RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 CCDC174Q6PII3 467 aa18.92■□□□□ 0.62
VHL-202ENST00000345392 HHIPL2Q6UWX4 724 aa18.92■□□□□ 0.62
VHL-202ENST00000345392 CAPN12Q6ZSI9 719 aa18.92■□□□□ 0.62
VHL-202ENST00000345392 ANKRD35Q8N283 1001 aa18.92■□□□□ 0.62
VHL-202ENST00000345392 SUPT20HQ8NEM7 779 aa18.92■□□□□ 0.62
VHL-202ENST00000345392 DHX38Q92620 1227 aaKnown RBP18.92■□□□□ 0.62
VHL-202ENST00000345392 SEMA4DQ92854 862 aa18.92■□□□□ 0.62
VHL-202ENST00000345392 SLC7A6OSQ96CW6 309 aaPredicted RBP18.92■□□□□ 0.62
VHL-202ENST00000345392 NACC1Q96RE7 527 aa18.92■□□□□ 0.62
VHL-202ENST00000345392 CAMKK2Q96RR4 588 aa18.92■□□□□ 0.62
VHL-202ENST00000345392 PLVAPQ9BX97 442 aa18.92■□□□□ 0.62
VHL-202ENST00000345392 NYAP2Q9P242 653 aa18.92■□□□□ 0.62
VHL-202ENST00000345392 LTBP1Q14766 1721 aa18.92■□□□□ 0.62
VHL-202ENST00000345392 UBE4BO95155 1302 aa18.92■□□□□ 0.62
VHL-202ENST00000345392 CTCFP49711 727 aaPredicted RBP18.92■□□□□ 0.62
VHL-202ENST00000345392 MXI1P50539 228 aa18.92■□□□□ 0.62
VHL-202ENST00000345392 TUBP50607 506 aa18.92■□□□□ 0.62
VHL-202ENST00000345392 ABCB5Q2M3G0 1257 aa18.92■□□□□ 0.62
VHL-202ENST00000345392 C11orf91Q3C1V1 193 aa18.92■□□□□ 0.62
VHL-202ENST00000345392 MKL1Q969V6 931 aa18.92■□□□□ 0.62
VHL-202ENST00000345392 TDRD3Q9H7E2 651 aaKnown RBP18.92■□□□□ 0.62
VHL-202ENST00000345392 UVRAGQ9P2Y5 699 aa18.92■□□□□ 0.62
VHL-202ENST00000345392 GREB1LQ9C091 1923 aaPredicted RBP18.92■□□□□ 0.62
VHL-202ENST00000345392 UBR3Q6ZT12 1888 aa18.92■□□□□ 0.62
VHL-202ENST00000345392 SIPA1L1O43166 1804 aa18.91■□□□□ 0.62
VHL-202ENST00000345392 DDX39AO00148 427 aaKnown RBP18.91■□□□□ 0.62
VHL-202ENST00000345392 ASMTLO95671 621 aa18.91■□□□□ 0.62
VHL-202ENST00000345392 PRELPP51888 382 aa18.91■□□□□ 0.62
VHL-202ENST00000345392 YARSP54577 528 aaKnown RBP18.91■□□□□ 0.62
VHL-202ENST00000345392 ZYXQ15942 572 aaKnown RBP18.91■□□□□ 0.62
VHL-202ENST00000345392 C4orf33Q8N1A6 199 aa18.91■□□□□ 0.62
VHL-202ENST00000345392 ATL2Q8NHH9 583 aa18.91■□□□□ 0.62
VHL-202ENST00000345392 MAML1Q92585 1016 aa18.91■□□□□ 0.62
VHL-202ENST00000345392 LBHD1Q9BQE6 289 aaPredicted RBP18.91■□□□□ 0.62
VHL-202ENST00000345392 CCDC77Q9BR77 488 aa18.91■□□□□ 0.62
VHL-202ENST00000345392 STRA6Q9BX79 667 aa18.91■□□□□ 0.62
VHL-202ENST00000345392 PDGFDQ9GZP0 370 aaPredicted RBP18.91■□□□□ 0.62
VHL-202ENST00000345392 PI4KBQ9UBF8 816 aa18.91■□□□□ 0.62
VHL-202ENST00000345392 STARD13Q9Y3M8 1113 aa18.91■□□□□ 0.62
VHL-202ENST00000345392 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.91■□□□□ 0.62
VHL-202ENST00000345392 USH1CQ9Y6N9 552 aa18.91■□□□□ 0.62
VHL-202ENST00000345392 ARHGEF35A5YM69 484 aa18.91■□□□□ 0.62
VHL-202ENST00000345392 POC1B-GALNT4F8VUJ3 575 aa18.91■□□□□ 0.62
VHL-202ENST00000345392 MAPK13O15264 365 aa18.91■□□□□ 0.62
VHL-202ENST00000345392 BMP3P12645 472 aa18.91■□□□□ 0.62
VHL-202ENST00000345392 SARNPP82979 210 aaKnown RBP18.91■□□□□ 0.62
VHL-202ENST00000345392 MOGSQ13724 837 aa18.91■□□□□ 0.62
VHL-202ENST00000345392 IZUMO3Q5VZ72 239 aa18.91■□□□□ 0.62
VHL-202ENST00000345392 CCDC127Q96BQ5 260 aa18.91■□□□□ 0.62
VHL-202ENST00000345392 LXNQ9BS40 222 aa18.91■□□□□ 0.62
VHL-202ENST00000345392 UNC45AQ9H3U1 944 aa18.91■□□□□ 0.62
VHL-202ENST00000345392 CYP3A4P08684 503 aa18.9■□□□□ 0.62
VHL-202ENST00000345392 CALRP27797 417 aaKnown RBP18.9■□□□□ 0.62
VHL-202ENST00000345392 ILDR2Q71H61 639 aa18.9■□□□□ 0.62
VHL-202ENST00000345392 AGGF1Q8N302 714 aaeCLIP18.9■□□□□ 0.62
VHL-202ENST00000345392 RBM15Q96T37 977 aaKnown RBP eCLIP18.9■□□□□ 0.62
VHL-202ENST00000345392 EURLQ9NYK6 297 aa18.9■□□□□ 0.62
VHL-202ENST00000345392 HSPBP1Q9NZL4 362 aa18.9■□□□□ 0.62
VHL-202ENST00000345392 SUGT1Q9Y2Z0 365 aa18.9■□□□□ 0.62
VHL-202ENST00000345392 EXOC1LA0A1B0GW35 172 aa18.9■□□□□ 0.62
VHL-202ENST00000345392 SPDYE5A6NIY4 337 aa18.9■□□□□ 0.62
VHL-202ENST00000345392 MAP3K13O43283 966 aa18.9■□□□□ 0.62
VHL-202ENST00000345392 SORBS3O60504 671 aa18.9■□□□□ 0.62
VHL-202ENST00000345392 RALAP11233 206 aa18.9■□□□□ 0.62
VHL-202ENST00000345392 BAG6P46379 1132 aa18.9■□□□□ 0.62
VHL-202ENST00000345392 PTDSS1P48651 473 aaKnown RBP18.9■□□□□ 0.62
VHL-202ENST00000345392 INHBEP58166 350 aa18.9■□□□□ 0.62
VHL-202ENST00000345392 PPP2R5CQ13362 524 aa18.9■□□□□ 0.62
VHL-202ENST00000345392 STAT4Q14765 748 aa18.9■□□□□ 0.62
VHL-202ENST00000345392 ZNF365Q70YC5 407 aa18.9■□□□□ 0.62
VHL-202ENST00000345392 GRK7Q8WTQ7 553 aa18.9■□□□□ 0.62
VHL-202ENST00000345392 ARP10275 920 aa18.89■□□□□ 0.62
VHL-202ENST00000345392 RPA3P35244 121 aaPredicted RBP18.89■□□□□ 0.62
VHL-202ENST00000345392 CDR2Q01850 454 aa18.89■□□□□ 0.62
VHL-202ENST00000345392 BIRC2Q13490 618 aa18.89■□□□□ 0.62
VHL-202ENST00000345392 GNPTABQ3T906 1256 aa18.89■□□□□ 0.62
VHL-202ENST00000345392 DENND2DQ9H6A0 471 aaPredicted RBP18.89■□□□□ 0.62
VHL-202ENST00000345392 PRR12Q9ULL5 1215 aa18.89■□□□□ 0.62
VHL-202ENST00000345392 ATP5HO75947 161 aa18.89■□□□□ 0.61
VHL-202ENST00000345392 GCAP28676 217 aa18.89■□□□□ 0.61
VHL-202ENST00000345392 GJC1P36383 396 aa18.89■□□□□ 0.61
VHL-202ENST00000345392 MAGEA4P43358 317 aa18.89■□□□□ 0.61
VHL-202ENST00000345392 SESN3P58005 492 aa18.89■□□□□ 0.61
VHL-202ENST00000345392 CAV1Q03135 178 aa18.89■□□□□ 0.61
VHL-202ENST00000345392 PKN2Q16513 984 aaKnown RBP18.89■□□□□ 0.61
VHL-202ENST00000345392 TRABD2AQ86V40 505 aa18.89■□□□□ 0.61
VHL-202ENST00000345392 XXYLT1Q8NBI6 393 aa18.89■□□□□ 0.61
VHL-202ENST00000345392 SHC3Q92529 594 aa18.89■□□□□ 0.61
VHL-202ENST00000345392 ZDHHC15Q96MV8 337 aa18.89■□□□□ 0.61
VHL-202ENST00000345392 ADRB2P07550 413 aa18.88■□□□□ 0.61
VHL-202ENST00000345392 KRT15P19012 456 aa18.88■□□□□ 0.61
VHL-202ENST00000345392 MFAP3P55082 362 aa18.88■□□□□ 0.61
VHL-202ENST00000345392 TAF1BQ53T94 588 aaPredicted RBP18.88■□□□□ 0.61
VHL-202ENST00000345392 ACAD10Q6JQN1 1059 aa18.88■□□□□ 0.61
VHL-202ENST00000345392 PADI6Q6TGC4 694 aa18.88■□□□□ 0.61
VHL-202ENST00000345392 TEX9Q8N6V9 391 aa18.88■□□□□ 0.61
VHL-202ENST00000345392 KIAA1586Q9HCI6 787 aa18.88■□□□□ 0.61
VHL-202ENST00000345392 ACTL7BQ9Y614 415 aa18.88■□□□□ 0.61
VHL-202ENST00000345392 KLRG2A4D1S0 409 aaPredicted RBP18.88■□□□□ 0.61
VHL-202ENST00000345392 GRIN3BO60391 1043 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms