
CSNK1E-201ENST00000359867 MED4Q9NPJ6 270 aa14.9□□□□□ -0.02
CSNK1E-201ENST00000359867 GTF2IRD1Q9UHL9 959 aa14.9□□□□□ -0.02
CSNK1E-201ENST00000359867 CYP2C9P11712 490 aa14.89□□□□□ -0.03
CSNK1E-201ENST00000359867 GGCXP38435 758 aa14.89□□□□□ -0.03
CSNK1E-201ENST00000359867 CYP24A1Q07973 514 aa14.89□□□□□ -0.03
CSNK1E-201ENST00000359867 PKN2Q16513 984 aaKnown RBP14.89□□□□□ -0.03
CSNK1E-201ENST00000359867 IFI16Q16666 785 aaKnown RBP14.89□□□□□ -0.03
CSNK1E-201ENST00000359867 SLFN12LQ6IEE8 588 aa14.89□□□□□ -0.03
CSNK1E-201ENST00000359867 RNF149Q8NC42 400 aa14.89□□□□□ -0.03
CSNK1E-201ENST00000359867 TCP11Q8WWU5 503 aa14.89□□□□□ -0.03
CSNK1E-201ENST00000359867 SAAL1Q96ER3 474 aa14.89□□□□□ -0.03
CSNK1E-201ENST00000359867 JPH2Q9BR39 696 aaPredicted RBP14.89□□□□□ -0.03
CSNK1E-201ENST00000359867 SMARCAL1Q9NZC9 954 aa14.89□□□□□ -0.03
CSNK1E-201ENST00000359867 MBLAC1A4D2B0 266 aaPredicted RBP14.89□□□□□ -0.03
CSNK1E-201ENST00000359867 KBTBD13C9JR72 458 aa14.89□□□□□ -0.03
CSNK1E-201ENST00000359867 CSDE1O75534 798 aaKnown RBP14.89□□□□□ -0.03
CSNK1E-201ENST00000359867 IVLP07476 585 aa14.89□□□□□ -0.03
CSNK1E-201ENST00000359867 TCP1P17987 556 aaKnown RBP14.89□□□□□ -0.03
CSNK1E-201ENST00000359867 MATR3P43243 847 aaKnown RBP eCLIP14.89□□□□□ -0.03
CSNK1E-201ENST00000359867 LIG4P49917 911 aa14.89□□□□□ -0.03
CSNK1E-201ENST00000359867 ITGA7Q13683 1181 aa14.89□□□□□ -0.03
CSNK1E-201ENST00000359867 SWT1Q5T5J6 900 aaKnown RBP14.89□□□□□ -0.03
CSNK1E-201ENST00000359867 SUGP1Q8IWZ8 645 aaKnown RBP14.89□□□□□ -0.03
CSNK1E-201ENST00000359867 KIAA0319LQ8IZA0 1049 aa14.89□□□□□ -0.03
CSNK1E-201ENST00000359867 SLC30A5Q8TAD4 765 aa14.89□□□□□ -0.03
CSNK1E-201ENST00000359867 ARMC5Q96C12 935 aa14.89□□□□□ -0.03
CSNK1E-201ENST00000359867 UBE2TQ9NPD8 197 aaPredicted RBP14.89□□□□□ -0.03
CSNK1E-201ENST00000359867 GINS2Q9Y248 185 aa14.89□□□□□ -0.03
CSNK1E-201ENST00000359867 PCDHGC5Q9Y5F6 944 aa14.89□□□□□ -0.03
CSNK1E-201ENST00000359867 MOXD2PA6NHM9 499 aa14.88□□□□□ -0.03
CSNK1E-201ENST00000359867 ZNF233A6NK53 670 aa14.88□□□□□ -0.03
CSNK1E-201ENST00000359867 K7ERI5 159 aa14.88□□□□□ -0.03
CSNK1E-201ENST00000359867 DDX3XO00571 662 aaKnown RBP eCLIP14.88□□□□□ -0.035e-13■■■■□ 24.3
CSNK1E-201ENST00000359867 EXTL3O43909 919 aa14.88□□□□□ -0.03
CSNK1E-201ENST00000359867 TUBBP07437 444 aa14.88□□□□□ -0.03
CSNK1E-201ENST00000359867 HOXC8P31273 242 aa14.88□□□□□ -0.03
CSNK1E-201ENST00000359867 NAP1L1P55209 391 aaKnown RBP14.88□□□□□ -0.03
CSNK1E-201ENST00000359867 U2AF1L4Q8WU68 220 aaKnown RBP14.88□□□□□ -0.03
CSNK1E-201ENST00000359867 DNAJB3Q8WWF6 145 aa14.88□□□□□ -0.03
CSNK1E-201ENST00000359867 SYT11Q9BT88 431 aa14.88□□□□□ -0.03
CSNK1E-201ENST00000359867 EHD2Q9NZN4 543 aa14.88□□□□□ -0.03
CSNK1E-201ENST00000359867 HYOU1Q9Y4L1 999 aa14.88□□□□□ -0.03
CSNK1E-201ENST00000359867 A0A0A6YYK5 440 aaPredicted RBP14.88□□□□□ -0.03
CSNK1E-201ENST00000359867 TMOD1P28289 359 aa14.88□□□□□ -0.03
CSNK1E-201ENST00000359867 SELENOOQ9BVL4 669 aa14.88□□□□□ -0.03
CSNK1E-201ENST00000359867 STARD7Q9NQZ5 370 aa14.88□□□□□ -0.03
CSNK1E-201ENST00000359867 OGDHLQ9ULD0 1010 aa14.88□□□□□ -0.03
CSNK1E-201ENST00000359867 BUB1O43683 1085 aa14.87□□□□□ -0.03
CSNK1E-201ENST00000359867 KIF1CO43896 1103 aaKnown RBP14.87□□□□□ -0.03
CSNK1E-201ENST00000359867 LDHAP00338 332 aaKnown RBP14.87□□□□□ -0.03
CSNK1E-201ENST00000359867 H2AFZP0C0S5 128 aa14.87□□□□□ -0.03
CSNK1E-201ENST00000359867 GPC3P51654 580 aa14.87□□□□□ -0.03
CSNK1E-201ENST00000359867 MXD4Q14582 209 aaPredicted RBP14.87□□□□□ -0.03
CSNK1E-201ENST00000359867 H2AFVQ71UI9 128 aa14.87□□□□□ -0.03
CSNK1E-201ENST00000359867 HDAC7Q8WUI4 952 aa14.87□□□□□ -0.03
CSNK1E-201ENST00000359867 WNT8BQ93098 351 aa14.87□□□□□ -0.03
CSNK1E-201ENST00000359867 TSEN34Q9BSV6 310 aaKnown RBP14.87□□□□□ -0.03
CSNK1E-201ENST00000359867 PACSIN1Q9BY11 444 aa14.87□□□□□ -0.03
CSNK1E-201ENST00000359867 TRMT13Q9NUP7 481 aaKnown RBP14.87□□□□□ -0.03
CSNK1E-201ENST00000359867 A0A087WZ62 844 aa14.87□□□□□ -0.03
CSNK1E-201ENST00000359867 FOXN3O00409 490 aaPredicted RBP14.87□□□□□ -0.03
CSNK1E-201ENST00000359867 DNM1LO00429 736 aa14.87□□□□□ -0.03
CSNK1E-201ENST00000359867 NLRP11P59045 1033 aaKnown RBP14.87□□□□□ -0.03
CSNK1E-201ENST00000359867 ARHGAP44Q17R89 818 aa14.87□□□□□ -0.03
CSNK1E-201ENST00000359867 KIZQ2M2Z5 673 aa14.87□□□□□ -0.03
CSNK1E-201ENST00000359867 ZNF572Q7Z3I7 529 aaPredicted RBP14.87□□□□□ -0.03
CSNK1E-201ENST00000359867 ARHGEF19Q8IW93 802 aa14.87□□□□□ -0.03
CSNK1E-201ENST00000359867 COG1Q8WTW3 980 aa14.87□□□□□ -0.03
CSNK1E-201ENST00000359867 CCDC127Q96BQ5 260 aa14.87□□□□□ -0.03
CSNK1E-201ENST00000359867 FDXACB1Q9BRP7 624 aaPredicted RBP14.87□□□□□ -0.03
CSNK1E-201ENST00000359867 SIP14410 1827 aa14.87□□□□□ -0.03
CSNK1E-201ENST00000359867 EDN1P05305 212 aa14.86□□□□□ -0.03
CSNK1E-201ENST00000359867 GNAT1P11488 350 aa14.86□□□□□ -0.03
CSNK1E-201ENST00000359867 CXCR5P32302 372 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms