RNA–Protein interactions for RNA: ENST00000343106.9

UBE2D3-203, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS P4 TSL 2 BASIC

Gene UBE2D3, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-203ENST00000343106 E2F5Q15329 346 aa10.54□□□□□ -0.72
UBE2D3-203ENST00000343106 BRDTQ58F21 947 aaPredicted RBP10.54□□□□□ -0.72
UBE2D3-203ENST00000343106 ZBTB41Q5SVQ8 909 aa10.54□□□□□ -0.72
UBE2D3-203ENST00000343106 CYP4F22Q6NT55 531 aa10.54□□□□□ -0.72
UBE2D3-203ENST00000343106 HIBCHQ6NVY1 386 aaPredicted RBP10.54□□□□□ -0.72
UBE2D3-203ENST00000343106 CAPN12Q6ZSI9 719 aa10.54□□□□□ -0.72
UBE2D3-203ENST00000343106 TRMT10CQ7L0Y3 403 aaKnown RBP10.54□□□□□ -0.72
UBE2D3-203ENST00000343106 ANKS1BQ7Z6G8 1248 aa10.54□□□□□ -0.72
UBE2D3-203ENST00000343106 PIGWQ7Z7B1 504 aa10.54□□□□□ -0.72
UBE2D3-203ENST00000343106 USP37Q86T82 979 aa10.54□□□□□ -0.72
UBE2D3-203ENST00000343106 TBC1D1Q86TI0 1168 aaPredicted RBP10.54□□□□□ -0.72
UBE2D3-203ENST00000343106 CCDC60Q8IWA6 550 aaPredicted RBP10.54□□□□□ -0.72
UBE2D3-203ENST00000343106 TMC2Q8TDI7 906 aa10.54□□□□□ -0.72
UBE2D3-203ENST00000343106 TMEM174Q8WUU8 243 aa10.54□□□□□ -0.72
UBE2D3-203ENST00000343106 TCP11Q8WWU5 503 aa10.54□□□□□ -0.72
UBE2D3-203ENST00000343106 DCLK3Q9C098 648 aa10.54□□□□□ -0.72
UBE2D3-203ENST00000343106 STMN4Q9H169 189 aaPredicted RBP10.54□□□□□ -0.72
UBE2D3-203ENST00000343106 KDM4CQ9H3R0 1056 aa10.54□□□□□ -0.72
UBE2D3-203ENST00000343106 MYOZ2Q9NPC6 264 aa10.54□□□□□ -0.72
UBE2D3-203ENST00000343106 PGAP2Q9UHJ9 254 aa10.54□□□□□ -0.72
UBE2D3-203ENST00000343106 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.54□□□□□ -0.72
UBE2D3-203ENST00000343106 PTPRJQ12913 1337 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 VWA5AO00534 786 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 ASAP2O43150 1006 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 CLTAP09496 248 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 CETPP11597 493 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 KRT10P13645 584 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 IVDP26440 423 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 DSG3P32926 999 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 RDXP35241 583 aaKnown RBP10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 MPP2Q14168 576 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 PLCB4Q15147 1175 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 TDRD10Q5VZ19 366 aaKnown RBP10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 NUGGCQ68CJ6 796 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 ZNF365Q70YC5 407 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 FAM83AQ86UY5 434 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 PNMA8AQ86V59 439 aaPredicted RBP10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 NIM1KQ8IY84 436 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 ATL2Q8NHH9 583 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 ZKSCAN4Q969J2 545 aaPredicted RBP10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 ACSF2Q96CM8 615 aaPredicted RBP10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 TBC1D31Q96DN5 1066 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 THOC1Q96FV9 657 aaKnown RBP10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 DDX27Q96GQ7 796 aaKnown RBP10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 IFT74Q96LB3 600 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 TIPINQ9BVW5 301 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 XPNPEP1Q9NQW7 623 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 HOMER3Q9NSC5 361 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 ADAM22Q9P0K1 906 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 WHRNQ9P202 907 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 PCDHB2Q9Y5E7 798 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 UMODL1Q5DID0 1318 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 LRRIQ4A6NIV6 560 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 TTC4O95801 387 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 GAS8O95995 478 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 ZSCAN5DPP0CG00 497 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 BRAFP15056 766 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 TCF4P15884 667 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 CCND2P30279 289 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 PRKCEQ02156 737 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 SNCBQ16143 134 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 ZNF394Q53GI3 561 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 LACTB2Q53H82 288 aaPredicted RBP10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 SNRNP48Q6IEG0 339 aaKnown RBP10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 TRPM8Q7Z2W7 1104 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 VSIG10LQ86VR7 867 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 SRRM1Q8IYB3 904 aaKnown RBP10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 RTKN2Q8IZC4 609 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 C12orf50Q8NA57 414 aaPredicted RBP10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 SLC17A8Q8NDX2 589 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 LPAR1Q92633 364 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 HAUS1Q96CS2 278 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 FAM212AQ96EL1 285 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 FBXL18Q96ME1 805 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 CYP26B1Q9NR63 512 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 ZNRF3Q9ULT6 936 aa10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 TPX2Q9ULW0 747 aaKnown RBP10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.53□□□□□ -0.72
UBE2D3-203ENST00000343106 CHUKO15111 745 aa10.52□□□□□ -0.73
UBE2D3-203ENST00000343106 RGS20O76081 388 aa10.52□□□□□ -0.73
UBE2D3-203ENST00000343106 DPEP1P16444 411 aa10.52□□□□□ -0.73
UBE2D3-203ENST00000343106 ATF7P17544 494 aaPredicted RBP10.52□□□□□ -0.73
UBE2D3-203ENST00000343106 HMGB2P26583 209 aaKnown RBP10.52□□□□□ -0.73
UBE2D3-203ENST00000343106 GNA15P30679 374 aa10.52□□□□□ -0.73
UBE2D3-203ENST00000343106 GCNT1Q02742 428 aa10.52□□□□□ -0.73
UBE2D3-203ENST00000343106 VSTM1Q6UX27 236 aa10.52□□□□□ -0.73
UBE2D3-203ENST00000343106 FAM228AQ86W67 206 aa10.52□□□□□ -0.73
UBE2D3-203ENST00000343106 SPIRE2Q8WWL2 714 aa10.52□□□□□ -0.73
UBE2D3-203ENST00000343106 ATP6V0A1Q93050 837 aa10.52□□□□□ -0.73
UBE2D3-203ENST00000343106 SGSM3Q96HU1 749 aa10.52□□□□□ -0.73
UBE2D3-203ENST00000343106 NTPCRQ9BSD7 190 aaKnown RBP10.52□□□□□ -0.73
UBE2D3-203ENST00000343106 TMEM109Q9BVC6 243 aa10.52□□□□□ -0.73
UBE2D3-203ENST00000343106 ROPN1BQ9BZX4 212 aaPredicted RBP10.52□□□□□ -0.73
UBE2D3-203ENST00000343106 KIAA1683Q9H0B3 1180 aa10.52□□□□□ -0.73
UBE2D3-203ENST00000343106 ROPN1Q9HAT0 212 aaPredicted RBP10.52□□□□□ -0.73
UBE2D3-203ENST00000343106 APOBEC3GQ9HC16 384 aaKnown RBP10.52□□□□□ -0.73
UBE2D3-203ENST00000343106 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.52□□□□□ -0.732e-8■□□□□ 10.5
UBE2D3-203ENST00000343106 NINJ2Q9NZG7 142 aa10.52□□□□□ -0.73
UBE2D3-203ENST00000343106 BAIAP2L1Q9UHR4 511 aa10.52□□□□□ -0.73
UBE2D3-203ENST00000343106 AGO2Q9UKV8 859 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms