RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 STK32AQ8WU08 396 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 THTPAQ9BU02 230 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 NXF1Q9UBU9 619 aaKnown RBP13.18□□□□□ -0.3
RIOK3-201ENST00000339486 SPEF2Q9C093 1822 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 FAM86B1E9PN63 330 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 HNRNPCL1O60812 293 aaKnown RBP13.18□□□□□ -0.3
RIOK3-201ENST00000339486 UPP2O95045 317 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 FAM86B2P0C5J1 330 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 PSMC4P43686 418 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 CUL3Q13618 768 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 MAP7D1Q3KQU3 841 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 WLSQ5T9L3 541 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 THEMIS2Q5TEJ8 643 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 RGS9BPQ6ZS82 235 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 DHX38Q92620 1227 aaKnown RBP13.18□□□□□ -0.3
RIOK3-201ENST00000339486 NSL1Q96IY1 281 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 CYP4F11Q9HBI6 524 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 LRRC4BQ9NT99 713 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 PCYOX1Q9UHG3 505 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 ASTN1O14525 1302 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 AFF2P51816 1311 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 IGSF9BQ9UPX0 1349 aa13.18□□□□□ -0.3
RIOK3-201ENST00000339486 EML1O00423 815 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 TRPA1O75762 1119 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 CREB1P16220 341 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 RIPK1Q13546 671 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 SLC35G1Q2M3R5 365 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 ACAD10Q6JQN1 1059 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 CBWD2Q8IUF1 395 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 TBC1D16Q8TBP0 767 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 PIP4K2CQ8TBX8 421 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 RANBP17Q9H2T7 1088 aaKnown RBP13.17□□□□□ -0.3
RIOK3-201ENST00000339486 SLCO1B3Q9NPD5 702 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 M0R2N6 131 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 CHKAP35790 457 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 MTFR1Q15390 333 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 MTERF2Q49AM1 385 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 RASSF3Q86WH2 238 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 PALB2Q86YC2 1186 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 MCF2L2Q86YR7 1114 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 SLC26A7Q8TE54 656 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 HSPH1Q92598 858 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 ACSF2Q96CM8 615 aaPredicted RBP13.17□□□□□ -0.3
RIOK3-201ENST00000339486 TDRD3Q9H7E2 651 aaKnown RBP13.17□□□□□ -0.3
RIOK3-201ENST00000339486 UBAP1LF5GYI3 381 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 H0YGN5 161 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 H3BRJ5 948 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 DDX3YO15523 660 aaKnown RBP13.17□□□□□ -0.3
RIOK3-201ENST00000339486 TMEM191BP0C7N4 346 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 CCNHP51946 323 aaPredicted RBP13.17□□□□□ -0.3
RIOK3-201ENST00000339486 DYNC1I2Q13409 638 aaKnown RBP13.17□□□□□ -0.3
RIOK3-201ENST00000339486 SLC10A5Q5PT55 438 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 FOXR2Q6PJQ5 311 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 FITM2Q8N6M3 262 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 ABTB1Q969K4 478 aaPredicted RBP13.17□□□□□ -0.3
RIOK3-201ENST00000339486 FAF2Q96CS3 445 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 Q9H521 79 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 IP6K2Q9UHH9 426 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 TMEM59LQ9UK28 342 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 AGAP1Q9UPQ3 857 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 PCDHA3Q9Y5H8 950 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 NFS1Q9Y697 457 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 BCL9O00512 1426 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 TNS2Q63HR2 1409 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 CREB3O43889 395 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 ENTPD5O75356 428 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 SNUPNO95149 360 aaKnown RBP13.17□□□□□ -0.3
RIOK3-201ENST00000339486 MTMR1Q13613 665 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 DLGAP5Q15398 846 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 SPRED3Q2MJR0 410 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 CDC42EP5Q6NZY7 148 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 NUDCD3Q8IVD9 361 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 WDR75Q8IWA0 830 aaKnown RBP13.17□□□□□ -0.3
RIOK3-201ENST00000339486 GSDMBQ8TAX9 411 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 ATP6V0A1Q93050 837 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 DDX27Q96GQ7 796 aaKnown RBP13.17□□□□□ -0.3
RIOK3-201ENST00000339486 MANSC1Q9H8J5 431 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 PRR12Q9ULL5 1215 aa13.17□□□□□ -0.3
RIOK3-201ENST00000339486 DISP2A7MBM2 1401 aa13.16□□□□□ -0.3
RIOK3-201ENST00000339486 hCG_2014768A0A024R1R8 64 aa13.16□□□□□ -0.3
RIOK3-201ENST00000339486 P4HA2O15460 535 aa13.16□□□□□ -0.3
RIOK3-201ENST00000339486 PTPN4P29074 926 aa13.16□□□□□ -0.3
RIOK3-201ENST00000339486 TFAMQ00059 246 aaKnown RBP13.16□□□□□ -0.3
RIOK3-201ENST00000339486 CENPCQ03188 943 aa13.16□□□□□ -0.3
RIOK3-201ENST00000339486 SNX30Q5VWJ9 437 aa13.16□□□□□ -0.3
RIOK3-201ENST00000339486 NXNQ6DKJ4 435 aa13.16□□□□□ -0.3
RIOK3-201ENST00000339486 PCGF5Q86SE9 256 aa13.16□□□□□ -0.3
RIOK3-201ENST00000339486 TMEM35BQ8NCS4 154 aa13.16□□□□□ -0.3
RIOK3-201ENST00000339486 TBC1D10AQ9BXI6 508 aa13.16□□□□□ -0.3
RIOK3-201ENST00000339486 FOXP3Q9BZS1 431 aa13.16□□□□□ -0.3
RIOK3-201ENST00000339486 TCRBV7S2A1N4TA0A589 114 aa13.16□□□□□ -0.3
RIOK3-201ENST00000339486 TISP43B9A030 160 aa13.16□□□□□ -0.3
RIOK3-201ENST00000339486 H0YCG3 227 aa13.16□□□□□ -0.3
RIOK3-201ENST00000339486 ZBED4O75132 1171 aa13.16□□□□□ -0.3
RIOK3-201ENST00000339486 ALDH18A1P54886 795 aaKnown RBP13.16□□□□□ -0.3
RIOK3-201ENST00000339486 NFIAQ12857 509 aa13.16□□□□□ -0.3
RIOK3-201ENST00000339486 PCNX4Q63HM2 1172 aa13.16□□□□□ -0.3
RIOK3-201ENST00000339486 MOXD1Q6UVY6 613 aa13.16□□□□□ -0.3
RIOK3-201ENST00000339486 PIGWQ7Z7B1 504 aa13.16□□□□□ -0.3
RIOK3-201ENST00000339486 NOP9Q86U38 636 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms