RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 TMEM132DQ14C87 1099 aa19.56■□□□□ 0.72
SMARCD3-202ENST00000356800 TRIM60Q495X7 471 aa19.56■□□□□ 0.72
SMARCD3-202ENST00000356800 C1orf53Q5VUE5 145 aa19.56■□□□□ 0.72
SMARCD3-202ENST00000356800 HGSNATQ68CP4 663 aa19.56■□□□□ 0.72
SMARCD3-202ENST00000356800 SPOPLQ6IQ16 392 aa19.56■□□□□ 0.72
SMARCD3-202ENST00000356800 CCDC170Q8IYT3 715 aa19.56■□□□□ 0.72
SMARCD3-202ENST00000356800 C1orf127Q8N9H9 656 aa19.56■□□□□ 0.72
SMARCD3-202ENST00000356800 ANKLE1Q8NAG6 615 aa19.56■□□□□ 0.72
SMARCD3-202ENST00000356800 APOBEC3GQ9HC16 384 aaKnown RBP19.56■□□□□ 0.72
SMARCD3-202ENST00000356800 C2CD2Q9Y426 696 aa19.56■□□□□ 0.72
SMARCD3-202ENST00000356800 UMODL1Q5DID0 1318 aa19.55■□□□□ 0.72
SMARCD3-202ENST00000356800 GUCY2FP51841 1108 aa19.55■□□□□ 0.72
SMARCD3-202ENST00000356800 YARSP54577 528 aaKnown RBP19.55■□□□□ 0.72
SMARCD3-202ENST00000356800 MYL6P60660 151 aa19.55■□□□□ 0.72
SMARCD3-202ENST00000356800 TLE2Q04725 743 aa19.55■□□□□ 0.72
SMARCD3-202ENST00000356800 FAAP100Q0VG06 881 aa19.55■□□□□ 0.72
SMARCD3-202ENST00000356800 ARHGAP44Q17R89 818 aa19.55■□□□□ 0.72
SMARCD3-202ENST00000356800 XKR4Q5GH76 650 aa19.55■□□□□ 0.72
SMARCD3-202ENST00000356800 PPM1KQ8N3J5 372 aa19.55■□□□□ 0.72
SMARCD3-202ENST00000356800 PPP1R13BQ96KQ4 1090 aa19.55■□□□□ 0.72
SMARCD3-202ENST00000356800 RNF19AQ9NV58 838 aa19.55■□□□□ 0.72
SMARCD3-202ENST00000356800 TRMT1Q9NXH9 659 aaKnown RBP19.55■□□□□ 0.72
SMARCD3-202ENST00000356800 KLK14Q9P0G3 267 aa19.55■□□□□ 0.72
SMARCD3-202ENST00000356800 CNTN3Q9P232 1028 aa19.55■□□□□ 0.72
SMARCD3-202ENST00000356800 ARHGAP20Q9P2F6 1191 aa19.55■□□□□ 0.72
SMARCD3-202ENST00000356800 PPP2R2CQ9Y2T4 447 aa19.55■□□□□ 0.72
SMARCD3-202ENST00000356800 ADGRG1Q9Y653 693 aa19.55■□□□□ 0.72
SMARCD3-202ENST00000356800 TET1Q8NFU7 2136 aa19.54■□□□□ 0.72
SMARCD3-202ENST00000356800 MEIS3P2A8K0S8 358 aa19.54■□□□□ 0.72
SMARCD3-202ENST00000356800 PITPNM1O00562 1244 aa19.54■□□□□ 0.72
SMARCD3-202ENST00000356800 TLR3O15455 904 aaKnown RBP19.54■□□□□ 0.72
SMARCD3-202ENST00000356800 ASS1P00966 412 aaKnown RBP19.54■□□□□ 0.72
SMARCD3-202ENST00000356800 ZSCAN20P17040 1043 aaPredicted RBP19.54■□□□□ 0.72
SMARCD3-202ENST00000356800 ZBTB6Q15916 424 aa19.54■□□□□ 0.72
SMARCD3-202ENST00000356800 IRF2BP2Q7Z5L9 587 aa19.54■□□□□ 0.72
SMARCD3-202ENST00000356800 KIF12Q96FN5 646 aa19.54■□□□□ 0.72
SMARCD3-202ENST00000356800 PAWRQ96IZ0 340 aaKnown RBP19.54■□□□□ 0.72
SMARCD3-202ENST00000356800 TOX2Q96NM4 488 aa19.54■□□□□ 0.72
SMARCD3-202ENST00000356800 TRAIPQ9BWF2 469 aa19.54■□□□□ 0.72
SMARCD3-202ENST00000356800 PARP2Q9UGN5 583 aa19.54■□□□□ 0.72
SMARCD3-202ENST00000356800 DERAQ9Y315 318 aa19.54■□□□□ 0.72
SMARCD3-202ENST00000356800 NUB1Q9Y5A7 615 aa19.54■□□□□ 0.72
SMARCD3-202ENST00000356800 FOXN3O00409 490 aaPredicted RBP19.53■□□□□ 0.72
SMARCD3-202ENST00000356800 NBNO60934 754 aa19.53■□□□□ 0.72
SMARCD3-202ENST00000356800 CCDC175P0C221 793 aa19.53■□□□□ 0.72
SMARCD3-202ENST00000356800 SOX5P35711 763 aa19.53■□□□□ 0.72
SMARCD3-202ENST00000356800 NOP14P78316 857 aaKnown RBP19.53■□□□□ 0.72
SMARCD3-202ENST00000356800 ARID5AQ03989 594 aa19.53■□□□□ 0.72
SMARCD3-202ENST00000356800 ASIC2Q16515 512 aa19.53■□□□□ 0.72
SMARCD3-202ENST00000356800 WDR44Q5JSH3 913 aa19.53■□□□□ 0.72
SMARCD3-202ENST00000356800 MRPL10Q7Z7H8 261 aaKnown RBP19.53■□□□□ 0.72
SMARCD3-202ENST00000356800 NT5DC4Q86YG4 428 aa19.53■□□□□ 0.72
SMARCD3-202ENST00000356800 ARID3AQ99856 593 aa19.53■□□□□ 0.72
SMARCD3-202ENST00000356800 ADAM2Q99965 735 aa19.53■□□□□ 0.72
SMARCD3-202ENST00000356800 IFIH1Q9BYX4 1025 aaKnown RBP19.53■□□□□ 0.72
SMARCD3-202ENST00000356800 XYLT2Q9H1B5 865 aa19.53■□□□□ 0.72
SMARCD3-202ENST00000356800 NHEJ1Q9H9Q4 299 aaPredicted RBP19.53■□□□□ 0.72
SMARCD3-202ENST00000356800 C1orf112Q9NSG2 853 aa19.53■□□□□ 0.72
SMARCD3-202ENST00000356800 EPN1Q9Y6I3 576 aaPredicted RBP19.53■□□□□ 0.72
SMARCD3-202ENST00000356800 SCN1AP35498 2009 aa19.53■□□□□ 0.72
SMARCD3-202ENST00000356800 GOLGA6L9A6NEM1 432 aa19.52■□□□□ 0.72
SMARCD3-202ENST00000356800 DCDC2CA8MYV0 355 aa19.52■□□□□ 0.72
SMARCD3-202ENST00000356800 NDUFA10O95299 355 aa19.52■□□□□ 0.72
SMARCD3-202ENST00000356800 ITGB3P05106 788 aa19.52■□□□□ 0.72
SMARCD3-202ENST00000356800 ATF7P17544 494 aaPredicted RBP19.52■□□□□ 0.72
SMARCD3-202ENST00000356800 STAT1P42224 750 aa19.52■□□□□ 0.72
SMARCD3-202ENST00000356800 GCNT1Q02742 428 aa19.52■□□□□ 0.72
SMARCD3-202ENST00000356800 GLRA4Q5JXX5 417 aa19.52■□□□□ 0.72
SMARCD3-202ENST00000356800 NYAP1Q6ZVC0 841 aa19.52■□□□□ 0.72
SMARCD3-202ENST00000356800 RTN4RL1Q86UN2 441 aaPredicted RBP19.52■□□□□ 0.72
SMARCD3-202ENST00000356800 MCOLN1Q9GZU1 580 aa19.52■□□□□ 0.72
SMARCD3-202ENST00000356800 C11orf49Q9H6J7 331 aa19.52■□□□□ 0.72
SMARCD3-202ENST00000356800 SMIM28A0A1B0GU29 152 aa19.52■□□□□ 0.71
SMARCD3-202ENST00000356800 SSU72P8A0A1W2PR75 194 aa19.52■□□□□ 0.71
SMARCD3-202ENST00000356800 ZNF623O75123 536 aa19.52■□□□□ 0.71
SMARCD3-202ENST00000356800 GFPT2O94808 682 aa19.52■□□□□ 0.71
SMARCD3-202ENST00000356800 SERPING1P05155 500 aa19.52■□□□□ 0.71
SMARCD3-202ENST00000356800 KCNE1P15382 129 aa19.52■□□□□ 0.71
SMARCD3-202ENST00000356800 MFAP3P55082 362 aa19.52■□□□□ 0.71
SMARCD3-202ENST00000356800 TRPC3Q13507 836 aa19.52■□□□□ 0.71
SMARCD3-202ENST00000356800 REXO1L1PQ8IX06 675 aa19.52■□□□□ 0.71
SMARCD3-202ENST00000356800 LINC01599Q8WXQ3 324 aa19.52■□□□□ 0.71
SMARCD3-202ENST00000356800 SHC3Q92529 594 aa19.52■□□□□ 0.71
SMARCD3-202ENST00000356800 LPPQ93052 612 aa19.52■□□□□ 0.71
SMARCD3-202ENST00000356800 C18orf25Q96B23 403 aaPredicted RBP19.52■□□□□ 0.71
SMARCD3-202ENST00000356800 DESI2Q9BSY9 194 aa19.52■□□□□ 0.71
SMARCD3-202ENST00000356800 PRDM10Q9NQV6 1147 aa19.52■□□□□ 0.71
SMARCD3-202ENST00000356800 DPP3Q9NY33 737 aa19.52■□□□□ 0.71
SMARCD3-202ENST00000356800 TUBGCP4Q9UGJ1 667 aa19.52■□□□□ 0.71
SMARCD3-202ENST00000356800 A0A0U1RQF3 1178 aa19.51■□□□□ 0.71
SMARCD3-202ENST00000356800 EVI5O60447 810 aa19.51■□□□□ 0.71
SMARCD3-202ENST00000356800 ITGA4P13612 1032 aa19.51■□□□□ 0.71
SMARCD3-202ENST00000356800 CYLC1P35663 651 aaPredicted RBP19.51■□□□□ 0.71
SMARCD3-202ENST00000356800 EIF4A3P38919 411 aaKnown RBP19.51■□□□□ 0.71
SMARCD3-202ENST00000356800 PRKCIP41743 596 aa19.51■□□□□ 0.71
SMARCD3-202ENST00000356800 MAPK8IP2Q13387 824 aaPredicted RBP19.51■□□□□ 0.71
SMARCD3-202ENST00000356800 SGSM1Q2NKQ1 1148 aa19.51■□□□□ 0.71
SMARCD3-202ENST00000356800 AGMOQ6ZNB7 445 aa19.51■□□□□ 0.71
SMARCD3-202ENST00000356800 FMNL3Q8IVF7 1028 aa19.51■□□□□ 0.71
SMARCD3-202ENST00000356800 CCDC42Q96M95 316 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms