RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 NTPCRQ9BSD7 190 aaKnown RBP11.27□□□□□ -0.61
TPM3-207ENST00000341372 PLVAPQ9BX97 442 aa11.27□□□□□ -0.61
TPM3-207ENST00000341372 CERS4Q9HA82 394 aa11.27□□□□□ -0.61
TPM3-207ENST00000341372 NPHS2Q9NP85 383 aa11.27□□□□□ -0.61
TPM3-207ENST00000341372 LMCD1Q9NZU5 365 aa11.27□□□□□ -0.61
TPM3-207ENST00000341372 CHMP5Q9NZZ3 219 aa11.27□□□□□ -0.61
TPM3-207ENST00000341372 CCDC39Q9UFE4 941 aa11.27□□□□□ -0.61
TPM3-207ENST00000341372 PHLPP2Q6ZVD8 1323 aa11.27□□□□□ -0.61
TPM3-207ENST00000341372 TCHHQ07283 1943 aa11.27□□□□□ -0.61
TPM3-207ENST00000341372 ZMYM2Q9UBW7 1377 aa11.27□□□□□ -0.61
TPM3-207ENST00000341372 COL6A3P12111 3177 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 A0A1B0GUA9 196 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 TBKBP1A7MCY6 615 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 B4GALT5O43286 388 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 GBP2P32456 591 aaPredicted RBP11.26□□□□□ -0.61
TPM3-207ENST00000341372 BMPR1AP36894 532 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 NPTX2P47972 431 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 ZNF131P52739 623 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 SMTNP53814 917 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 DMP1Q13316 513 aaPredicted RBP11.26□□□□□ -0.61
TPM3-207ENST00000341372 C2orf27AQ580R0 203 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 TREML1Q86YW5 311 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 CNNM3Q8NE01 707 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 DEPTORQ8TB45 409 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 GDPD5Q8WTR4 605 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 P2RX5Q93086 422 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 UBP1Q9NZI7 540 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 CFAP45Q9UL16 551 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 PCDHB2Q9Y5E7 798 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 A0A087X0B3 334 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 H3BNC9 293 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 RFXAPO00287 272 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 ACKR2O00590 384 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 INPPL1O15357 1258 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 TNFRSF21O75509 655 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 EDN1P05305 212 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 PRKCBP05771 671 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 PLS3P13797 630 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 PEX3P56589 373 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 NCBP1Q09161 790 aaKnown RBP11.26□□□□□ -0.61
TPM3-207ENST00000341372 MAPK6Q16659 721 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 C21orf62-AS1Q17RA5 79 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 PAN2Q504Q3 1202 aaKnown RBP11.26□□□□□ -0.61
TPM3-207ENST00000341372 GPBP1Q86WP2 473 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 LRRC43Q8N309 656 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 SMG8Q8ND04 991 aaKnown RBP11.26□□□□□ -0.61
TPM3-207ENST00000341372 RASSF8Q8NHQ8 419 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 REEP2Q9BRK0 252 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 KIFC3Q9BVG8 833 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 CWH43Q9H720 699 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 POLD4Q9HCU8 107 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 KCNG1Q9UIX4 513 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 RCOR1Q9UKL0 485 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 MTCH2Q9Y6C9 303 aa11.26□□□□□ -0.61
TPM3-207ENST00000341372 PLXNA4Q9HCM2 1894 aa11.25□□□□□ -0.61
TPM3-207ENST00000341372 CTNNB1P35222 781 aa11.25□□□□□ -0.61
TPM3-207ENST00000341372 DHX8Q14562 1220 aaKnown RBP11.25□□□□□ -0.61
TPM3-207ENST00000341372 SLC27A1Q6PCB7 646 aa11.25□□□□□ -0.61
TPM3-207ENST00000341372 AGMOQ6ZNB7 445 aa11.25□□□□□ -0.61
TPM3-207ENST00000341372 CCDC73Q6ZRK6 1079 aa11.25□□□□□ -0.61
TPM3-207ENST00000341372 LRRC55Q6ZSA7 311 aa11.25□□□□□ -0.61
TPM3-207ENST00000341372 MAFAQ8NHW3 353 aaPredicted RBP11.25□□□□□ -0.61
TPM3-207ENST00000341372 PGBD4Q96DM1 585 aa11.25□□□□□ -0.61
TPM3-207ENST00000341372 CPB2Q96IY4 423 aa11.25□□□□□ -0.61
TPM3-207ENST00000341372 TMEM74Q96NL1 305 aa11.25□□□□□ -0.61
TPM3-207ENST00000341372 NT5C1AQ9BXI3 368 aa11.25□□□□□ -0.61
TPM3-207ENST00000341372 SRRTQ9BXP5 876 aaKnown RBP11.25□□□□□ -0.61
TPM3-207ENST00000341372 EIF2AQ9BY44 585 aaKnown RBP11.25□□□□□ -0.61
TPM3-207ENST00000341372 MRPL9Q9BYD2 267 aaKnown RBP11.25□□□□□ -0.61
TPM3-207ENST00000341372 CDV3Q9UKY7 258 aaKnown RBP11.25□□□□□ -0.61
TPM3-207ENST00000341372 MTUS1Q9ULD2 1270 aa11.25□□□□□ -0.61
TPM3-207ENST00000341372 IPPQ9Y573 584 aa11.25□□□□□ -0.61
TPM3-207ENST00000341372 MEIS3P2A8K0S8 358 aa11.25□□□□□ -0.61
TPM3-207ENST00000341372 N4BP3O15049 544 aa11.25□□□□□ -0.61
TPM3-207ENST00000341372 GIT2Q14161 759 aa11.25□□□□□ -0.61
TPM3-207ENST00000341372 RRAGBQ5VZM2 374 aa11.25□□□□□ -0.61
TPM3-207ENST00000341372 SHC4Q6S5L8 630 aa11.25□□□□□ -0.61
TPM3-207ENST00000341372 DDX42Q86XP3 938 aaKnown RBP eCLIP11.25□□□□□ -0.61
TPM3-207ENST00000341372 TMEM161BQ8NDZ6 487 aa11.25□□□□□ -0.61
TPM3-207ENST00000341372 LPPQ93052 612 aa11.25□□□□□ -0.61
TPM3-207ENST00000341372 C11orf84Q9BUA3 381 aaPredicted RBP11.25□□□□□ -0.61
TPM3-207ENST00000341372 PDZD7Q9H5P4 517 aa11.25□□□□□ -0.61
TPM3-207ENST00000341372 KMT5AQ9NQR1 393 aa11.25□□□□□ -0.61
TPM3-207ENST00000341372 HCN4Q9Y3Q4 1203 aa11.25□□□□□ -0.61
TPM3-207ENST00000341372 NPHP3-ACAD11A0A0J9YXS1 232 aa11.24□□□□□ -0.61
TPM3-207ENST00000341372 OFD1O75665 1012 aa11.24□□□□□ -0.61
TPM3-207ENST00000341372 ASMTLO95671 621 aa11.24□□□□□ -0.61
TPM3-207ENST00000341372 LAG3P18627 525 aa11.24□□□□□ -0.61
TPM3-207ENST00000341372 SCP2P22307 547 aa11.24□□□□□ -0.61
TPM3-207ENST00000341372 NCKAP1LP55160 1127 aa11.24□□□□□ -0.61
TPM3-207ENST00000341372 KRT85P78386 507 aa11.24□□□□□ -0.61
TPM3-207ENST00000341372 PRPF4BQ13523 1007 aaKnown RBP11.24□□□□□ -0.61
TPM3-207ENST00000341372 ABI1Q8IZP0 508 aa11.24□□□□□ -0.61
TPM3-207ENST00000341372 RNF169Q8NCN4 708 aa11.24□□□□□ -0.61
TPM3-207ENST00000341372 FIZ1Q96SL8 496 aa11.24□□□□□ -0.61
TPM3-207ENST00000341372 LMAN2LQ9H0V9 348 aa11.24□□□□□ -0.61
TPM3-207ENST00000341372 CUEDC2Q9H467 287 aa11.24□□□□□ -0.61
TPM3-207ENST00000341372 RSAD1Q9HA92 442 aa11.24□□□□□ -0.61
TPM3-207ENST00000341372 UBN1Q9NPG3 1134 aa11.24□□□□□ -0.61
TPM3-207ENST00000341372 TMPRSS4Q9NRS4 437 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms