RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 GPRC5CQ9NQ84 441 aa12.89□□□□□ -0.35
SMAD9-201ENST00000350148 IRF6O14896 467 aa12.89□□□□□ -0.35
SMAD9-201ENST00000350148 GPR182O15218 404 aa12.89□□□□□ -0.35
SMAD9-201ENST00000350148 CYP2C8P10632 490 aa12.89□□□□□ -0.35
SMAD9-201ENST00000350148 PSMD6Q15008 389 aa12.89□□□□□ -0.35
SMAD9-201ENST00000350148 ZNF394Q53GI3 561 aa12.89□□□□□ -0.35
SMAD9-201ENST00000350148 MAP1SQ66K74 1059 aaPredicted RBP12.89□□□□□ -0.35
SMAD9-201ENST00000350148 ACAD10Q6JQN1 1059 aa12.89□□□□□ -0.35
SMAD9-201ENST00000350148 KCNK18Q7Z418 384 aa12.89□□□□□ -0.35
SMAD9-201ENST00000350148 TSPYL2Q9H2G4 693 aaPredicted RBP12.89□□□□□ -0.35
SMAD9-201ENST00000350148 AFG3L2Q9Y4W6 797 aa12.89□□□□□ -0.35
SMAD9-201ENST00000350148 LSM8O95777 96 aaKnown RBP12.89□□□□□ -0.35
SMAD9-201ENST00000350148 KLRC1P26715 233 aa12.89□□□□□ -0.35
SMAD9-201ENST00000350148 ICAM3P32942 547 aa12.89□□□□□ -0.35
SMAD9-201ENST00000350148 PLTPP55058 493 aa12.89□□□□□ -0.35
SMAD9-201ENST00000350148 MARSP56192 900 aaKnown RBP12.89□□□□□ -0.35
SMAD9-201ENST00000350148 ADCY2Q08462 1091 aa12.89□□□□□ -0.35
SMAD9-201ENST00000350148 NFRKBQ6P4R8 1299 aa12.89□□□□□ -0.35
SMAD9-201ENST00000350148 LBX2Q6XYB7 198 aa12.89□□□□□ -0.35
SMAD9-201ENST00000350148 ARHGEF18Q6ZSZ5 1173 aa12.89□□□□□ -0.35
SMAD9-201ENST00000350148 CENPUQ71F23 418 aa12.89□□□□□ -0.35
SMAD9-201ENST00000350148 GBP5Q96PP8 586 aa12.89□□□□□ -0.35
SMAD9-201ENST00000350148 MED15Q96RN5 788 aa12.89□□□□□ -0.35
SMAD9-201ENST00000350148 NOC2LQ9Y3T9 749 aaKnown RBP12.89□□□□□ -0.35
SMAD9-201ENST00000350148 ZMYM2Q9UBW7 1377 aa12.89□□□□□ -0.35
SMAD9-201ENST00000350148 GLI3P10071 1580 aa12.89□□□□□ -0.35
SMAD9-201ENST00000350148 H3BRB1 525 aa12.88□□□□□ -0.35
SMAD9-201ENST00000350148 NLRP11P59045 1033 aaKnown RBP12.88□□□□□ -0.35
SMAD9-201ENST00000350148 CBWD1Q9BRT8 395 aa12.88□□□□□ -0.35
SMAD9-201ENST00000350148 FOXP3Q9BZS1 431 aa12.88□□□□□ -0.35
SMAD9-201ENST00000350148 ASB7Q9H672 318 aa12.88□□□□□ -0.35
SMAD9-201ENST00000350148 TUT1Q9H6E5 874 aaKnown RBP12.88□□□□□ -0.35
SMAD9-201ENST00000350148 SMIM24O75264 130 aa12.88□□□□□ -0.35
SMAD9-201ENST00000350148 ZBED1O96006 694 aa12.88□□□□□ -0.35
SMAD9-201ENST00000350148 UBA1P22314 1058 aaKnown RBP12.88□□□□□ -0.35
SMAD9-201ENST00000350148 PMS1P54277 932 aaKnown RBP12.88□□□□□ -0.35
SMAD9-201ENST00000350148 DHX9Q08211 1270 aaKnown RBP12.88□□□□□ -0.35
SMAD9-201ENST00000350148 CASP8Q14790 479 aa12.88□□□□□ -0.35
SMAD9-201ENST00000350148 MEA1Q16626 185 aa12.88□□□□□ -0.35
SMAD9-201ENST00000350148 SH3D19Q5HYK7 790 aa12.88□□□□□ -0.35
SMAD9-201ENST00000350148 GNASQ5JWF2 1037 aa12.88□□□□□ -0.35
SMAD9-201ENST00000350148 SPATA4Q8NEY3 305 aa12.88□□□□□ -0.35
SMAD9-201ENST00000350148 NAGPAQ9UK23 515 aa12.88□□□□□ -0.35
SMAD9-201ENST00000350148 HMGB1P1B2RPK0 211 aaPredicted RBP12.88□□□□□ -0.35
SMAD9-201ENST00000350148 I3L4J1 428 aa12.88□□□□□ -0.35
SMAD9-201ENST00000350148 ACKR2O00590 384 aa12.88□□□□□ -0.35
SMAD9-201ENST00000350148 USP2O75604 605 aaPredicted RBP12.88□□□□□ -0.35
SMAD9-201ENST00000350148 GCNT1Q02742 428 aa12.88□□□□□ -0.35
SMAD9-201ENST00000350148 ENPEPQ07075 957 aa12.88□□□□□ -0.35
SMAD9-201ENST00000350148 MAP7D1Q3KQU3 841 aa12.88□□□□□ -0.35
SMAD9-201ENST00000350148 C6orf118Q5T5N4 469 aa12.88□□□□□ -0.35
SMAD9-201ENST00000350148 TAF2Q6P1X5 1199 aa12.88□□□□□ -0.35
SMAD9-201ENST00000350148 CBWD2Q8IUF1 395 aa12.88□□□□□ -0.35
SMAD9-201ENST00000350148 PASD1Q8IV76 773 aa12.88□□□□□ -0.35
SMAD9-201ENST00000350148 CCDC13Q8IYE1 715 aa12.88□□□□□ -0.35
SMAD9-201ENST00000350148 ABCB6Q9NP58 842 aa12.88□□□□□ -0.35
SMAD9-201ENST00000350148 PTPN22Q9Y2R2 807 aa12.88□□□□□ -0.35
SMAD9-201ENST00000350148 SMAPO00193 183 aa12.88□□□□□ -0.35
SMAD9-201ENST00000350148 SPATA31C1P0DKV0 1188 aa12.88□□□□□ -0.35
SMAD9-201ENST00000350148 PCSK1P29120 753 aa12.88□□□□□ -0.35
SMAD9-201ENST00000350148 NPY5RQ15761 445 aa12.88□□□□□ -0.35
SMAD9-201ENST00000350148 KSR1Q8IVT5 923 aa12.88□□□□□ -0.35
SMAD9-201ENST00000350148 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.88□□□□□ -0.35
SMAD9-201ENST00000350148 WNK4Q96J92 1243 aa12.88□□□□□ -0.35
SMAD9-201ENST00000350148 TSPAN18Q96SJ8 248 aa12.88□□□□□ -0.35
SMAD9-201ENST00000350148 SYT17Q9BSW7 474 aa12.88□□□□□ -0.35
SMAD9-201ENST00000350148 AP1M1Q9BXS5 423 aa12.88□□□□□ -0.35
SMAD9-201ENST00000350148 FRMD8P1Q9BZ68 369 aaPredicted RBP12.88□□□□□ -0.35
SMAD9-201ENST00000350148 L2HGDHQ9H9P8 463 aa12.88□□□□□ -0.35
SMAD9-201ENST00000350148 NGRNQ9NPE2 291 aaKnown RBP12.88□□□□□ -0.35
SMAD9-201ENST00000350148 ZBTB48P10074 688 aaPredicted RBP12.87□□□□□ -0.35
SMAD9-201ENST00000350148 KRT3P12035 628 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 AKR1A1P14550 325 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 CASP4P49662 377 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 KLK7P49862 253 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 MTG1Q9BT17 334 aaPredicted RBP12.87□□□□□ -0.35
SMAD9-201ENST00000350148 COL1A2P08123 1366 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 IFRD2Q12894 506 aaPredicted RBP12.87□□□□□ -0.35
SMAD9-201ENST00000350148 CDKL3Q8IVW4 592 aaPredicted RBP12.87□□□□□ -0.35
SMAD9-201ENST00000350148 TRIM42Q8IWZ5 723 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 PDIK1LQ8N165 341 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 AFG1LQ8WV93 481 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 KLC2Q9H0B6 622 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 TOGARAM1Q9Y4F4 1720 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 RNF40O75150 1001 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 ZMYND10O75800 440 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 VPS41P49754 854 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 NR1H3Q13133 447 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 CFAP157Q5JU67 520 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 CHADLQ6NUI6 762 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 MMGT1Q8N4V1 131 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 SLC35C1Q96A29 364 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 RNPC3Q96LT9 517 aaKnown RBP12.87□□□□□ -0.35
SMAD9-201ENST00000350148 GLT1D1Q96MS3 346 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 TAF1DQ9H5J8 278 aaPredicted RBP12.87□□□□□ -0.35
SMAD9-201ENST00000350148 EHD2Q9NZN4 543 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 GOLGA8CPA6NN73 597 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 F8VZ95 297 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 ITGB5P18084 799 aa12.87□□□□□ -0.35
SMAD9-201ENST00000350148 ELF1P32519 619 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms