RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 CYP2C19P33261 490 aa15.87■□□□□ 0.13
C9orf47-201ENST00000334490 TAF1BQ53T94 588 aaPredicted RBP15.87■□□□□ 0.13
C9orf47-201ENST00000334490 NUDT18Q6ZVK8 323 aa15.87■□□□□ 0.13
C9orf47-201ENST00000334490 ELOA2Q8IYF1 753 aaPredicted RBP15.87■□□□□ 0.13
C9orf47-201ENST00000334490 SLC35G2Q8TBE7 412 aa15.87■□□□□ 0.13
C9orf47-201ENST00000334490 SOCS4Q8WXH5 440 aa15.87■□□□□ 0.13
C9orf47-201ENST00000334490 CHMP6Q96FZ7 201 aa15.87■□□□□ 0.13
C9orf47-201ENST00000334490 SENP7Q9BQF6 1050 aa15.87■□□□□ 0.13
C9orf47-201ENST00000334490 COLEC11Q9BWP8 271 aa15.87■□□□□ 0.13
C9orf47-201ENST00000334490 VTA1Q9NP79 307 aa15.87■□□□□ 0.13
C9orf47-201ENST00000334490 MID2Q9UJV3 735 aa15.87■□□□□ 0.13
C9orf47-201ENST00000334490 STK38LQ9Y2H1 464 aa15.87■□□□□ 0.13
C9orf47-201ENST00000334490 WDR91A4D1P6 747 aa15.87■□□□□ 0.13
C9orf47-201ENST00000334490 APOL1O14791 398 aa15.87■□□□□ 0.13
C9orf47-201ENST00000334490 KLHDC7AQ5VTJ3 777 aa15.87■□□□□ 0.13
C9orf47-201ENST00000334490 CCDC137Q6PK04 289 aaKnown RBP15.87■□□□□ 0.13
C9orf47-201ENST00000334490 RNPC3Q96LT9 517 aaKnown RBP15.87■□□□□ 0.13
C9orf47-201ENST00000334490 ITIH6Q6UXX5 1313 aa15.86■□□□□ 0.13
C9orf47-201ENST00000334490 USP27XA6NNY8 438 aa15.86■□□□□ 0.13
C9orf47-201ENST00000334490 ATP8B1O43520 1251 aa15.86■□□□□ 0.13
C9orf47-201ENST00000334490 CYTH3O43739 400 aa15.86■□□□□ 0.13
C9orf47-201ENST00000334490 STX1BP61266 288 aa15.86■□□□□ 0.13
C9orf47-201ENST00000334490 SLC12A1Q13621 1099 aa15.86■□□□□ 0.13
C9orf47-201ENST00000334490 MOB2Q70IA6 237 aa15.86■□□□□ 0.13
C9orf47-201ENST00000334490 FBXL16Q8N461 479 aa15.86■□□□□ 0.13
C9orf47-201ENST00000334490 AAASQ9NRG9 546 aa15.86■□□□□ 0.13
C9orf47-201ENST00000334490 SUN1O94901 812 aa15.86■□□□□ 0.13
C9orf47-201ENST00000334490 KRT14P02533 472 aa15.86■□□□□ 0.13
C9orf47-201ENST00000334490 NNTQ13423 1086 aa15.86■□□□□ 0.13
C9orf47-201ENST00000334490 ABI2Q9NYB9 513 aaPredicted RBP15.86■□□□□ 0.13
C9orf47-201ENST00000334490 PPP1R12AO14974 1030 aaPredicted RBP15.86■□□□□ 0.13
C9orf47-201ENST00000334490 SOX10P56693 466 aa15.86■□□□□ 0.13
C9orf47-201ENST00000334490 AMHR2Q16671 573 aa15.86■□□□□ 0.13
C9orf47-201ENST00000334490 OR6P1Q8NGX9 317 aa15.86■□□□□ 0.13
C9orf47-201ENST00000334490 SLITRK1Q96PX8 696 aa15.86■□□□□ 0.13
C9orf47-201ENST00000334490 MTMR12Q9C0I1 747 aa15.86■□□□□ 0.13
C9orf47-201ENST00000334490 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.86■□□□□ 0.13
C9orf47-201ENST00000334490 ESYT3A0FGR9 886 aa15.85■□□□□ 0.13
C9orf47-201ENST00000334490 ACADSBP45954 432 aa15.85■□□□□ 0.13
C9orf47-201ENST00000334490 INHBEP58166 350 aa15.85■□□□□ 0.13
C9orf47-201ENST00000334490 PSMC6P62333 389 aa15.85■□□□□ 0.13
C9orf47-201ENST00000334490 CASP8Q14790 479 aa15.85■□□□□ 0.13
C9orf47-201ENST00000334490 SNX17Q15036 470 aa15.85■□□□□ 0.13
C9orf47-201ENST00000334490 PAN2Q504Q3 1202 aaKnown RBP15.85■□□□□ 0.13
C9orf47-201ENST00000334490 GJB7Q6PEY0 223 aa15.85■□□□□ 0.13
C9orf47-201ENST00000334490 TLK2Q86UE8 772 aa15.85■□□□□ 0.13
C9orf47-201ENST00000334490 SEPT8Q92599 483 aa15.85■□□□□ 0.13
C9orf47-201ENST00000334490 RMDN1Q96DB5 314 aa15.85■□□□□ 0.13
C9orf47-201ENST00000334490 XPNPEP3Q9NQH7 507 aa15.85■□□□□ 0.13
C9orf47-201ENST00000334490 IRAK4Q9NWZ3 460 aa15.85■□□□□ 0.13
C9orf47-201ENST00000334490 NAGPAQ9UK23 515 aa15.85■□□□□ 0.13
C9orf47-201ENST00000334490 KRT38O76015 456 aa15.85■□□□□ 0.13
C9orf47-201ENST00000334490 FAM200BP0CF97 657 aa15.85■□□□□ 0.13
C9orf47-201ENST00000334490 ALDH1A3P47895 512 aa15.85■□□□□ 0.13
C9orf47-201ENST00000334490 CASP4P49662 377 aa15.85■□□□□ 0.13
C9orf47-201ENST00000334490 KLK7P49862 253 aa15.85■□□□□ 0.13
C9orf47-201ENST00000334490 DEUP1Q05D60 604 aa15.85■□□□□ 0.13
C9orf47-201ENST00000334490 TTC31Q49AM3 519 aaPredicted RBP15.85■□□□□ 0.13
C9orf47-201ENST00000334490 C6orf118Q5T5N4 469 aa15.85■□□□□ 0.13
C9orf47-201ENST00000334490 MKL1Q969V6 931 aa15.85■□□□□ 0.13
C9orf47-201ENST00000334490 TMEM117Q9H0C3 514 aa15.85■□□□□ 0.13
C9orf47-201ENST00000334490 RIC1Q4ADV7 1423 aa15.85■□□□□ 0.13
C9orf47-201ENST00000334490 RPLP2P05387 115 aaKnown RBP15.85■□□□□ 0.13
C9orf47-201ENST00000334490 BRD2P25440 801 aaKnown RBP15.85■□□□□ 0.13
C9orf47-201ENST00000334490 EIF3EP60228 445 aaKnown RBP15.85■□□□□ 0.13
C9orf47-201ENST00000334490 CAV1Q03135 178 aa15.85■□□□□ 0.13
C9orf47-201ENST00000334490 DCAF6Q58WW2 860 aa15.85■□□□□ 0.13
C9orf47-201ENST00000334490 ALS2CLQ60I27 953 aa15.85■□□□□ 0.13
C9orf47-201ENST00000334490 CATSPERGQ6ZRH7 1159 aa15.85■□□□□ 0.13
C9orf47-201ENST00000334490 ZNF720Q7Z2F6 126 aa15.85■□□□□ 0.13
C9orf47-201ENST00000334490 CD302Q8IX05 232 aa15.85■□□□□ 0.13
C9orf47-201ENST00000334490 STKLD1Q8NE28 680 aa15.85■□□□□ 0.13
C9orf47-201ENST00000334490 CPB2Q96IY4 423 aa15.85■□□□□ 0.13
C9orf47-201ENST00000334490 MTG1Q9BT17 334 aaPredicted RBP15.85■□□□□ 0.13
C9orf47-201ENST00000334490 ATP1A1P05023 1023 aaKnown RBP15.85■□□□□ 0.13
C9orf47-201ENST00000334490 GARTP22102 1010 aa15.85■□□□□ 0.13
C9orf47-201ENST00000334490 PRAMEP78395 509 aa15.85■□□□□ 0.13
C9orf47-201ENST00000334490 ADCY2Q08462 1091 aa15.85■□□□□ 0.13
C9orf47-201ENST00000334490 GRIK4Q16099 956 aa15.85■□□□□ 0.13
C9orf47-201ENST00000334490 GOLGA7BQ2TAP0 167 aa15.85■□□□□ 0.13
C9orf47-201ENST00000334490 EARS2Q5JPH6 523 aaKnown RBP15.85■□□□□ 0.13
C9orf47-201ENST00000334490 HP1BP3Q5SSJ5 553 aaPredicted RBP15.85■□□□□ 0.13
C9orf47-201ENST00000334490 LAMTOR4Q0VGL1 99 aa15.84■□□□□ 0.13
C9orf47-201ENST00000334490 ACVR2BQ13705 512 aa15.84■□□□□ 0.13
C9orf47-201ENST00000334490 SYT17Q9BSW7 474 aa15.84■□□□□ 0.13
C9orf47-201ENST00000334490 NUF2Q9BZD4 464 aa15.84■□□□□ 0.13
C9orf47-201ENST00000334490 IRX2Q9BZI1 471 aaPredicted RBP15.84■□□□□ 0.13
C9orf47-201ENST00000334490 SYNPO2Q9UMS6 1093 aa15.84■□□□□ 0.13
C9orf47-201ENST00000334490 ODC1P11926 461 aa15.84■□□□□ 0.13
C9orf47-201ENST00000334490 CLCN6P51797 869 aa15.84■□□□□ 0.13
C9orf47-201ENST00000334490 DYRK4Q9NR20 520 aa15.84■□□□□ 0.13
C9orf47-201ENST00000334490 FAN1Q9Y2M0 1017 aa15.84■□□□□ 0.13
C9orf47-201ENST00000334490 ADGRB2O60241 1585 aa15.84■□□□□ 0.13
C9orf47-201ENST00000334490 RARRES1P49788 294 aa15.84■□□□□ 0.13
C9orf47-201ENST00000334490 CUL2Q13617 745 aa15.84■□□□□ 0.13
C9orf47-201ENST00000334490 PIGHQ14442 188 aaPredicted RBP15.84■□□□□ 0.13
C9orf47-201ENST00000334490 NAB2Q15742 525 aa15.84■□□□□ 0.13
C9orf47-201ENST00000334490 TRAPPC11Q7Z392 1133 aa15.84■□□□□ 0.13
C9orf47-201ENST00000334490 REPS2Q8NFH8 660 aa15.84■□□□□ 0.13
C9orf47-201ENST00000334490 HPSEQ9Y251 543 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms