RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 C4AP0C0L4 1744 aa11.75□□□□□ -0.53
SEMA4D-201ENST00000339861 C4BP0C0L5 1744 aa11.75□□□□□ -0.53
SEMA4D-201ENST00000339861 CICQ96RK0 1608 aaPredicted RBP11.75□□□□□ -0.53
SEMA4D-201ENST00000339861 DISP2A7MBM2 1401 aa11.75□□□□□ -0.53
SEMA4D-201ENST00000339861 CCDC160A6NGH7 325 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 CDH16O75309 829 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 ITIH2P19823 946 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 PRKCEQ02156 737 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 LMNB2Q03252 620 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 MCPH1Q8NEM0 835 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 ZBTB45Q96K62 511 aaPredicted RBP11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 CYTH2Q99418 400 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 SIX2Q9NPC8 291 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 G3BP2Q9UN86 482 aaKnown RBP11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 ARL2BPQ9Y2Y0 163 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 TMX2Q9Y320 296 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 BCL9LQ86UU0 1499 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 TXNDC9O14530 226 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 YY1P25490 414 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 PSMC4P43686 418 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 RASSF2P50749 326 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 HYIQ5T013 277 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 TRMT10CQ7L0Y3 403 aaKnown RBP11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 PDIK1LQ8N165 341 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 STAMBPL1Q96FJ0 436 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 SAE1Q9UBE0 346 aaPredicted RBP11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 TRIM33Q9UPN9 1127 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 NUP98P52948 1817 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 NUP188Q5SRE5 1749 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 N4BP2Q86UW6 1770 aaPredicted RBP11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 CYP3A7-CYP3A51PA0A087WV96 503 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 DNM1LO00429 736 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 MAPK13O15264 365 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 ATP9AO75110 1047 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 CYP3A7P24462 503 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 POLR2BP30876 1174 aaKnown RBP11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 GTF2H1P32780 548 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 JAG1P78504 1218 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 TSNAXIP1Q2TAA8 658 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 DUPD1Q68J44 220 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 PPM1NQ8N819 430 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 PDCD7Q8N8D1 485 aaKnown RBP11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 C1orf131Q8NDD1 294 aaKnown RBP11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 DTX3LQ8TDB6 740 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 NSMCE1Q8WV22 266 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 JPH1Q9HDC5 661 aaPredicted RBP11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 MARCOQ9UEW3 520 aaPredicted RBP11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 FRMPD4Q14CM0 1322 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 TRPM3Q9HCF6 1732 aaPredicted RBP11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 MCF2LO15068 1137 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 CSDE1O75534 798 aaKnown RBP11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 GGPS1O95749 300 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 ETS1P14921 441 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 ELF1P32519 619 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 MARSP56192 900 aaKnown RBP11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 PSMC1P62191 440 aaKnown RBP11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 TTC27Q6P3X3 843 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 C1orf228Q6PIY5 440 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 CEP128Q6ZU80 1094 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 CD302Q8IX05 232 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 TMEM35BQ8NCS4 154 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 GMCL1P1Q8NEA9 526 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 FAM151AQ8WW52 585 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 SEMA4DQ92854 862 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 HEXIM2Q96MH2 286 aaKnown RBP11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 TMEM121Q9BTD3 319 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 PCDHB2Q9Y5E7 798 aa11.74□□□□□ -0.53
SEMA4D-201ENST00000339861 MYBL1P10243 752 aa11.73□□□□□ -0.53
SEMA4D-201ENST00000339861 SLC20A2Q08357 652 aa11.73□□□□□ -0.53
SEMA4D-201ENST00000339861 DRP2Q13474 957 aa11.73□□□□□ -0.53
SEMA4D-201ENST00000339861 NCOA4Q13772 614 aa11.73□□□□□ -0.53
SEMA4D-201ENST00000339861 SAMD7Q7Z3H4 446 aa11.73□□□□□ -0.53
SEMA4D-201ENST00000339861 OSBPL7Q9BZF2 842 aa11.73□□□□□ -0.53
SEMA4D-201ENST00000339861 UBN1Q9NPG3 1134 aa11.73□□□□□ -0.53
SEMA4D-201ENST00000339861 NRBP2Q9NSY0 501 aa11.73□□□□□ -0.53
SEMA4D-201ENST00000339861 SLC9A2Q9UBY0 812 aa11.73□□□□□ -0.53
SEMA4D-201ENST00000339861 SCINQ9Y6U3 715 aa11.73□□□□□ -0.53
SEMA4D-201ENST00000339861 PHRF1Q9P1Y6 1649 aaKnown RBP11.73□□□□□ -0.53
SEMA4D-201ENST00000339861 DDX3YO15523 660 aaKnown RBP11.73□□□□□ -0.53
SEMA4D-201ENST00000339861 HOXA10P31260 410 aaPredicted RBP11.73□□□□□ -0.53
SEMA4D-201ENST00000339861 UGCGQ16739 394 aa11.73□□□□□ -0.53
SEMA4D-201ENST00000339861 ZNF699Q32M78 642 aa11.73□□□□□ -0.53
SEMA4D-201ENST00000339861 CRY2Q49AN0 593 aa11.73□□□□□ -0.53
SEMA4D-201ENST00000339861 CFAP157Q5JU67 520 aa11.73□□□□□ -0.53
SEMA4D-201ENST00000339861 FAXCQ5TGI0 409 aa11.73□□□□□ -0.53
SEMA4D-201ENST00000339861 SULF1Q8IWU6 871 aa11.73□□□□□ -0.53
SEMA4D-201ENST00000339861 LRRC71Q8N4P6 559 aa11.73□□□□□ -0.53
SEMA4D-201ENST00000339861 FLAD1Q8NFF5 587 aa11.73□□□□□ -0.53
SEMA4D-201ENST00000339861 NSUN6Q8TEA1 469 aaKnown RBP11.73□□□□□ -0.53
SEMA4D-201ENST00000339861 ZKSCAN4Q969J2 545 aaPredicted RBP11.73□□□□□ -0.53
SEMA4D-201ENST00000339861 TXLNGQ9NUQ3 528 aa11.73□□□□□ -0.53
SEMA4D-201ENST00000339861 HAO1Q9UJM8 370 aa11.73□□□□□ -0.53
SEMA4D-201ENST00000339861 NAALADL1Q9UQQ1 740 aa11.73□□□□□ -0.53
SEMA4D-201ENST00000339861 GH1P01241 217 aa11.73□□□□□ -0.53
SEMA4D-201ENST00000339861 HMGB2P26583 209 aaKnown RBP11.73□□□□□ -0.53
SEMA4D-201ENST00000339861 CPA2P48052 419 aa11.73□□□□□ -0.53
SEMA4D-201ENST00000339861 CIAPIN1Q6FI81 312 aa11.73□□□□□ -0.53
SEMA4D-201ENST00000339861 PAF1Q8N7H5 531 aa11.73□□□□□ -0.53
SEMA4D-201ENST00000339861 LENG9Q96B70 501 aa11.73□□□□□ -0.53
SEMA4D-201ENST00000339861 TMEM237Q96Q45 408 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms