RNA–Protein interactions for RNA: ENST00000348547.6

ERGIC3-202, Transcript of ERGIC and golgi 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ERGIC3, Length 1,359 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-202ENST00000348547 CCDC40Q4G0X9 1142 aa13.78□□□□□ -0.2
ERGIC3-202ENST00000348547 DCAF17Q5H9S7 520 aaPredicted RBP13.78□□□□□ -0.2
ERGIC3-202ENST00000348547 SV2AQ7L0J3 742 aa13.78□□□□□ -0.2
ERGIC3-202ENST00000348547 WDR49Q8IV35 697 aa13.78□□□□□ -0.2
ERGIC3-202ENST00000348547 LMO3Q8TAP4 145 aa13.78□□□□□ -0.2
ERGIC3-202ENST00000348547 TAS1R2Q8TE23 839 aa13.78□□□□□ -0.2
ERGIC3-202ENST00000348547 NAP1L5Q96NT1 182 aaPredicted RBP13.78□□□□□ -0.2
ERGIC3-202ENST00000348547 XYLT2Q9H1B5 865 aa13.78□□□□□ -0.2
ERGIC3-202ENST00000348547 MARCH5Q9NX47 278 aa13.78□□□□□ -0.2
ERGIC3-202ENST00000348547 LRFN2Q9ULH4 789 aa13.78□□□□□ -0.2
ERGIC3-202ENST00000348547 COLQQ9Y215 455 aaPredicted RBP13.78□□□□□ -0.2
ERGIC3-202ENST00000348547 CASTOR2A6NHX0 329 aa13.77□□□□□ -0.21
ERGIC3-202ENST00000348547 CAVIN2O95810 425 aa13.77□□□□□ -0.21
ERGIC3-202ENST00000348547 EFEMP2O95967 443 aa13.77□□□□□ -0.21
ERGIC3-202ENST00000348547 CST3P01034 146 aaPredicted RBP13.77□□□□□ -0.21
ERGIC3-202ENST00000348547 EEF1GP26641 437 aaKnown RBP13.77□□□□□ -0.21
ERGIC3-202ENST00000348547 COPB1P53618 953 aaKnown RBP13.77□□□□□ -0.21
ERGIC3-202ENST00000348547 YARSP54577 528 aaKnown RBP13.77□□□□□ -0.21
ERGIC3-202ENST00000348547 ENPEPQ07075 957 aa13.77□□□□□ -0.21
ERGIC3-202ENST00000348547 GRIK3Q13003 919 aa13.77□□□□□ -0.21
ERGIC3-202ENST00000348547 TRAPPC11Q7Z392 1133 aa13.77□□□□□ -0.21
ERGIC3-202ENST00000348547 CMTR2Q8IYT2 770 aaKnown RBP13.77□□□□□ -0.21
ERGIC3-202ENST00000348547 TDHQ8IZJ6 230 aa13.77□□□□□ -0.21
ERGIC3-202ENST00000348547 PHOSPHO2Q8TCD6 241 aa13.77□□□□□ -0.21
ERGIC3-202ENST00000348547 TUBGCP2Q9BSJ2 902 aa13.77□□□□□ -0.21
ERGIC3-202ENST00000348547 MMRN2Q9H8L6 949 aa13.77□□□□□ -0.21
ERGIC3-202ENST00000348547 UBN1Q9NPG3 1134 aa13.77□□□□□ -0.21
ERGIC3-202ENST00000348547 DPP3Q9NY33 737 aa13.77□□□□□ -0.21
ERGIC3-202ENST00000348547 DERAQ9Y315 318 aa13.77□□□□□ -0.21
ERGIC3-202ENST00000348547 MYO9BQ13459 2157 aa13.76□□□□□ -0.21
ERGIC3-202ENST00000348547 COL6A3P12111 3177 aa13.76□□□□□ -0.21
ERGIC3-202ENST00000348547 FSD2A1L4K1 749 aa13.76□□□□□ -0.21
ERGIC3-202ENST00000348547 LINC01553A4QN01 128 aa13.76□□□□□ -0.21
ERGIC3-202ENST00000348547 LRRC10BA6NIK2 292 aa13.76□□□□□ -0.21
ERGIC3-202ENST00000348547 TEX33O43247 280 aa13.76□□□□□ -0.21
ERGIC3-202ENST00000348547 KIF4AO95239 1232 aa13.76□□□□□ -0.21
ERGIC3-202ENST00000348547 GNA14O95837 355 aa13.76□□□□□ -0.21
ERGIC3-202ENST00000348547 THP07101 528 aa13.76□□□□□ -0.21
ERGIC3-202ENST00000348547 LRPAP1P30533 357 aa13.76□□□□□ -0.21
ERGIC3-202ENST00000348547 FMO5P49326 533 aa13.76□□□□□ -0.21
ERGIC3-202ENST00000348547 CLCNKBP51801 687 aa13.76□□□□□ -0.21
ERGIC3-202ENST00000348547 KCNH2Q12809 1159 aa13.76□□□□□ -0.21
ERGIC3-202ENST00000348547 TUSC3Q13454 348 aa13.76□□□□□ -0.21
ERGIC3-202ENST00000348547 MAN2A1Q16706 1144 aa13.76□□□□□ -0.21
ERGIC3-202ENST00000348547 UPP1Q16831 310 aa13.76□□□□□ -0.21
ERGIC3-202ENST00000348547 TPD52L1Q16890 204 aaPredicted RBP13.76□□□□□ -0.21
ERGIC3-202ENST00000348547 EPC2Q52LR7 807 aa13.76□□□□□ -0.21
ERGIC3-202ENST00000348547 C9orf57Q5W0N0 161 aa13.76□□□□□ -0.21
ERGIC3-202ENST00000348547 HACE1Q8IYU2 909 aa13.76□□□□□ -0.21
ERGIC3-202ENST00000348547 RAD9AQ99638 391 aa13.76□□□□□ -0.21
ERGIC3-202ENST00000348547 PBX4Q9BYU1 374 aa13.76□□□□□ -0.21
ERGIC3-202ENST00000348547 VPS16Q9H269 839 aa13.76□□□□□ -0.21
ERGIC3-202ENST00000348547 APOBEC3GQ9HC16 384 aaKnown RBP13.76□□□□□ -0.21
ERGIC3-202ENST00000348547 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.76□□□□□ -0.216e-11■■■■■ 175.8
ERGIC3-202ENST00000348547 AJAP1Q9UKB5 411 aaPredicted RBP13.76□□□□□ -0.21
ERGIC3-202ENST00000348547 LGALS16A8MUM7 142 aa13.75□□□□□ -0.21
ERGIC3-202ENST00000348547 NT5C1B-RDH14C9J2C7 533 aa13.75□□□□□ -0.21
ERGIC3-202ENST00000348547 I3L4J1 428 aa13.75□□□□□ -0.21
ERGIC3-202ENST00000348547 PIRO00625 290 aa13.75□□□□□ -0.21
ERGIC3-202ENST00000348547 TLL1O43897 1013 aa13.75□□□□□ -0.21
ERGIC3-202ENST00000348547 HLA-DRAP01903 254 aa13.75□□□□□ -0.21
ERGIC3-202ENST00000348547 ITGB3P05106 788 aa13.75□□□□□ -0.21
ERGIC3-202ENST00000348547 CA3P07451 260 aa13.75□□□□□ -0.21
ERGIC3-202ENST00000348547 TNNI1P19237 187 aa13.75□□□□□ -0.21
ERGIC3-202ENST00000348547 POLR2BP30876 1174 aaKnown RBP13.75□□□□□ -0.21
ERGIC3-202ENST00000348547 MTIF2P46199 727 aaKnown RBP13.75□□□□□ -0.21
ERGIC3-202ENST00000348547 KLK7P49862 253 aa13.75□□□□□ -0.21
ERGIC3-202ENST00000348547 MYL6P60660 151 aa13.75□□□□□ -0.21
ERGIC3-202ENST00000348547 BTG3Q14201 252 aaPredicted RBP13.75□□□□□ -0.21
ERGIC3-202ENST00000348547 VWA3BQ502W6 1294 aa13.75□□□□□ -0.21
ERGIC3-202ENST00000348547 TCERG1LQ5VWI1 586 aa13.75□□□□□ -0.21
ERGIC3-202ENST00000348547 SPOPLQ6IQ16 392 aa13.75□□□□□ -0.21
ERGIC3-202ENST00000348547 CD302Q8IX05 232 aa13.75□□□□□ -0.21
ERGIC3-202ENST00000348547 LRRC43Q8N309 656 aa13.75□□□□□ -0.21
ERGIC3-202ENST00000348547 CLP1Q92989 425 aaKnown RBP13.75□□□□□ -0.21
ERGIC3-202ENST00000348547 RPS6KC1Q96S38 1066 aa13.75□□□□□ -0.21
ERGIC3-202ENST00000348547 YME1L1Q96TA2 773 aa13.75□□□□□ -0.21
ERGIC3-202ENST00000348547 PI4K2AQ9BTU6 479 aa13.75□□□□□ -0.21
ERGIC3-202ENST00000348547 METTL14Q9HCE5 456 aaKnown RBP13.75□□□□□ -0.21
ERGIC3-202ENST00000348547 SIX2Q9NPC8 291 aa13.75□□□□□ -0.21
ERGIC3-202ENST00000348547 COQ4Q9Y3A0 265 aa13.75□□□□□ -0.21
ERGIC3-202ENST00000348547 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.75□□□□□ -0.21
ERGIC3-202ENST00000348547 A0A1B0GTH6 734 aa13.74□□□□□ -0.21
ERGIC3-202ENST00000348547 SMTNL1A8MU46 457 aa13.74□□□□□ -0.21
ERGIC3-202ENST00000348547 BECN2A8MW95 431 aa13.74□□□□□ -0.21
ERGIC3-202ENST00000348547 TULP1O00294 542 aaPredicted RBP13.74□□□□□ -0.21
ERGIC3-202ENST00000348547 SOX1O00570 391 aaPredicted RBP13.74□□□□□ -0.21
ERGIC3-202ENST00000348547 EPHB6O15197 1021 aa13.74□□□□□ -0.21
ERGIC3-202ENST00000348547 HOXA2O43364 376 aa13.74□□□□□ -0.21
ERGIC3-202ENST00000348547 ZC3H11AO75152 810 aaKnown RBP eCLIP13.74□□□□□ -0.21
ERGIC3-202ENST00000348547 FGFR1OPO95684 399 aaKnown RBP13.74□□□□□ -0.21
ERGIC3-202ENST00000348547 AFPP02771 609 aaKnown RBP13.74□□□□□ -0.21
ERGIC3-202ENST00000348547 GALTP07902 379 aa13.74□□□□□ -0.21
ERGIC3-202ENST00000348547 KRT13P13646 458 aa13.74□□□□□ -0.21
ERGIC3-202ENST00000348547 MXI1P50539 228 aa13.74□□□□□ -0.21
ERGIC3-202ENST00000348547 BCAR1P56945 870 aa13.74□□□□□ -0.21
ERGIC3-202ENST00000348547 FANCCQ00597 558 aa13.74□□□□□ -0.21
ERGIC3-202ENST00000348547 TAP1Q03518 808 aa13.74□□□□□ -0.21
ERGIC3-202ENST00000348547 KCNMA1Q12791 1236 aa13.74□□□□□ -0.21
ERGIC3-202ENST00000348547 DUOXA2Q1HG44 320 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms