RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 ULK2Q8IYT8 1036 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 XKR8Q9H6D3 395 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 CNNM2Q9H8M5 875 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 PCDHA12Q9UN75 941 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 CAPN6Q9Y6Q1 641 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 NLRP1Q9C000 1473 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 NINQ8N4C6 2090 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 PALMO75781 387 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 DCDC1P59894 354 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 CDK18Q07002 472 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 FOXR1Q6PIV2 292 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 EXD2Q9NVH0 621 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 MAP10Q9P2G4 905 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 HPCAL4Q9UM19 191 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 DMTF1Q9Y222 760 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 USP15Q9Y4E8 981 aaPredicted RBP3.95□□□□□ -1.78
SYNE2-202ENST00000344113 LRRC10BA6NIK2 292 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 TRIM3O75382 744 aaPredicted RBP3.95□□□□□ -1.78
SYNE2-202ENST00000344113 MAFO75444 373 aaPredicted RBP3.95□□□□□ -1.78
SYNE2-202ENST00000344113 TJP3O95049 919 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 ACADSBP45954 432 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 LRMPQ12912 555 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 TYW1BQ6NUM6 668 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 ZNF280BQ86YH2 543 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 APPBP2Q92624 585 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 MRPL48Q96GC5 212 aaKnown RBP3.95□□□□□ -1.78
SYNE2-202ENST00000344113 FICDQ9BVA6 458 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 PDZK1P1A8MUH7 402 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 HSPA2P54652 639 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 SPANXN2Q5MJ10 180 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 FAM45BPQ6NSW5 357 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 C11orf88Q6PI97 169 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 ADGRF2Q8IZF7 708 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 TTLL11Q8NHH1 800 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 KRT12Q99456 494 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 DLGAP2Q9P1A6 1054 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 CHPF2Q9P2E5 772 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 NEDD4P46934 1319 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 FAM47E-STBD1D6RA91 191 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 TK2O00142 265 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 ERP29P30040 261 aaKnown RBP3.95□□□□□ -1.78
SYNE2-202ENST00000344113 GNPTGQ9UJJ9 305 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 DAPK1P53355 1430 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 ATP7BP35670 1465 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 HOXA2O43364 376 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 SLC26A4O43511 780 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 ZNF806P0C7X5 589 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 SLC15A2Q16348 729 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 GRAMD2AQ8IUY3 354 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 ESX1Q8N693 406 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 TCEAL3Q969E4 200 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 SLX1AQ9BQ83 275 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 LPIN3Q9BQK8 851 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 CEP44Q9C0F1 390 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 DNAJC11Q9NVH1 559 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 A0A1W2PRQ8 180 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 FAM86C2PA6NEL3 165 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 TMCC2O75069 709 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 ITGB6P18564 788 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 POU1F1P28069 291 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 ARL1P40616 181 aaPredicted RBP3.95□□□□□ -1.78
SYNE2-202ENST00000344113 NIPAL4Q0D2K0 466 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 LIN52Q52LA3 116 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 FAM109BQ6ICB4 259 aaPredicted RBP3.95□□□□□ -1.78
SYNE2-202ENST00000344113 TRIM47Q96LD4 638 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 VPS4AQ9UN37 437 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 MAGEA6P43360 314 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 C21orf59P57076 290 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 LGALS3BPQ08380 585 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 INPP5AQ14642 412 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 TTC22Q5TAA0 569 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 SLC30A10Q6XR72 485 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 ASLP04424 464 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 NQO1P15559 274 aaKnown RBP3.95□□□□□ -1.78
SYNE2-202ENST00000344113 RAB4AP20338 218 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 NLRP11P59045 1033 aaKnown RBP3.95□□□□□ -1.78
SYNE2-202ENST00000344113 SYDE1Q6ZW31 735 aaPredicted RBP3.95□□□□□ -1.78
SYNE2-202ENST00000344113 ARHGEF19Q8IW93 802 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 ANKK1Q8NFD2 765 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 ANKFY1Q9P2R3 1169 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 MYO18AQ92614 2054 aaKnown RBP3.95□□□□□ -1.78
SYNE2-202ENST00000344113 NPR2P20594 1047 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 COBLL1Q53SF7 1204 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 JADE1Q6IE81 842 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 VSTM4Q8IW00 320 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 TBC1D15Q8TC07 691 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 ANKRD49Q8WVL7 239 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 C2orf49Q9BVC5 232 aaPredicted RBP3.95□□□□□ -1.78
SYNE2-202ENST00000344113 IP6K2Q9UHH9 426 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 CDV3Q9UKY7 258 aaKnown RBP3.95□□□□□ -1.78
SYNE2-202ENST00000344113 PNMA3Q9UL41 463 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 C2CD2Q9Y426 696 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 MROH5Q6ZUA9 1318 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 DIDO1Q9BTC0 2240 aaKnown RBP3.95□□□□□ -1.78
SYNE2-202ENST00000344113 PRDM15P57071 1507 aaPredicted RBP3.94□□□□□ -1.78
SYNE2-202ENST00000344113 E9PBE3 544 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 CNOT3O75175 753 aaKnown RBP3.94□□□□□ -1.78
SYNE2-202ENST00000344113 POLR2FP61218 127 aaKnown RBP3.94□□□□□ -1.78
SYNE2-202ENST00000344113 PPP2R2AP63151 447 aa3.94□□□□□ -1.78
SYNE2-202ENST00000344113 ADCK5Q3MIX3 580 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms