RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 PCSK1NQ9UHG2 260 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 VPS9D1Q9Y2B5 631 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 USP31Q70CQ4 1352 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 KIF1BO60333 1816 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 PVALEFA0A1B0GWK0 134 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 HEATR9A2RTY3 570 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 DCDC2CA8MYV0 355 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 DIAPH2O60879 1101 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 CHRM1P11229 460 aaPredicted RBP5.82□□□□□ -1.48
PTPRD-202ENST00000356435 RGS2P41220 211 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 SERPINB10P48595 397 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 CDH18Q13634 790 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 DMC1Q14565 340 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 LLGL1Q15334 1064 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 NBPF9Q3BBW0 867 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 RESP18Q5W5W9 173 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 YTHDF3Q7Z739 585 aaKnown RBP5.82□□□□□ -1.48
PTPRD-202ENST00000356435 CATSPERBQ9H7T0 1116 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 TUFT1Q9NNX1 390 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 ZFATQ9P243 1243 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 PLAAQ9Y263 795 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 PRR23D1E9PI22 279 aaPredicted RBP5.82□□□□□ -1.48
PTPRD-202ENST00000356435 CELF2O95319 508 aaKnown RBP5.82□□□□□ -1.48
PTPRD-202ENST00000356435 MMEP08473 750 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 PRR23D2P0DMB1 279 aaPredicted RBP5.82□□□□□ -1.48
PTPRD-202ENST00000356435 CDH6P55285 790 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 KNOP1Q1ED39 458 aaKnown RBP5.82□□□□□ -1.48
PTPRD-202ENST00000356435 DPCR1Q3MIW9 517 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 WNT8AQ9H1J5 351 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 RPRD1BQ9NQG5 326 aaKnown RBP5.82□□□□□ -1.48
PTPRD-202ENST00000356435 LATS2Q9NRM7 1088 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 MFAP3LO75121 409 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 GGPS1O95749 300 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 SCP2P22307 547 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 PLD1Q13393 1074 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 KIZQ2M2Z5 673 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 ZNF555Q8NEP9 628 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 CALML6Q8TD86 181 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 ZNF556Q9HAH1 456 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 ADA2Q9NZK5 511 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 NOVA2Q9UNW9 492 aaKnown RBP5.82□□□□□ -1.48
PTPRD-202ENST00000356435 CPDO75976 1380 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 C17orf102A2RUQ5 167 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 CLASP2O75122 1294 aaKnown RBP5.82□□□□□ -1.48
PTPRD-202ENST00000356435 HAUS5O94927 633 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 GUCA1CO95843 209 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 ATP1A1P05023 1023 aaKnown RBP5.82□□□□□ -1.48
PTPRD-202ENST00000356435 RPLP2P05387 115 aaKnown RBP5.82□□□□□ -1.48
PTPRD-202ENST00000356435 ODC1P11926 461 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 IL10P22301 178 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 YWHABP31946 246 aaKnown RBP5.82□□□□□ -1.48
PTPRD-202ENST00000356435 CENPAP49450 140 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 AMPD2Q01433 879 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 TMED1Q13445 227 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 TOB2Q14106 344 aaPredicted RBP5.82□□□□□ -1.48
PTPRD-202ENST00000356435 DGKDQ16760 1214 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 CCDC157Q569K6 752 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 LRRC8EQ6NSJ5 796 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 EFL1Q7Z2Z2 1120 aaKnown RBP5.82□□□□□ -1.48
PTPRD-202ENST00000356435 CATSPER3Q86XQ3 398 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 CINPQ9BW66 212 aaPredicted RBP5.82□□□□□ -1.48
PTPRD-202ENST00000356435 DPP7Q9UHL4 492 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 GGA2Q9UJY4 613 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 RNF103-CHMP3A0A140T963 221 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 MCAMP43121 646 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 ALDH7A1P49419 539 aaKnown RBP5.82□□□□□ -1.48
PTPRD-202ENST00000356435 RGS4P49798 205 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 DPYDQ12882 1025 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 MRPL28Q13084 256 aaKnown RBP5.82□□□□□ -1.48
PTPRD-202ENST00000356435 PDIA2Q13087 525 aaKnown RBP5.82□□□□□ -1.48
PTPRD-202ENST00000356435 MAPRE1Q15691 268 aaKnown RBP5.82□□□□□ -1.48
PTPRD-202ENST00000356435 TRIM65Q6PJ69 517 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 TTLL11Q8NHH1 800 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 SAAL1Q96ER3 474 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 NUDT12Q9BQG2 462 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 PITPNM3Q9BZ71 974 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 CD209Q9NNX6 404 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 TMEM161AQ9NX61 479 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 JCADQ9P266 1359 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 CYP2D6P10635 497 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 SLC1A1P43005 524 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 MAP3K7CLP57077 242 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 GPS1Q13098 491 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 EMC2Q15006 297 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 REXO1L1PQ8IX06 675 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 PPM1NQ8N819 430 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 AGXT2Q9BYV1 514 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 CD274Q9NZQ7 290 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 SLC25A13Q9UJS0 675 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 SLC30A1Q9Y6M5 507 aa5.82□□□□□ -1.48
PTPRD-202ENST00000356435 ERCC6L2Q5T890 1561 aa5.81□□□□□ -1.48
PTPRD-202ENST00000356435 NDUFS3O75489 264 aa5.81□□□□□ -1.48
PTPRD-202ENST00000356435 PALMO75781 387 aa5.81□□□□□ -1.48
PTPRD-202ENST00000356435 KRT14P02533 472 aa5.81□□□□□ -1.48
PTPRD-202ENST00000356435 SLC2A3P11169 496 aa5.81□□□□□ -1.48
PTPRD-202ENST00000356435 CXCR5P32302 372 aa5.81□□□□□ -1.48
PTPRD-202ENST00000356435 NCKAP1LP55160 1127 aa5.81□□□□□ -1.48
PTPRD-202ENST00000356435 DAB2P98082 770 aa5.81□□□□□ -1.48
PTPRD-202ENST00000356435 COG2Q14746 738 aa5.81□□□□□ -1.48
PTPRD-202ENST00000356435 IL31Q6EBC2 164 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms