RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 SLC20A1Q8WUM9 679 aa10.59□□□□□ -0.71
RNF40-202ENST00000357890 ARHGEF26Q96DR7 871 aa10.59□□□□□ -0.71
RNF40-202ENST00000357890 BTBD6Q96KE9 485 aa10.59□□□□□ -0.71
RNF40-202ENST00000357890 OLFML3Q9NRN5 406 aa10.59□□□□□ -0.71
RNF40-202ENST00000357890 SRRM3A6NNA2 597 aaPredicted RBP10.59□□□□□ -0.71
RNF40-202ENST00000357890 BFSP1Q12934 665 aa10.59□□□□□ -0.71
RNF40-202ENST00000357890 SHROOM1Q2M3G4 852 aaPredicted RBP10.59□□□□□ -0.71
RNF40-202ENST00000357890 C1orf146Q5VVC0 180 aa10.59□□□□□ -0.71
RNF40-202ENST00000357890 CCDC125Q86Z20 511 aa10.59□□□□□ -0.71
RNF40-202ENST00000357890 SLC30A5Q8TAD4 765 aa10.59□□□□□ -0.71
RNF40-202ENST00000357890 L3MBTL3Q96JM7 780 aaPredicted RBP10.59□□□□□ -0.71
RNF40-202ENST00000357890 NDNQ99608 321 aa10.59□□□□□ -0.71
RNF40-202ENST00000357890 SYT15Q9BQS2 421 aa10.59□□□□□ -0.71
RNF40-202ENST00000357890 LXNQ9BS40 222 aa10.59□□□□□ -0.71
RNF40-202ENST00000357890 PAGR1Q9BTK6 254 aa10.59□□□□□ -0.71
RNF40-202ENST00000357890 MKNK1Q9BUB5 465 aa10.59□□□□□ -0.71
RNF40-202ENST00000357890 NUP85Q9BW27 656 aa10.59□□□□□ -0.71
RNF40-202ENST00000357890 GALNT8Q9NY28 637 aa10.59□□□□□ -0.71
RNF40-202ENST00000357890 ANGPTL2Q9UKU9 493 aa10.59□□□□□ -0.71
RNF40-202ENST00000357890 PCDHA2Q9Y5H9 948 aa10.59□□□□□ -0.71
RNF40-202ENST00000357890 GTPBP10A4D1E9 387 aaKnown RBP10.58□□□□□ -0.72
RNF40-202ENST00000357890 EML1O00423 815 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 SUPT3HO75486 399 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 SPATA31C1P0DKV0 1188 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 PYGBP11216 843 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 ATP6V1C1P21283 382 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 PRKCIP41743 596 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 VAMP7P51809 220 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 EPHB1P54762 984 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 PTENP60484 403 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 PSMD6Q15008 389 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 CBWD6Q4V339 395 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 TAF1BQ53T94 588 aaPredicted RBP10.58□□□□□ -0.72
RNF40-202ENST00000357890 CBWD3Q5JTY5 395 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 CBWD5Q5RIA9 395 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 ANO7Q6IWH7 933 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 PADI6Q6TGC4 694 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.58□□□□□ -0.72
RNF40-202ENST00000357890 COL23A1Q86Y22 540 aaPredicted RBP10.58□□□□□ -0.72
RNF40-202ENST00000357890 ZNF564Q8TBZ8 553 aaPredicted RBP10.58□□□□□ -0.72
RNF40-202ENST00000357890 DTNBP1Q96EV8 351 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 KLF6Q99612 283 aaPredicted RBP10.58□□□□□ -0.72
RNF40-202ENST00000357890 KIAA1683Q9H0B3 1180 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 AGPAT3Q9NRZ7 376 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 CYP39A1Q9NYL5 469 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 SLC12A4Q9UP95 1085 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 CLRN2A0PK11 232 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 BTNL10A8MVZ5 291 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 PGM1P36871 562 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 PEX3P56589 373 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 KDSRQ06136 332 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 CEP55Q53EZ4 464 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 XKR9Q5GH70 373 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 RASSF3Q86WH2 238 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 ARL10Q8N8L6 244 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 LRRC57Q8N9N7 239 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 RBBP8NLQ8NC74 664 aaPredicted RBP10.58□□□□□ -0.72
RNF40-202ENST00000357890 GMCL1P1Q8NEA9 526 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 VTI1AQ96AJ9 217 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 CCDC97Q96F63 343 aaPredicted RBP10.58□□□□□ -0.72
RNF40-202ENST00000357890 TBC1D10AQ9BXI6 508 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 TMEM206Q9H813 350 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 DDX18Q9NVP1 670 aaKnown RBP10.58□□□□□ -0.72
RNF40-202ENST00000357890 NDE1Q9NXR1 346 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 ANAPC7Q9UJX3 599 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 LAMB1P07942 1786 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 MAGEA13PA6NCF6 341 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 CLDN3O15551 220 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 HNRNPRO43390 633 aaKnown RBP10.58□□□□□ -0.72
RNF40-202ENST00000357890 PHF2O75151 1096 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 PLS3P13797 630 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 GCLCP48506 637 aaPredicted RBP10.58□□□□□ -0.72
RNF40-202ENST00000357890 MFAP3P55082 362 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 DLGAP5Q15398 846 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 TMEM132AQ24JP5 1023 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 CDCA2Q69YH5 1023 aaPredicted RBP10.58□□□□□ -0.72
RNF40-202ENST00000357890 RNF207Q6ZRF8 634 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 RGS9BPQ6ZS82 235 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 LNX1Q8TBB1 728 aaPredicted RBP10.58□□□□□ -0.72
RNF40-202ENST00000357890 TTC17Q96AE7 1141 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 RBM41Q96IZ5 413 aaKnown RBP10.58□□□□□ -0.72
RNF40-202ENST00000357890 FNBP1Q96RU3 617 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 DCLRE1BQ9H816 532 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 SAYSD1Q9NPB0 183 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 PPARGC1AQ9UBK2 798 aaKnown RBP10.58□□□□□ -0.72
RNF40-202ENST00000357890 PHTF1Q9UMS5 762 aa10.58□□□□□ -0.72
RNF40-202ENST00000357890 ASTN1O14525 1302 aa10.57□□□□□ -0.72
RNF40-202ENST00000357890 A0A0A6YYK5 440 aaPredicted RBP10.57□□□□□ -0.72
RNF40-202ENST00000357890 GOLGA8SH3BPF8 625 aa10.57□□□□□ -0.72
RNF40-202ENST00000357890 GOLGA8MH3BSY2 632 aa10.57□□□□□ -0.72
RNF40-202ENST00000357890 IPO5O00410 1097 aaKnown RBP10.57□□□□□ -0.72
RNF40-202ENST00000357890 EDIL3O43854 480 aa10.57□□□□□ -0.72
RNF40-202ENST00000357890 DKC1O60832 514 aaKnown RBP eCLIP10.57□□□□□ -0.72
RNF40-202ENST00000357890 ATP6V1G1O75348 118 aa10.57□□□□□ -0.72
RNF40-202ENST00000357890 KRT36O76013 467 aa10.57□□□□□ -0.72
RNF40-202ENST00000357890 KITP10721 976 aa10.57□□□□□ -0.72
RNF40-202ENST00000357890 HARSP12081 509 aaKnown RBP10.57□□□□□ -0.72
RNF40-202ENST00000357890 ATP6V1B1P15313 513 aa10.57□□□□□ -0.72
RNF40-202ENST00000357890 EN1Q05925 392 aaPredicted RBP10.57□□□□□ -0.72
RNF40-202ENST00000357890 MTDHQ86UE4 582 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms