RNA–Protein interactions for RNA: ENST00000350887.5

SNRNP35-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNRNP35, Length 942 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-201ENST00000350887 SNX27Q96L92 541 aa12.49□□□□□ -0.41
SNRNP35-201ENST00000350887 KREMEN1Q96MU8 473 aa12.49□□□□□ -0.41
SNRNP35-201ENST00000350887 EIF2AQ9BY44 585 aaKnown RBP12.49□□□□□ -0.41
SNRNP35-201ENST00000350887 IFIH1Q9BYX4 1025 aaKnown RBP12.49□□□□□ -0.41
SNRNP35-201ENST00000350887 TRMT13Q9NUP7 481 aaKnown RBP12.49□□□□□ -0.41
SNRNP35-201ENST00000350887 SNTG2Q9NY99 539 aa12.49□□□□□ -0.41
SNRNP35-201ENST00000350887 DERAQ9Y315 318 aa12.49□□□□□ -0.41
SNRNP35-201ENST00000350887 REXO2Q9Y3B8 237 aaKnown RBP12.49□□□□□ -0.41
SNRNP35-201ENST00000350887 C2CD2Q9Y426 696 aa12.49□□□□□ -0.41
SNRNP35-201ENST00000350887 PCDHA13Q9Y5I0 950 aa12.49□□□□□ -0.41
SNRNP35-201ENST00000350887 MYH10P35580 1976 aa12.49□□□□□ -0.41
SNRNP35-201ENST00000350887 RBAK-RBAKDNI3L0D1 243 aa12.48□□□□□ -0.41
SNRNP35-201ENST00000350887 ARVCFO00192 962 aa12.48□□□□□ -0.41
SNRNP35-201ENST00000350887 FOXN3O00409 490 aaPredicted RBP12.48□□□□□ -0.41
SNRNP35-201ENST00000350887 XPOTO43592 962 aaKnown RBP12.48□□□□□ -0.41
SNRNP35-201ENST00000350887 KIF5CO60282 957 aa12.48□□□□□ -0.41
SNRNP35-201ENST00000350887 RECQL4O94761 1208 aa12.48□□□□□ -0.41
SNRNP35-201ENST00000350887 ASS1P00966 412 aaKnown RBP12.48□□□□□ -0.41
SNRNP35-201ENST00000350887 CHRNA1P02708 482 aa12.48□□□□□ -0.41
SNRNP35-201ENST00000350887 KRT19P08727 400 aa12.48□□□□□ -0.41
SNRNP35-201ENST00000350887 CCL5P13501 91 aa12.48□□□□□ -0.41
SNRNP35-201ENST00000350887 KRT5P13647 590 aa12.48□□□□□ -0.41
SNRNP35-201ENST00000350887 TNFAIP3P21580 790 aa12.48□□□□□ -0.41
SNRNP35-201ENST00000350887 PDE6CP51160 858 aa12.48□□□□□ -0.41
SNRNP35-201ENST00000350887 MYL6P60660 151 aa12.48□□□□□ -0.41
SNRNP35-201ENST00000350887 CYP27A1Q02318 531 aa12.48□□□□□ -0.41
SNRNP35-201ENST00000350887 GFPT1Q06210 699 aaPredicted RBP12.48□□□□□ -0.41
SNRNP35-201ENST00000350887 KIF5AQ12840 1032 aa12.48□□□□□ -0.41
SNRNP35-201ENST00000350887 NFX1Q12986 1120 aaKnown RBP12.48□□□□□ -0.41
SNRNP35-201ENST00000350887 CUL2Q13617 745 aa12.48□□□□□ -0.41
SNRNP35-201ENST00000350887 BMS1Q14692 1282 aaKnown RBP12.48□□□□□ -0.41
SNRNP35-201ENST00000350887 CCDC122Q5T0U0 273 aa12.48□□□□□ -0.41
SNRNP35-201ENST00000350887 SPOPLQ6IQ16 392 aa12.48□□□□□ -0.41
SNRNP35-201ENST00000350887 ZNF662Q6ZS27 426 aa12.48□□□□□ -0.41
SNRNP35-201ENST00000350887 ZNF571Q7Z3V5 609 aaPredicted RBP12.48□□□□□ -0.41
SNRNP35-201ENST00000350887 SLC43A3Q8NBI5 491 aa12.48□□□□□ -0.41
SNRNP35-201ENST00000350887 ZNF592Q92610 1267 aa12.48□□□□□ -0.41
SNRNP35-201ENST00000350887 TSPAN18Q96SJ8 248 aa12.48□□□□□ -0.41
SNRNP35-201ENST00000350887 APOL6Q9BWW8 343 aa12.48□□□□□ -0.41
SNRNP35-201ENST00000350887 RNF208Q9H0X6 261 aa12.48□□□□□ -0.41
SNRNP35-201ENST00000350887 PAK6Q9NQU5 681 aaPredicted RBP12.48□□□□□ -0.41
SNRNP35-201ENST00000350887 CHST12Q9NRB3 414 aa12.48□□□□□ -0.41
SNRNP35-201ENST00000350887 PARP2Q9UGN5 583 aa12.48□□□□□ -0.41
SNRNP35-201ENST00000350887 ATP8B3O60423 1300 aa12.47□□□□□ -0.41
SNRNP35-201ENST00000350887 A0A087X0T9 212 aa12.47□□□□□ -0.41
SNRNP35-201ENST00000350887 MYCP01106 439 aaPredicted RBP12.47□□□□□ -0.41
SNRNP35-201ENST00000350887 FAM228BP0C875 321 aa12.47□□□□□ -0.41
SNRNP35-201ENST00000350887 GHRP10912 638 aa12.47□□□□□ -0.41
SNRNP35-201ENST00000350887 ZSCAN20P17040 1043 aaPredicted RBP12.47□□□□□ -0.41
SNRNP35-201ENST00000350887 BPIFB4P59827 614 aa12.47□□□□□ -0.41
SNRNP35-201ENST00000350887 GNG11P61952 73 aa12.47□□□□□ -0.41
SNRNP35-201ENST00000350887 ETF1P62495 437 aaKnown RBP12.47□□□□□ -0.41
SNRNP35-201ENST00000350887 PAK2Q13177 524 aa12.47□□□□□ -0.41
SNRNP35-201ENST00000350887 TRIM71Q2Q1W2 868 aaKnown RBP12.47□□□□□ -0.41
SNRNP35-201ENST00000350887 ZNF667Q5HYK9 610 aa12.47□□□□□ -0.41
SNRNP35-201ENST00000350887 FAM26DQ5JW98 314 aa12.47□□□□□ -0.41
SNRNP35-201ENST00000350887 FBXO47Q5MNV8 452 aa12.47□□□□□ -0.41
SNRNP35-201ENST00000350887 UBXN11Q5T124 520 aa12.47□□□□□ -0.41
SNRNP35-201ENST00000350887 SMYD5Q6GMV2 418 aa12.47□□□□□ -0.41
SNRNP35-201ENST00000350887 FAM71AQ8IYT1 594 aa12.47□□□□□ -0.41
SNRNP35-201ENST00000350887 USP38Q8NB14 1042 aa12.47□□□□□ -0.41
SNRNP35-201ENST00000350887 BEST2Q8NFU1 509 aa12.47□□□□□ -0.41
SNRNP35-201ENST00000350887 KIF18AQ8NI77 898 aa12.47□□□□□ -0.41
SNRNP35-201ENST00000350887 DHX38Q92620 1227 aaKnown RBP12.47□□□□□ -0.41
SNRNP35-201ENST00000350887 DEFB118Q96PH6 123 aa12.47□□□□□ -0.41
SNRNP35-201ENST00000350887 NIF3L1Q9GZT8 377 aa12.47□□□□□ -0.41
SNRNP35-201ENST00000350887 NXF3Q9H4D5 531 aaKnown RBP12.47□□□□□ -0.41
SNRNP35-201ENST00000350887 APOBEC3GQ9HC16 384 aaKnown RBP12.47□□□□□ -0.41
SNRNP35-201ENST00000350887 ERVK-5Q9HDB9 667 aa12.47□□□□□ -0.41
SNRNP35-201ENST00000350887 SEPT11Q9NVA2 429 aaKnown RBP12.47□□□□□ -0.41
SNRNP35-201ENST00000350887 ADAMTS1Q9UHI8 967 aa12.47□□□□□ -0.41
SNRNP35-201ENST00000350887 ITGA11Q9UKX5 1188 aa12.47□□□□□ -0.41
SNRNP35-201ENST00000350887 ST3GAL5Q9UNP4 418 aa12.47□□□□□ -0.41
SNRNP35-201ENST00000350887 PCDHB4Q9Y5E5 795 aa12.47□□□□□ -0.41
SNRNP35-201ENST00000350887 SQORQ9Y6N5 450 aa12.47□□□□□ -0.41
SNRNP35-201ENST00000350887 SCN1AP35498 2009 aa12.46□□□□□ -0.41
SNRNP35-201ENST00000350887 ZNF263O14978 683 aa12.46□□□□□ -0.41
SNRNP35-201ENST00000350887 TLR3O15455 904 aaKnown RBP12.46□□□□□ -0.41
SNRNP35-201ENST00000350887 CYP26A1O43174 497 aa12.46□□□□□ -0.41
SNRNP35-201ENST00000350887 CST3P01034 146 aaPredicted RBP12.46□□□□□ -0.41
SNRNP35-201ENST00000350887 ITGB3P05106 788 aa12.46□□□□□ -0.41
SNRNP35-201ENST00000350887 P4HA1P13674 534 aa12.46□□□□□ -0.41
SNRNP35-201ENST00000350887 ATICP31939 592 aa12.46□□□□□ -0.41
SNRNP35-201ENST00000350887 ARHGAP25P42331 645 aa12.46□□□□□ -0.41
SNRNP35-201ENST00000350887 RBP5P82980 135 aa12.46□□□□□ -0.41
SNRNP35-201ENST00000350887 MTFR1Q15390 333 aa12.46□□□□□ -0.41
SNRNP35-201ENST00000350887 SYT10Q6XYQ8 523 aa12.46□□□□□ -0.41
SNRNP35-201ENST00000350887 CTU1Q7Z7A3 348 aaKnown RBP12.46□□□□□ -0.41
SNRNP35-201ENST00000350887 C1orf127Q8N9H9 656 aa12.46□□□□□ -0.41
SNRNP35-201ENST00000350887 U2AF1L4Q8WU68 220 aaKnown RBP12.46□□□□□ -0.41
SNRNP35-201ENST00000350887 ELMO3Q96BJ8 720 aa12.46□□□□□ -0.41
SNRNP35-201ENST00000350887 FAXDC2Q96IV6 333 aa12.46□□□□□ -0.41
SNRNP35-201ENST00000350887 AGPAT1Q99943 283 aa12.46□□□□□ -0.41
SNRNP35-201ENST00000350887 DPP3Q9NY33 737 aa12.46□□□□□ -0.41
SNRNP35-201ENST00000350887 CNTN3Q9P232 1028 aa12.46□□□□□ -0.41
SNRNP35-201ENST00000350887 MYO1AQ9UBC5 1043 aa12.46□□□□□ -0.41
SNRNP35-201ENST00000350887 DNAI1Q9UI46 699 aa12.46□□□□□ -0.41
SNRNP35-201ENST00000350887 UBQLN1Q9UMX0 589 aaKnown RBP12.46□□□□□ -0.41
SNRNP35-201ENST00000350887 GUCA1BQ9UMX6 200 aa12.46□□□□□ -0.41
SNRNP35-201ENST00000350887 HES2Q9Y543 173 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms