RNA–Protein interactions for RNA: ENST00000354506.10

RPE-201, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 3,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-201ENST00000354506 TBX20Q9UMR3 447 aa10.24□□□□□ -0.77
RPE-201ENST00000354506 AFF2P51816 1311 aa10.24□□□□□ -0.77
RPE-201ENST00000354506 LGR5O75473 907 aa10.24□□□□□ -0.77
RPE-201ENST00000354506 ITIH2P19823 946 aa10.24□□□□□ -0.77
RPE-201ENST00000354506 GTF2H1P32780 548 aa10.24□□□□□ -0.77
RPE-201ENST00000354506 SESN3P58005 492 aa10.24□□□□□ -0.77
RPE-201ENST00000354506 SNRNP35Q16560 246 aaKnown RBP10.24□□□□□ -0.77
RPE-201ENST00000354506 CLEC16AQ2KHT3 1053 aa10.24□□□□□ -0.77
RPE-201ENST00000354506 KAZNQ674X7 775 aa10.24□□□□□ -0.77
RPE-201ENST00000354506 SLC39A4Q6P5W5 647 aa10.24□□□□□ -0.77
RPE-201ENST00000354506 C15orf39Q6ZRI6 1047 aa10.24□□□□□ -0.77
RPE-201ENST00000354506 ERICH1Q86X53 443 aa10.24□□□□□ -0.77
RPE-201ENST00000354506 RELL1Q8IUW5 271 aa10.24□□□□□ -0.77
RPE-201ENST00000354506 TMC2Q8TDI7 906 aa10.24□□□□□ -0.77
RPE-201ENST00000354506 KLHL29Q96CT2 875 aa10.24□□□□□ -0.77
RPE-201ENST00000354506 RMDN2Q96LZ7 410 aa10.24□□□□□ -0.77
RPE-201ENST00000354506 PASKQ96RG2 1323 aa10.24□□□□□ -0.77
RPE-201ENST00000354506 GMLQ99445 158 aa10.24□□□□□ -0.77
RPE-201ENST00000354506 CDC42EP4Q9H3Q1 356 aaKnown RBP10.24□□□□□ -0.77
RPE-201ENST00000354506 C10orf88Q9H8K7 445 aa10.24□□□□□ -0.77
RPE-201ENST00000354506 FBXO28Q9NVF7 368 aa10.24□□□□□ -0.77
RPE-201ENST00000354506 TRPC5Q9UL62 973 aaPredicted RBP10.24□□□□□ -0.77
RPE-201ENST00000354506 MROH7Q68CQ1 1323 aa10.24□□□□□ -0.77
RPE-201ENST00000354506 ENO4A6NNW6 628 aa10.24□□□□□ -0.77
RPE-201ENST00000354506 SNX3O60493 162 aa10.24□□□□□ -0.77
RPE-201ENST00000354506 CLDN10P78369 228 aa10.24□□□□□ -0.77
RPE-201ENST00000354506 KLF1Q13351 362 aaPredicted RBP10.24□□□□□ -0.77
RPE-201ENST00000354506 PTK6Q13882 451 aa10.24□□□□□ -0.77
RPE-201ENST00000354506 NAIF1Q69YI7 327 aaPredicted RBP10.24□□□□□ -0.77
RPE-201ENST00000354506 RFX8Q6ZV50 586 aa10.24□□□□□ -0.77
RPE-201ENST00000354506 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.24□□□□□ -0.77
RPE-201ENST00000354506 MAP4K3Q8IVH8 894 aa10.24□□□□□ -0.77
RPE-201ENST00000354506 GLIS2Q9BZE0 524 aaPredicted RBP10.24□□□□□ -0.77
RPE-201ENST00000354506 EURLQ9NYK6 297 aa10.24□□□□□ -0.77
RPE-201ENST00000354506 GOLGA8SH3BPF8 625 aa10.23□□□□□ -0.77
RPE-201ENST00000354506 GOLGA8MH3BSY2 632 aa10.23□□□□□ -0.77
RPE-201ENST00000354506 ECEL1O95672 775 aa10.23□□□□□ -0.77
RPE-201ENST00000354506 KRT5P13647 590 aa10.23□□□□□ -0.77
RPE-201ENST00000354506 HMGB2P26583 209 aaKnown RBP10.23□□□□□ -0.77
RPE-201ENST00000354506 PTP4A2Q12974 167 aa10.23□□□□□ -0.77
RPE-201ENST00000354506 SYDE1Q6ZW31 735 aaPredicted RBP10.23□□□□□ -0.77
RPE-201ENST00000354506 ZNF653Q96CK0 615 aa10.23□□□□□ -0.77
RPE-201ENST00000354506 IWS1Q96ST2 819 aa10.23□□□□□ -0.77
RPE-201ENST00000354506 RAB20Q9NX57 234 aa10.23□□□□□ -0.77
RPE-201ENST00000354506 MAP3K20Q9NYL2 800 aaKnown RBP10.23□□□□□ -0.77
RPE-201ENST00000354506 ZNF70Q9UC06 446 aaPredicted RBP10.23□□□□□ -0.77
RPE-201ENST00000354506 PRKAG3Q9UGI9 489 aa10.23□□□□□ -0.77
RPE-201ENST00000354506 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.23□□□□□ -0.77
RPE-201ENST00000354506 MYPNQ86TC9 1320 aa10.23□□□□□ -0.77
RPE-201ENST00000354506 POC1B-GALNT4F8VUJ3 575 aa10.23□□□□□ -0.77
RPE-201ENST00000354506 PI4K2BG5E9Z4 385 aa10.23□□□□□ -0.77
RPE-201ENST00000354506 NFIBO00712 420 aa10.23□□□□□ -0.77
RPE-201ENST00000354506 SLC16A4O15374 487 aa10.23□□□□□ -0.77
RPE-201ENST00000354506 BANF1O75531 89 aa10.23□□□□□ -0.77
RPE-201ENST00000354506 STBD1O95210 358 aa10.23□□□□□ -0.77
RPE-201ENST00000354506 CNGA1P29973 690 aa10.23□□□□□ -0.77
RPE-201ENST00000354506 CCDC142Q17RM4 750 aa10.23□□□□□ -0.77
RPE-201ENST00000354506 SUPT20HQ8NEM7 779 aa10.23□□□□□ -0.77
RPE-201ENST00000354506 DDX27Q96GQ7 796 aaKnown RBP10.23□□□□□ -0.77
RPE-201ENST00000354506 STMN4Q9H169 189 aaPredicted RBP10.23□□□□□ -0.77
RPE-201ENST00000354506 SLCO1B3Q9NPD5 702 aa10.23□□□□□ -0.77
RPE-201ENST00000354506 PDLIM7Q9NR12 457 aa10.23□□□□□ -0.77
RPE-201ENST00000354506 FER1L6Q2WGJ9 1857 aa10.23□□□□□ -0.77
RPE-201ENST00000354506 TCP10L2B9ZVM9 353 aa10.22□□□□□ -0.77
RPE-201ENST00000354506 C21orf2O43822 256 aa10.22□□□□□ -0.77
RPE-201ENST00000354506 TTC4O95801 387 aa10.22□□□□□ -0.77
RPE-201ENST00000354506 CETPP11597 493 aa10.22□□□□□ -0.77
RPE-201ENST00000354506 PEX3P56589 373 aa10.22□□□□□ -0.77
RPE-201ENST00000354506 GCNT1Q02742 428 aa10.22□□□□□ -0.77
RPE-201ENST00000354506 RIPK1Q13546 671 aa10.22□□□□□ -0.77
RPE-201ENST00000354506 DGKZQ13574 1117 aa10.22□□□□□ -0.77
RPE-201ENST00000354506 TAOK1Q7L7X3 1001 aa10.22□□□□□ -0.77
RPE-201ENST00000354506 TAS1R2Q8TE23 839 aa10.22□□□□□ -0.77
RPE-201ENST00000354506 TAOK3Q9H2K8 898 aa10.22□□□□□ -0.77
RPE-201ENST00000354506 AVENQ9NQS1 362 aaPredicted RBP10.22□□□□□ -0.77
RPE-201ENST00000354506 ANKEF1Q9NU02 776 aa10.22□□□□□ -0.77
RPE-201ENST00000354506 TBC1D22BQ9NU19 505 aa10.22□□□□□ -0.77
RPE-201ENST00000354506 ARID2Q68CP9 1835 aa10.22□□□□□ -0.77
RPE-201ENST00000354506 ATP9AO75110 1047 aa10.22□□□□□ -0.77
RPE-201ENST00000354506 CYP1A1P04798 512 aaPredicted RBP10.22□□□□□ -0.77
RPE-201ENST00000354506 PDHA1P08559 390 aa10.22□□□□□ -0.77
RPE-201ENST00000354506 ALADP13716 330 aa10.22□□□□□ -0.77
RPE-201ENST00000354506 NPTX2P47972 431 aa10.22□□□□□ -0.77
RPE-201ENST00000354506 KRT17Q04695 432 aa10.22□□□□□ -0.77
RPE-201ENST00000354506 TMED2Q15363 201 aa10.22□□□□□ -0.77
RPE-201ENST00000354506 SPDYE2Q495Y8 402 aa10.22□□□□□ -0.77
RPE-201ENST00000354506 SV2AQ7L0J3 742 aa10.22□□□□□ -0.77
RPE-201ENST00000354506 CDAN1Q8IWY9 1227 aa10.22□□□□□ -0.77
RPE-201ENST00000354506 MCOLN2Q8IZK6 566 aa10.22□□□□□ -0.77
RPE-201ENST00000354506 CPXCR1Q8N123 301 aa10.22□□□□□ -0.77
RPE-201ENST00000354506 C4orf33Q8N1A6 199 aa10.22□□□□□ -0.77
RPE-201ENST00000354506 OGFOD1Q8N543 542 aa10.22□□□□□ -0.77
RPE-201ENST00000354506 FBXL13Q8NEE6 735 aa10.22□□□□□ -0.77
RPE-201ENST00000354506 CPA5Q8WXQ8 436 aa10.22□□□□□ -0.77
RPE-201ENST00000354506 MIEF2Q96C03 454 aa10.22□□□□□ -0.77
RPE-201ENST00000354506 KLF6Q99612 283 aaPredicted RBP10.22□□□□□ -0.77
RPE-201ENST00000354506 R3HDM2Q9Y2K5 976 aaKnown RBP10.22□□□□□ -0.77
RPE-201ENST00000354506 CLRN2A0PK11 232 aa10.22□□□□□ -0.77
RPE-201ENST00000354506 CCNE2O96020 404 aa10.22□□□□□ -0.77
RPE-201ENST00000354506 ZSCAN5DPP0CG00 497 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms