RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 NKX2-3Q8TAU0 364 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 DEPDC1BQ8WUY9 529 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 BAP1Q92560 729 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 OTUD5Q96G74 571 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 MCEEQ96PE7 176 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 C17orf75Q9HAS0 396 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 PFDN4Q9NQP4 134 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 STOML1Q9UBI4 398 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 CNOT7Q9UIV1 285 aaKnown RBP7.6□□□□□ -1.19
VCAN-202ENST00000342785 AFG3L2Q9Y4W6 797 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 TACC3Q9Y6A5 838 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 FAM47DPA6NHR8 397 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 CCT8L1PA6NM43 557 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 NCF2P19878 526 aaPredicted RBP7.6□□□□□ -1.19
VCAN-202ENST00000342785 EN1Q05925 392 aaPredicted RBP7.6□□□□□ -1.19
VCAN-202ENST00000342785 SGSM1Q2NKQ1 1148 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 ACAD10Q6JQN1 1059 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 TRPM8Q7Z2W7 1104 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 COL23A1Q86Y22 540 aaPredicted RBP7.6□□□□□ -1.19
VCAN-202ENST00000342785 LRRC34Q8IZ02 419 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 TSEN2Q8NCE0 465 aaKnown RBP7.6□□□□□ -1.19
VCAN-202ENST00000342785 MED15Q96RN5 788 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 PDCD2LQ9BRP1 358 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 DHX35Q9H5Z1 703 aaKnown RBP7.6□□□□□ -1.19
VCAN-202ENST00000342785 SMG5Q9UPR3 1016 aaKnown RBP7.6□□□□□ -1.19
VCAN-202ENST00000342785 CST8O60676 142 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 WEE2P0C1S8 567 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 CASP5P51878 434 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 GABPAQ06546 454 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 PRPSAP1Q14558 356 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 TTLL4Q14679 1199 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 DBN1Q16643 649 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 SPOPLQ6IQ16 392 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 STYK1Q6J9G0 422 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 PTF1AQ7RTS3 328 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 KLF6Q99612 283 aaPredicted RBP7.6□□□□□ -1.19
VCAN-202ENST00000342785 DEFB129Q9H1M3 183 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 SEMA4AQ9H3S1 761 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 WDR35Q9P2L0 1181 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 PPP1R9AQ9ULJ8 1098 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 SPDYE2BA6NHP3 402 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 ZWINTO95229 277 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 SPDYE6P0CI01 402 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 RARRES1P49788 294 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 ROR1Q01973 937 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 FOXR1Q6PIV2 292 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 OTOP1Q7RTM1 612 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 DCLK2Q8N568 766 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 HIPK4Q8NE63 616 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 RAPGEF5Q92565 580 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 POP1Q99575 1024 aaKnown RBP7.6□□□□□ -1.19
VCAN-202ENST00000342785 IDI2Q9BXS1 227 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 KLHL8Q9P2G9 620 aaPredicted RBP7.6□□□□□ -1.19
VCAN-202ENST00000342785 TPX2Q9ULW0 747 aaKnown RBP7.6□□□□□ -1.19
VCAN-202ENST00000342785 AGAP1Q9UPQ3 857 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 NOL3O60936 208 aaKnown RBP7.6□□□□□ -1.19
VCAN-202ENST00000342785 DDR1Q08345 913 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 ZNF677Q86XU0 584 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 RDM1Q8NG50 284 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 KCNV2Q8TDN2 545 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 GPRASP2Q96D09 838 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 SLC10A4Q96EP9 437 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 NIF3L1Q9GZT8 377 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 AP5M1Q9H0R1 490 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 VPS11Q9H270 941 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 CCDC68Q9H2F9 335 aa7.6□□□□□ -1.19
VCAN-202ENST00000342785 C19orf81C9J6K1 198 aa7.59□□□□□ -1.19
VCAN-202ENST00000342785 EXTL3O43909 919 aa7.59□□□□□ -1.19
VCAN-202ENST00000342785 TXNP10599 105 aaKnown RBP7.59□□□□□ -1.19
VCAN-202ENST00000342785 KCNMA1Q12791 1236 aa7.59□□□□□ -1.19
VCAN-202ENST00000342785 HEATR6Q6AI08 1181 aaKnown RBP7.59□□□□□ -1.19
VCAN-202ENST00000342785 GPAT2Q6NUI2 795 aa7.59□□□□□ -1.19
VCAN-202ENST00000342785 CDR2LQ86X02 465 aaPredicted RBP7.59□□□□□ -1.19
VCAN-202ENST00000342785 TTC39CQ8N584 583 aa7.59□□□□□ -1.19
VCAN-202ENST00000342785 DHX38Q92620 1227 aaKnown RBP7.59□□□□□ -1.19
VCAN-202ENST00000342785 SLC13A1Q9BZW2 595 aa7.59□□□□□ -1.19
VCAN-202ENST00000342785 LPXNO60711 386 aa7.59□□□□□ -1.19
VCAN-202ENST00000342785 CAND2O75155 1236 aa7.59□□□□□ -1.19
VCAN-202ENST00000342785 MMEL1Q495T6 779 aa7.59□□□□□ -1.19
VCAN-202ENST00000342785 C1orf228Q6PIY5 440 aa7.59□□□□□ -1.19
VCAN-202ENST00000342785 EPS8L3Q8TE67 593 aaKnown RBP7.59□□□□□ -1.19
VCAN-202ENST00000342785 BFARQ9NZS9 450 aa7.59□□□□□ -1.19
VCAN-202ENST00000342785 A8MXQ7 604 aa7.59□□□□□ -1.19
VCAN-202ENST00000342785 HUS1O60921 280 aa7.59□□□□□ -1.19
VCAN-202ENST00000342785 SRGAP2BP0DMP2 458 aa7.59□□□□□ -1.19
VCAN-202ENST00000342785 PTENP60484 403 aa7.59□□□□□ -1.19
VCAN-202ENST00000342785 ACTR2P61160 394 aa7.59□□□□□ -1.19
VCAN-202ENST00000342785 NPY5RQ15761 445 aa7.59□□□□□ -1.19
VCAN-202ENST00000342785 SEZ6Q53EL9 994 aa7.59□□□□□ -1.19
VCAN-202ENST00000342785 SYCP2LQ5T4T6 812 aa7.59□□□□□ -1.19
VCAN-202ENST00000342785 C15orf52Q6ZUT6 534 aaKnown RBP7.59□□□□□ -1.19
VCAN-202ENST00000342785 APOBEC3FQ8IUX4 373 aaKnown RBP7.59□□□□□ -1.19
VCAN-202ENST00000342785 NUDCD3Q8IVD9 361 aa7.59□□□□□ -1.19
VCAN-202ENST00000342785 FEZF2Q8TBJ5 459 aa7.59□□□□□ -1.19
VCAN-202ENST00000342785 SYTL5Q8TDW5 730 aaPredicted RBP7.59□□□□□ -1.19
VCAN-202ENST00000342785 ERP27Q96DN0 273 aa7.59□□□□□ -1.19
VCAN-202ENST00000342785 USH1CQ9Y6N9 552 aa7.59□□□□□ -1.19
VCAN-202ENST00000342785 CAMTA1Q9Y6Y1 1673 aa7.59□□□□□ -1.19
VCAN-202ENST00000342785 GTF2H1P32780 548 aa7.59□□□□□ -1.19
VCAN-202ENST00000342785 PRKCIP41743 596 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms