RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 CCDC172P0C7W6 258 aa10.35□□□□□ -0.75
NPHP1-202ENST00000355301 COL6A1P12109 1028 aa10.35□□□□□ -0.75
NPHP1-202ENST00000355301 ZSCAN20P17040 1043 aaPredicted RBP10.35□□□□□ -0.75
NPHP1-202ENST00000355301 CYLC1P35663 651 aaPredicted RBP10.35□□□□□ -0.75
NPHP1-202ENST00000355301 GJA8P48165 433 aa10.35□□□□□ -0.75
NPHP1-202ENST00000355301 NOP14P78316 857 aaKnown RBP10.35□□□□□ -0.75
NPHP1-202ENST00000355301 KLHL30Q0D2K2 578 aa10.35□□□□□ -0.75
NPHP1-202ENST00000355301 BFSP2Q13515 415 aa10.35□□□□□ -0.75
NPHP1-202ENST00000355301 ARHGAP44Q17R89 818 aa10.35□□□□□ -0.75
NPHP1-202ENST00000355301 SGSM1Q2NKQ1 1148 aa10.35□□□□□ -0.75
NPHP1-202ENST00000355301 ASTE1Q2TB18 679 aaPredicted RBP10.35□□□□□ -0.75
NPHP1-202ENST00000355301 C1orf53Q5VUE5 145 aa10.35□□□□□ -0.75
NPHP1-202ENST00000355301 C1orf127Q8N9H9 656 aa10.35□□□□□ -0.75
NPHP1-202ENST00000355301 ANKLE1Q8NAG6 615 aa10.35□□□□□ -0.75
NPHP1-202ENST00000355301 CXorf38Q8TB03 319 aa10.35□□□□□ -0.75
NPHP1-202ENST00000355301 SHC3Q92529 594 aa10.35□□□□□ -0.75
NPHP1-202ENST00000355301 JAKMIP2Q96AA8 810 aa10.35□□□□□ -0.75
NPHP1-202ENST00000355301 CCDC42Q96M95 316 aa10.35□□□□□ -0.75
NPHP1-202ENST00000355301 APOBEC3GQ9HC16 384 aaKnown RBP10.35□□□□□ -0.75
NPHP1-202ENST00000355301 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.35□□□□□ -0.75
NPHP1-202ENST00000355301 FAM105AQ9NUU6 356 aa10.35□□□□□ -0.75
NPHP1-202ENST00000355301 SIX4Q9UIU6 781 aa10.35□□□□□ -0.75
NPHP1-202ENST00000355301 PPP2R2CQ9Y2T4 447 aa10.35□□□□□ -0.75
NPHP1-202ENST00000355301 PCDHB2Q9Y5E7 798 aa10.35□□□□□ -0.75
NPHP1-202ENST00000355301 ADGRG1Q9Y653 693 aa10.35□□□□□ -0.75
NPHP1-202ENST00000355301 USP27XA6NNY8 438 aa10.34□□□□□ -0.75
NPHP1-202ENST00000355301 EIF3CLB5ME19 914 aaKnown RBP10.34□□□□□ -0.75
NPHP1-202ENST00000355301 ZSCAN12O43309 604 aa10.34□□□□□ -0.75
NPHP1-202ENST00000355301 ZNF623O75123 536 aa10.34□□□□□ -0.75
NPHP1-202ENST00000355301 GFPT2O94808 682 aa10.34□□□□□ -0.75
NPHP1-202ENST00000355301 LCA5LO95447 670 aa10.34□□□□□ -0.75
NPHP1-202ENST00000355301 CCDC175P0C221 793 aa10.34□□□□□ -0.75
NPHP1-202ENST00000355301 PNMA6AP0CW24 399 aaPredicted RBP10.34□□□□□ -0.75
NPHP1-202ENST00000355301 AKAP5P24588 427 aa10.34□□□□□ -0.75
NPHP1-202ENST00000355301 EIF4A3P38919 411 aaKnown RBP10.34□□□□□ -0.75
NPHP1-202ENST00000355301 MYL6P60660 151 aa10.34□□□□□ -0.75
NPHP1-202ENST00000355301 ARID5AQ03989 594 aa10.34□□□□□ -0.75
NPHP1-202ENST00000355301 TRPC3Q13507 836 aa10.34□□□□□ -0.75
NPHP1-202ENST00000355301 DSC3Q14574 896 aa10.34□□□□□ -0.75
NPHP1-202ENST00000355301 MBTPS1Q14703 1052 aa10.34□□□□□ -0.75
NPHP1-202ENST00000355301 ZBTB6Q15916 424 aa10.34□□□□□ -0.75
NPHP1-202ENST00000355301 SCARA3Q6AZY7 606 aa10.34□□□□□ -0.75
NPHP1-202ENST00000355301 SMYD5Q6GMV2 418 aa10.34□□□□□ -0.75
NPHP1-202ENST00000355301 SLC39A5Q6ZMH5 540 aa10.34□□□□□ -0.75
NPHP1-202ENST00000355301 FAM71AQ8IYT1 594 aa10.34□□□□□ -0.75
NPHP1-202ENST00000355301 TAF4BQ92750 862 aa10.34□□□□□ -0.75
NPHP1-202ENST00000355301 KAT5Q92993 513 aa10.34□□□□□ -0.75
NPHP1-202ENST00000355301 KIF12Q96FN5 646 aa10.34□□□□□ -0.75
NPHP1-202ENST00000355301 ZMAT2Q96NC0 199 aaKnown RBP10.34□□□□□ -0.75
NPHP1-202ENST00000355301 TOX2Q96NM4 488 aa10.34□□□□□ -0.75
NPHP1-202ENST00000355301 EIF3CQ99613 913 aaKnown RBP10.34□□□□□ -0.75
NPHP1-202ENST00000355301 DESI2Q9BSY9 194 aa10.34□□□□□ -0.75
NPHP1-202ENST00000355301 XYLT2Q9H1B5 865 aa10.34□□□□□ -0.75
NPHP1-202ENST00000355301 CXCL16Q9H2A7 254 aa10.34□□□□□ -0.75
NPHP1-202ENST00000355301 RNF39Q9H2S5 420 aa10.34□□□□□ -0.75
NPHP1-202ENST00000355301 HAUS4Q9H6D7 363 aa10.34□□□□□ -0.75
NPHP1-202ENST00000355301 ITGA11Q9UKX5 1188 aa10.34□□□□□ -0.75
NPHP1-202ENST00000355301 TRIP11Q15643 1979 aa10.34□□□□□ -0.75
NPHP1-202ENST00000355301 PDCD11Q14690 1871 aaKnown RBP10.34□□□□□ -0.75
NPHP1-202ENST00000355301 RBAK-RBAKDNI3L0D1 243 aa10.33□□□□□ -0.76
NPHP1-202ENST00000355301 KCNE1P15382 129 aa10.33□□□□□ -0.76
NPHP1-202ENST00000355301 SELPP16109 830 aa10.33□□□□□ -0.76
NPHP1-202ENST00000355301 TBXAS1P24557 533 aaPredicted RBP10.33□□□□□ -0.76
NPHP1-202ENST00000355301 ANXA13P27216 316 aa10.33□□□□□ -0.76
NPHP1-202ENST00000355301 RAB27AP51159 221 aa10.33□□□□□ -0.76
NPHP1-202ENST00000355301 KIF11P52732 1056 aa10.33□□□□□ -0.76
NPHP1-202ENST00000355301 PTK2Q05397 1052 aa10.33□□□□□ -0.76
NPHP1-202ENST00000355301 CUL2Q13617 745 aa10.33□□□□□ -0.76
NPHP1-202ENST00000355301 TDRD12Q587J7 1177 aaKnown RBP10.33□□□□□ -0.76
NPHP1-202ENST00000355301 SPOPLQ6IQ16 392 aa10.33□□□□□ -0.76
NPHP1-202ENST00000355301 LRRC8DQ7L1W4 858 aa10.33□□□□□ -0.76
NPHP1-202ENST00000355301 HACE1Q8IYU2 909 aa10.33□□□□□ -0.76
NPHP1-202ENST00000355301 ELMO3Q96BJ8 720 aa10.33□□□□□ -0.76
NPHP1-202ENST00000355301 FAXDC2Q96IV6 333 aa10.33□□□□□ -0.76
NPHP1-202ENST00000355301 PPP1R13BQ96KQ4 1090 aa10.33□□□□□ -0.76
NPHP1-202ENST00000355301 APOL6Q9BWW8 343 aa10.33□□□□□ -0.76
NPHP1-202ENST00000355301 DEF6Q9H4E7 631 aa10.33□□□□□ -0.76
NPHP1-202ENST00000355301 VRTNQ9H8Y1 702 aa10.33□□□□□ -0.76
NPHP1-202ENST00000355301 TRMT1Q9NXH9 659 aaKnown RBP10.33□□□□□ -0.76
NPHP1-202ENST00000355301 NUB1Q9Y5A7 615 aa10.33□□□□□ -0.76
NPHP1-202ENST00000355301 A0A0U1RQF3 1178 aa10.33□□□□□ -0.76
NPHP1-202ENST00000355301 SMIM28A0A1B0GU29 152 aa10.33□□□□□ -0.76
NPHP1-202ENST00000355301 TLR3O15455 904 aaKnown RBP10.33□□□□□ -0.76
NPHP1-202ENST00000355301 AKR1B10O60218 316 aa10.33□□□□□ -0.76
NPHP1-202ENST00000355301 MGEA5O60502 916 aa10.33□□□□□ -0.76
NPHP1-202ENST00000355301 PQBP1O60828 265 aaKnown RBP10.33□□□□□ -0.76
NPHP1-202ENST00000355301 STAU1O95793 577 aaKnown RBP10.33□□□□□ -0.76
NPHP1-202ENST00000355301 ITGB3P05106 788 aa10.33□□□□□ -0.76
NPHP1-202ENST00000355301 CAPN2P17655 700 aa10.33□□□□□ -0.76
NPHP1-202ENST00000355301 ATICP31939 592 aa10.33□□□□□ -0.76
NPHP1-202ENST00000355301 KRT83P78385 493 aa10.33□□□□□ -0.76
NPHP1-202ENST00000355301 ZNF699Q32M78 642 aa10.33□□□□□ -0.76
NPHP1-202ENST00000355301 FAM43BQ6ZT52 329 aaPredicted RBP10.33□□□□□ -0.76
NPHP1-202ENST00000355301 ZNF571Q7Z3V5 609 aaPredicted RBP10.33□□□□□ -0.76
NPHP1-202ENST00000355301 MRPL10Q7Z7H8 261 aaKnown RBP10.33□□□□□ -0.76
NPHP1-202ENST00000355301 GPIHBP1Q8IV16 184 aa10.33□□□□□ -0.76
NPHP1-202ENST00000355301 REXO1L1PQ8IX06 675 aa10.33□□□□□ -0.76
NPHP1-202ENST00000355301 ACRBPQ8NEB7 543 aa10.33□□□□□ -0.76
NPHP1-202ENST00000355301 ARID3AQ99856 593 aa10.33□□□□□ -0.76
NPHP1-202ENST00000355301 IFIH1Q9BYX4 1025 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms