RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 CXCL9Q07325 125 aa13.33□□□□□ -0.28
LMX1A-202ENST00000342310 PPP2R5CQ13362 524 aa13.33□□□□□ -0.28
LMX1A-202ENST00000342310 DHX34Q14147 1143 aaKnown RBP13.33□□□□□ -0.28
LMX1A-202ENST00000342310 PALM2Q8IXS6 379 aa13.33□□□□□ -0.28
LMX1A-202ENST00000342310 FBF1Q8TES7 1133 aa13.33□□□□□ -0.28
LMX1A-202ENST00000342310 TRAPPC12Q8WVT3 735 aa13.33□□□□□ -0.28
LMX1A-202ENST00000342310 TMEM237Q96Q45 408 aa13.33□□□□□ -0.28
LMX1A-202ENST00000342310 MKNK1Q9BUB5 465 aa13.33□□□□□ -0.28
LMX1A-202ENST00000342310 APOL6Q9BWW8 343 aa13.33□□□□□ -0.28
LMX1A-202ENST00000342310 AGO4Q9HCK5 861 aaKnown RBP13.33□□□□□ -0.28
LMX1A-202ENST00000342310 HEY1Q9Y5J3 304 aa13.33□□□□□ -0.28
LMX1A-202ENST00000342310 STK24Q9Y6E0 443 aa13.33□□□□□ -0.28
LMX1A-202ENST00000342310 MYH11P35749 1972 aa13.33□□□□□ -0.28
LMX1A-202ENST00000342310 TMEM191BP0C7N4 346 aa13.33□□□□□ -0.28
LMX1A-202ENST00000342310 KITP10721 976 aa13.33□□□□□ -0.28
LMX1A-202ENST00000342310 RAP1GAPP47736 663 aa13.33□□□□□ -0.28
LMX1A-202ENST00000342310 ATP11AP98196 1134 aa13.33□□□□□ -0.28
LMX1A-202ENST00000342310 SETDB1Q15047 1291 aa13.33□□□□□ -0.28
LMX1A-202ENST00000342310 CCDC6Q16204 474 aa13.33□□□□□ -0.28
LMX1A-202ENST00000342310 GPD1LQ8N335 351 aa13.33□□□□□ -0.28
LMX1A-202ENST00000342310 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.33□□□□□ -0.28
LMX1A-202ENST00000342310 RSAD2Q8WXG1 361 aa13.33□□□□□ -0.28
LMX1A-202ENST00000342310 RSRC1Q96IZ7 334 aaKnown RBP13.33□□□□□ -0.28
LMX1A-202ENST00000342310 PDCD2LQ9BRP1 358 aa13.33□□□□□ -0.28
LMX1A-202ENST00000342310 WNT8AQ9H1J5 351 aa13.33□□□□□ -0.28
LMX1A-202ENST00000342310 ZNF408Q9H9D4 720 aa13.33□□□□□ -0.28
LMX1A-202ENST00000342310 PFASO15067 1338 aa13.32□□□□□ -0.28
LMX1A-202ENST00000342310 FAM187AA6NFU0 413 aa13.32□□□□□ -0.28
LMX1A-202ENST00000342310 ENO4A6NNW6 628 aa13.32□□□□□ -0.28
LMX1A-202ENST00000342310 F8VP50 259 aa13.32□□□□□ -0.28
LMX1A-202ENST00000342310 GTF2H1P32780 548 aa13.32□□□□□ -0.28
LMX1A-202ENST00000342310 NUMBP49757 651 aa13.32□□□□□ -0.28
LMX1A-202ENST00000342310 CASC4Q6P4E1 433 aa13.32□□□□□ -0.28
LMX1A-202ENST00000342310 MOXD1Q6UVY6 613 aa13.32□□□□□ -0.28
LMX1A-202ENST00000342310 LRIG3Q6UXM1 1119 aa13.32□□□□□ -0.28
LMX1A-202ENST00000342310 TRPM8Q7Z2W7 1104 aa13.32□□□□□ -0.28
LMX1A-202ENST00000342310 CCDC60Q8IWA6 550 aaPredicted RBP13.32□□□□□ -0.28
LMX1A-202ENST00000342310 IWS1Q96ST2 819 aa13.32□□□□□ -0.28
LMX1A-202ENST00000342310 FHDC1Q9C0D6 1143 aaPredicted RBP13.32□□□□□ -0.28
LMX1A-202ENST00000342310 IQCGQ9H095 443 aaKnown RBP13.32□□□□□ -0.28
LMX1A-202ENST00000342310 PIH1D1Q9NWS0 290 aaKnown RBP13.32□□□□□ -0.28
LMX1A-202ENST00000342310 CCT8L1PA6NM43 557 aa13.32□□□□□ -0.28
LMX1A-202ENST00000342310 IGF2BP3O00425 579 aaKnown RBP eCLIP13.32□□□□□ -0.28
LMX1A-202ENST00000342310 CDH8P55286 799 aa13.32□□□□□ -0.28
LMX1A-202ENST00000342310 CDR2Q01850 454 aa13.32□□□□□ -0.28
LMX1A-202ENST00000342310 ANKRD20A8PQ5CZ79 823 aa13.32□□□□□ -0.28
LMX1A-202ENST00000342310 SCARA3Q6AZY7 606 aa13.32□□□□□ -0.28
LMX1A-202ENST00000342310 GADL1Q6ZQY3 521 aa13.32□□□□□ -0.28
LMX1A-202ENST00000342310 RHPN2Q8IUC4 686 aa13.32□□□□□ -0.28
LMX1A-202ENST00000342310 C7orf31Q8N865 590 aa13.32□□□□□ -0.28
LMX1A-202ENST00000342310 RBBP8NLQ8NC74 664 aaPredicted RBP13.32□□□□□ -0.28
LMX1A-202ENST00000342310 CNOT10Q9H9A5 744 aaKnown RBP13.32□□□□□ -0.28
LMX1A-202ENST00000342310 JPH1Q9HDC5 661 aaPredicted RBP13.32□□□□□ -0.28
LMX1A-202ENST00000342310 TPX2Q9ULW0 747 aaKnown RBP13.32□□□□□ -0.28
LMX1A-202ENST00000342310 MAD1L1Q9Y6D9 718 aa13.32□□□□□ -0.28
LMX1A-202ENST00000342310 CCDC195A0A1B0GUA6 201 aa13.31□□□□□ -0.28
LMX1A-202ENST00000342310 CHRNB2P17787 502 aa13.31□□□□□ -0.28
LMX1A-202ENST00000342310 TAS2R40P59535 323 aa13.31□□□□□ -0.28
LMX1A-202ENST00000342310 MXRA7P84157 204 aa13.31□□□□□ -0.28
LMX1A-202ENST00000342310 PPP6R3Q5H9R7 873 aaPredicted RBP13.31□□□□□ -0.28
LMX1A-202ENST00000342310 MSL3Q8N5Y2 521 aaKnown RBP13.31□□□□□ -0.28
LMX1A-202ENST00000342310 TTC17Q96AE7 1141 aa13.31□□□□□ -0.28
LMX1A-202ENST00000342310 RIT2Q99578 217 aa13.31□□□□□ -0.28
LMX1A-202ENST00000342310 MTMR12Q9C0I1 747 aa13.31□□□□□ -0.28
LMX1A-202ENST00000342310 TBC1D22BQ9NU19 505 aa13.31□□□□□ -0.28
LMX1A-202ENST00000342310 MARCOQ9UEW3 520 aaPredicted RBP13.31□□□□□ -0.28
LMX1A-202ENST00000342310 ATP2A1O14983 1001 aa13.31□□□□□ -0.28
LMX1A-202ENST00000342310 ICAM1P05362 532 aa13.31□□□□□ -0.28
LMX1A-202ENST00000342310 TARSP26639 723 aaKnown RBP13.31□□□□□ -0.28
LMX1A-202ENST00000342310 AUHQ13825 339 aaKnown RBP13.31□□□□□ -0.28
LMX1A-202ENST00000342310 FASTKD3Q14CZ7 662 aaKnown RBP13.31□□□□□ -0.28
LMX1A-202ENST00000342310 PGM5Q15124 567 aa13.31□□□□□ -0.28
LMX1A-202ENST00000342310 EXOC3L1Q86VI1 746 aa13.31□□□□□ -0.28
LMX1A-202ENST00000342310 SESTD1Q86VW0 696 aa13.31□□□□□ -0.28
LMX1A-202ENST00000342310 GLIS1Q8NBF1 620 aa13.31□□□□□ -0.28
LMX1A-202ENST00000342310 OR5B17Q8NGF7 314 aa13.31□□□□□ -0.28
LMX1A-202ENST00000342310 RUNDC3BQ96NL0 473 aa13.31□□□□□ -0.28
LMX1A-202ENST00000342310 HERPUD2Q9BSE4 406 aa13.31□□□□□ -0.28
LMX1A-202ENST00000342310 GPR88Q9GZN0 384 aa13.31□□□□□ -0.28
LMX1A-202ENST00000342310 SLC12A6Q9UHW9 1150 aa13.31□□□□□ -0.28
LMX1A-202ENST00000342310 MYH7BA7E2Y1 1941 aa13.31□□□□□ -0.28
LMX1A-202ENST00000342310 A0A1B0GUA9 196 aa13.31□□□□□ -0.28
LMX1A-202ENST00000342310 PDHA1P08559 390 aa13.31□□□□□ -0.28
LMX1A-202ENST00000342310 RCN2Q14257 317 aa13.31□□□□□ -0.28
LMX1A-202ENST00000342310 WDR72Q3MJ13 1102 aa13.31□□□□□ -0.28
LMX1A-202ENST00000342310 CIAPIN1Q6FI81 312 aa13.31□□□□□ -0.28
LMX1A-202ENST00000342310 RFX6Q8HWS3 928 aa13.31□□□□□ -0.28
LMX1A-202ENST00000342310 CYP4X1Q8N118 509 aa13.31□□□□□ -0.28
LMX1A-202ENST00000342310 RNF149Q8NC42 400 aa13.31□□□□□ -0.28
LMX1A-202ENST00000342310 ERP27Q96DN0 273 aa13.31□□□□□ -0.28
LMX1A-202ENST00000342310 STAMBPL1Q96FJ0 436 aa13.31□□□□□ -0.28
LMX1A-202ENST00000342310 SNF8Q96H20 258 aa13.31□□□□□ -0.28
LMX1A-202ENST00000342310 DEFB129Q9H1M3 183 aa13.31□□□□□ -0.28
LMX1A-202ENST00000342310 GTF3C4Q9UKN8 822 aa13.31□□□□□ -0.28
LMX1A-202ENST00000342310 DNPEPQ9ULA0 475 aa13.31□□□□□ -0.28
LMX1A-202ENST00000342310 H0YGN5 161 aa13.3□□□□□ -0.28
LMX1A-202ENST00000342310 DIAPH2O60879 1101 aa13.3□□□□□ -0.28
LMX1A-202ENST00000342310 ELF1P32519 619 aa13.3□□□□□ -0.28
LMX1A-202ENST00000342310 RGS7P49802 495 aa13.3□□□□□ -0.28
LMX1A-202ENST00000342310 PPP2R5EQ16537 467 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms