RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 GRAP2O75791 330 aa11.74□□□□□ -0.53
COL11A1-202ENST00000358392 TBXAS1P24557 533 aaPredicted RBP11.74□□□□□ -0.53
COL11A1-202ENST00000358392 DAB2IPQ5VWQ8 1189 aa11.74□□□□□ -0.53
COL11A1-202ENST00000358392 UXS1Q8NBZ7 420 aa11.74□□□□□ -0.53
COL11A1-202ENST00000358392 DNAJC9Q8WXX5 260 aa11.74□□□□□ -0.53
COL11A1-202ENST00000358392 GFM2Q969S9 779 aaKnown RBP11.74□□□□□ -0.53
COL11A1-202ENST00000358392 SLC10A4Q96EP9 437 aa11.74□□□□□ -0.53
COL11A1-202ENST00000358392 LIMA1Q9UHB6 759 aaKnown RBP11.74□□□□□ -0.53
COL11A1-202ENST00000358392 LOC102724428A0A0B4J2F2 783 aa11.74□□□□□ -0.53
COL11A1-202ENST00000358392 TPST1O60507 370 aa11.74□□□□□ -0.53
COL11A1-202ENST00000358392 TARSP26639 723 aaKnown RBP11.74□□□□□ -0.53
COL11A1-202ENST00000358392 NME5P56597 212 aa11.74□□□□□ -0.53
COL11A1-202ENST00000358392 SIK1P57059 783 aa11.74□□□□□ -0.53
COL11A1-202ENST00000358392 DMPKQ09013 629 aa11.74□□□□□ -0.53
COL11A1-202ENST00000358392 GTF2H3Q13889 308 aa11.74□□□□□ -0.53
COL11A1-202ENST00000358392 TRIM16LQ309B1 348 aa11.74□□□□□ -0.53
COL11A1-202ENST00000358392 NLRP10Q86W26 655 aa11.74□□□□□ -0.53
COL11A1-202ENST00000358392 WDR24Q96S15 920 aa11.74□□□□□ -0.53
COL11A1-202ENST00000358392 PAPOLBQ9NRJ5 636 aaKnown RBP11.74□□□□□ -0.53
COL11A1-202ENST00000358392 GRIN2AQ12879 1464 aa11.74□□□□□ -0.53
COL11A1-202ENST00000358392 RNF123Q5XPI4 1314 aa11.74□□□□□ -0.53
COL11A1-202ENST00000358392 LAMC3Q9Y6N6 1575 aa11.74□□□□□ -0.53
COL11A1-202ENST00000358392 LOC100653049A0A140TA62 436 aa11.74□□□□□ -0.53
COL11A1-202ENST00000358392 KRT34O76011 436 aa11.74□□□□□ -0.53
COL11A1-202ENST00000358392 CYLC2Q14093 348 aaPredicted RBP11.74□□□□□ -0.53
COL11A1-202ENST00000358392 ARL6IP4Q66PJ3 421 aaKnown RBP11.74□□□□□ -0.53
COL11A1-202ENST00000358392 CCT8L2Q96SF2 557 aa11.74□□□□□ -0.53
COL11A1-202ENST00000358392 KLHL25Q9H0H3 589 aa11.74□□□□□ -0.53
COL11A1-202ENST00000358392 STAP2Q9UGK3 403 aa11.74□□□□□ -0.53
COL11A1-202ENST00000358392 RASSF9O75901 435 aa11.74□□□□□ -0.53
COL11A1-202ENST00000358392 ARL4DP49703 201 aa11.74□□□□□ -0.53
COL11A1-202ENST00000358392 OR8H2Q8N162 312 aa11.74□□□□□ -0.53
COL11A1-202ENST00000358392 RAB6BQ9NRW1 208 aa11.74□□□□□ -0.53
COL11A1-202ENST00000358392 PITPNM2Q9BZ72 1349 aa11.74□□□□□ -0.53
COL11A1-202ENST00000358392 SCFD1Q8WVM8 642 aa11.74□□□□□ -0.53
COL11A1-202ENST00000358392 LATS2Q9NRM7 1088 aa11.74□□□□□ -0.53
COL11A1-202ENST00000358392 USP15Q9Y4E8 981 aaPredicted RBP11.74□□□□□ -0.53
COL11A1-202ENST00000358392 BLMP54132 1417 aaPredicted RBP11.73□□□□□ -0.53
COL11A1-202ENST00000358392 B2RBV5 119 aa11.73□□□□□ -0.53
COL11A1-202ENST00000358392 HIST1H2AGP0C0S8 130 aaPredicted RBP11.73□□□□□ -0.53
COL11A1-202ENST00000358392 MYBP10242 640 aa11.73□□□□□ -0.53
COL11A1-202ENST00000358392 AKR1B1P15121 316 aa11.73□□□□□ -0.53
COL11A1-202ENST00000358392 HIST1H2ADP20671 130 aa11.73□□□□□ -0.53
COL11A1-202ENST00000358392 ETFBP38117 255 aa11.73□□□□□ -0.53
COL11A1-202ENST00000358392 IREB2P48200 963 aaKnown RBP11.73□□□□□ -0.53
COL11A1-202ENST00000358392 FAM160B2Q86V87 743 aa11.73□□□□□ -0.53
COL11A1-202ENST00000358392 SHCBP1Q8NEM2 672 aa11.73□□□□□ -0.53
COL11A1-202ENST00000358392 SPATA4Q8NEY3 305 aa11.73□□□□□ -0.53
COL11A1-202ENST00000358392 SLC35G2Q8TBE7 412 aa11.73□□□□□ -0.53
COL11A1-202ENST00000358392 DTNBP1Q96EV8 351 aa11.73□□□□□ -0.53
COL11A1-202ENST00000358392 HIST1H2AHQ96KK5 128 aa11.73□□□□□ -0.53
COL11A1-202ENST00000358392 HIST1H2AJQ99878 128 aa11.73□□□□□ -0.53
COL11A1-202ENST00000358392 H2AFJQ9BTM1 129 aa11.73□□□□□ -0.53
COL11A1-202ENST00000358392 CCDC134Q9H6E4 229 aa11.73□□□□□ -0.53
COL11A1-202ENST00000358392 NDUFS3O75489 264 aa11.73□□□□□ -0.53
COL11A1-202ENST00000358392 DGKHQ86XP1 1220 aa11.73□□□□□ -0.53
COL11A1-202ENST00000358392 SEPT3Q9UH03 358 aa11.73□□□□□ -0.53
COL11A1-202ENST00000358392 SCP2P22307 547 aa11.73□□□□□ -0.53
COL11A1-202ENST00000358392 IRX1P78414 480 aaPredicted RBP11.73□□□□□ -0.53
COL11A1-202ENST00000358392 PTK7Q13308 1070 aa11.73□□□□□ -0.53
COL11A1-202ENST00000358392 TTC33Q6PID6 262 aaPredicted RBP11.73□□□□□ -0.53
COL11A1-202ENST00000358392 C9orf72Q96LT7 481 aa11.73□□□□□ -0.53
COL11A1-202ENST00000358392 MCEEQ96PE7 176 aa11.73□□□□□ -0.53
COL11A1-202ENST00000358392 DEPDC7Q96QD5 511 aa11.73□□□□□ -0.53
COL11A1-202ENST00000358392 MUC3BQ9H195 1237 aa11.73□□□□□ -0.53
COL11A1-202ENST00000358392 RPAP3Q9H6T3 665 aaPredicted RBP11.73□□□□□ -0.53
COL11A1-202ENST00000358392 MLNP12872 115 aa11.73□□□□□ -0.53
COL11A1-202ENST00000358392 MZF1P28698 734 aaPredicted RBP11.73□□□□□ -0.53
COL11A1-202ENST00000358392 AKIRIN2Q53H80 203 aa11.73□□□□□ -0.53
COL11A1-202ENST00000358392 MFSD4BQ5TF39 518 aa11.73□□□□□ -0.53
COL11A1-202ENST00000358392 SNRNP48Q6IEG0 339 aaKnown RBP11.73□□□□□ -0.53
COL11A1-202ENST00000358392 P3H2Q8IVL5 708 aa11.73□□□□□ -0.53
COL11A1-202ENST00000358392 PROM2Q8N271 834 aa11.73□□□□□ -0.53
COL11A1-202ENST00000358392 AGPAT1Q99943 283 aa11.73□□□□□ -0.53
COL11A1-202ENST00000358392 RANBP17Q9H2T7 1088 aaKnown RBP11.73□□□□□ -0.53
COL11A1-202ENST00000358392 IGF2BP3O00425 579 aaKnown RBP eCLIP11.73□□□□□ -0.53
COL11A1-202ENST00000358392 USP1O94782 785 aa11.73□□□□□ -0.53
COL11A1-202ENST00000358392 CAPN1P07384 714 aa11.73□□□□□ -0.53
COL11A1-202ENST00000358392 CEP95Q96GE4 821 aa11.73□□□□□ -0.53
COL11A1-202ENST00000358392 TMEM117Q9H0C3 514 aa11.73□□□□□ -0.53
COL11A1-202ENST00000358392 COPRSQ9NQ92 184 aa11.73□□□□□ -0.53
COL11A1-202ENST00000358392 ZC3H7BQ9UGR2 993 aaKnown RBP11.73□□□□□ -0.53
COL11A1-202ENST00000358392 ZBTB1Q9Y2K1 713 aa11.73□□□□□ -0.53
COL11A1-202ENST00000358392 GNAT1P11488 350 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 DHX34Q14147 1143 aaKnown RBP11.72□□□□□ -0.53
COL11A1-202ENST00000358392 STAT4Q14765 748 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 DNAL1Q4LDG9 190 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 KRT77Q7Z794 578 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 TBC1D10CQ8IV04 446 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 SLC44A2Q8IWA5 706 aaPredicted RBP11.72□□□□□ -0.53
COL11A1-202ENST00000358392 OPTNQ96CV9 577 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 MRPL4Q9BYD3 311 aaKnown RBP11.72□□□□□ -0.53
COL11A1-202ENST00000358392 ADGRG1Q9Y653 693 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 MYO3BQ8WXR4 1341 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 CHI3L2Q15782 390 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 SMTNL2Q2TAL5 461 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 YAF2Q8IY57 180 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 SH2D3AQ9BRG2 576 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 LXNQ9BS40 222 aa11.72□□□□□ -0.53
COL11A1-202ENST00000358392 BLOC1S6Q9UL45 172 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms