RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 KDM4CQ9H3R0 1056 aa16.45■□□□□ 0.22
TRAPPC11-202ENST00000357207 GEMIN8Q9NWZ8 242 aaKnown RBP16.45■□□□□ 0.22
TRAPPC11-202ENST00000357207 FNDC3AQ9Y2H6 1198 aaKnown RBP16.45■□□□□ 0.22
TRAPPC11-202ENST00000357207 CAMSAP1Q5T5Y3 1602 aa16.45■□□□□ 0.22
TRAPPC11-202ENST00000357207 NRXN1Q9ULB1 1477 aa16.45■□□□□ 0.22
TRAPPC11-202ENST00000357207 EFTUD2Q15029 972 aaKnown RBP eCLIP16.45■□□□□ 0.22
TRAPPC11-202ENST00000357207 CNGA3Q16281 694 aa16.45■□□□□ 0.22
TRAPPC11-202ENST00000357207 METTL23Q86XA0 190 aa16.45■□□□□ 0.22
TRAPPC11-202ENST00000357207 MRPL4Q9BYD3 311 aaKnown RBP16.45■□□□□ 0.22
TRAPPC11-202ENST00000357207 NYAP2Q9P242 653 aa16.45■□□□□ 0.22
TRAPPC11-202ENST00000357207 FOXN3O00409 490 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 KIAA0391O15091 583 aaKnown RBP16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 SLC4A1P02730 911 aa16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 NPEPPSP55786 919 aa16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 OCA2Q04671 838 aa16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 POU5F1BQ06416 359 aa16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 SUPT20HL1Q3ZLR7 823 aa16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 DPP9Q86TI2 863 aa16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 CATSPER1Q8NEC5 780 aa16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 NSL1Q96IY1 281 aa16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 ZNF302Q9NR11 478 aa16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 SLC12A6Q9UHW9 1150 aa16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 CHMP2BQ9UQN3 213 aa16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 L3MBTL1Q9Y468 752 aa16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 ZC3H13Q5T200 1668 aaKnown RBP16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 TNS3Q68CZ2 1445 aa16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 F5H423 210 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 CAMTA2O94983 1202 aa16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 TNFAIP2Q03169 654 aa16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 SMAD1Q15797 465 aaKnown RBP16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 TMTC4Q5T4D3 741 aa16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 AGR3Q8TD06 166 aa16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 ADGRB1O14514 1584 aa16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 hCG_2014768A0A024R1R8 64 aa16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 MMP10P09238 476 aa16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 RALAP11233 206 aa16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 CCNA1P78396 465 aa16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 SNRNP48Q6IEG0 339 aaKnown RBP16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 RBBP8NLQ8NC74 664 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 AENQ8WTP8 325 aaKnown RBP16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 TMEM51Q9NW97 253 aa16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 ZFXP17010 805 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 VHLP40337 213 aa16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 PTK7Q13308 1070 aa16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 PIGHQ14442 188 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 RWDD4Q6NW29 188 aaKnown RBP16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 CATSPER4Q7RTX7 472 aa16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 WDR35Q9P2L0 1181 aa16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.44■□□□□ 0.22
TRAPPC11-202ENST00000357207 TSPOAP1O95153 1857 aa16.43■□□□□ 0.22
TRAPPC11-202ENST00000357207 KCNN4O15554 427 aa16.43■□□□□ 0.22
TRAPPC11-202ENST00000357207 DNAJC6O75061 913 aa16.43■□□□□ 0.22
TRAPPC11-202ENST00000357207 ACOT2P49753 483 aa16.43■□□□□ 0.22
TRAPPC11-202ENST00000357207 TRIP10Q15642 601 aa16.43■□□□□ 0.22
TRAPPC11-202ENST00000357207 NBPF20Q3BBV1 942 aa16.43■□□□□ 0.22
TRAPPC11-202ENST00000357207 TTC39CQ8N584 583 aa16.43■□□□□ 0.22
TRAPPC11-202ENST00000357207 KCNK16Q96T55 309 aa16.43■□□□□ 0.22
TRAPPC11-202ENST00000357207 C2orf40Q9H1Z8 148 aa16.43■□□□□ 0.22
TRAPPC11-202ENST00000357207 AGPAT3Q9NRZ7 376 aa16.43■□□□□ 0.22
TRAPPC11-202ENST00000357207 XPO7Q9UIA9 1087 aaKnown RBP16.43■□□□□ 0.22
TRAPPC11-202ENST00000357207 HERC5Q9UII4 1024 aaKnown RBP16.43■□□□□ 0.22
TRAPPC11-202ENST00000357207 STAP1Q9ULZ2 295 aa16.43■□□□□ 0.22
TRAPPC11-202ENST00000357207 DGAT1O75907 488 aa16.43■□□□□ 0.22
TRAPPC11-202ENST00000357207 TARSP26639 723 aaKnown RBP16.43■□□□□ 0.22
TRAPPC11-202ENST00000357207 SESN2P58004 480 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC11-202ENST00000357207 YWHAHQ04917 246 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC11-202ENST00000357207 C16orf87Q6PH81 154 aa16.43■□□□□ 0.22
TRAPPC11-202ENST00000357207 ZNF571Q7Z3V5 609 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC11-202ENST00000357207 RNF139Q8WU17 664 aa16.43■□□□□ 0.22
TRAPPC11-202ENST00000357207 FAM217BQ9NTX9 383 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC11-202ENST00000357207 DDX20Q9UHI6 824 aaKnown RBP16.43■□□□□ 0.22
TRAPPC11-202ENST00000357207 SPAG6O75602 509 aa16.43■□□□□ 0.22
TRAPPC11-202ENST00000357207 UBOX5O94941 541 aa16.43■□□□□ 0.22
TRAPPC11-202ENST00000357207 SNRPAP09012 282 aaKnown RBP16.43■□□□□ 0.22
TRAPPC11-202ENST00000357207 RBP3P10745 1247 aa16.43■□□□□ 0.22
TRAPPC11-202ENST00000357207 MTM1Q13496 603 aa16.43■□□□□ 0.22
TRAPPC11-202ENST00000357207 SYCP2LQ5T4T6 812 aa16.43■□□□□ 0.22
TRAPPC11-202ENST00000357207 PID1Q7Z2X4 250 aa16.43■□□□□ 0.22
TRAPPC11-202ENST00000357207 ARHGEF26Q96DR7 871 aa16.43■□□□□ 0.22
TRAPPC11-202ENST00000357207 FAM193BQ96PV7 902 aaPredicted RBP16.43■□□□□ 0.22
TRAPPC11-202ENST00000357207 TMEM8AQ9HCN3 771 aa16.43■□□□□ 0.22
TRAPPC11-202ENST00000357207 WDR72Q3MJ13 1102 aa16.42■□□□□ 0.22
TRAPPC11-202ENST00000357207 EARS2Q5JPH6 523 aaKnown RBP16.42■□□□□ 0.22
TRAPPC11-202ENST00000357207 CREG2Q8IUH2 290 aa16.42■□□□□ 0.22
TRAPPC11-202ENST00000357207 MANSC1Q9H8J5 431 aa16.42■□□□□ 0.22
TRAPPC11-202ENST00000357207 PHTF1Q9UMS5 762 aa16.42■□□□□ 0.22
TRAPPC11-202ENST00000357207 SMAPO00193 183 aa16.42■□□□□ 0.22
TRAPPC11-202ENST00000357207 APOL1O14791 398 aa16.42■□□□□ 0.22
TRAPPC11-202ENST00000357207 NTSR2O95665 410 aa16.42■□□□□ 0.22
TRAPPC11-202ENST00000357207 WEE2P0C1S8 567 aa16.42■□□□□ 0.22
TRAPPC11-202ENST00000357207 PHKA2P46019 1235 aa16.42■□□□□ 0.22
TRAPPC11-202ENST00000357207 CYTH1Q15438 398 aa16.42■□□□□ 0.22
TRAPPC11-202ENST00000357207 EPC2Q52LR7 807 aa16.42■□□□□ 0.22
TRAPPC11-202ENST00000357207 MCEEQ96PE7 176 aa16.42■□□□□ 0.22
TRAPPC11-202ENST00000357207 FAM205AQ6ZU69 1335 aa16.42■□□□□ 0.22
TRAPPC11-202ENST00000357207 CEP170BQ9Y4F5 1589 aaPredicted RBP16.42■□□□□ 0.22
TRAPPC11-202ENST00000357207 FAM237AA0A1B0GTK4 181 aa16.42■□□□□ 0.22
TRAPPC11-202ENST00000357207 PIK3R2O00459 728 aa16.42■□□□□ 0.22
TRAPPC11-202ENST00000357207 AP1B1Q10567 949 aa16.42■□□□□ 0.22
TRAPPC11-202ENST00000357207 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms