RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 KDM6BO15054 1643 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 FAM92AA1XBS5 289 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 F8VZ95 297 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 TPST1O60507 370 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 C21orf59P57076 290 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 GALK2Q01415 458 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 C6orf183Q5T699 404 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 B3GNT6Q6ZMB0 384 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 MYO1HQ8N1T3 1032 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 POP5Q969H6 163 aaKnown RBP6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 TBC1D14Q9P2M4 693 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 TRPC4Q9UBN4 977 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 RPRD2Q5VT52 1461 aaKnown RBP6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 MBD4O95243 580 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 ENO2P09104 434 aaPredicted RBP6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 BCRP11274 1271 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 DSG1Q02413 1049 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 SPOCK1Q08629 439 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 MAPK6Q16659 721 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 WASHC2DQ5SRD0 308 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 RBM46Q8TBY0 533 aaKnown RBP6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 LENG1Q96BZ8 264 aaPredicted RBP6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 NUDCD1Q96RS6 583 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 KCNS3Q9BQ31 491 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 SMYD2Q9NRG4 433 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 CEP72Q9P209 647 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 HPCAL4Q9UM19 191 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 N4BP1O75113 896 aaKnown RBP6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 COL19A1Q14993 1142 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 MSANTD2Q6P1R3 559 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 SIRT1Q96EB6 747 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 RIBC2Q9H4K1 309 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 EXOC7Q9UPT5 735 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 ATXN2Q99700 1313 aaKnown RBP6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 SMIM31A0A1B0GVY4 71 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 PSMD11O00231 422 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 SF3B1O75533 1304 aaKnown RBP eCLIP6.36□□□□□ -1.393e-6■■■■■ 75.9
CDC42BPA-201ENST00000334218 WDR81Q562E7 1941 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 FBXO42Q6P3S6 717 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 CORO6Q6QEF8 472 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 PIAS4Q8N2W9 510 aaPredicted RBP6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 TRIM62Q9BVG3 475 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 CHID1Q9BWS9 393 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 INO80BQ9C086 356 aaPredicted RBP6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 C14orf93Q9H972 538 aaKnown RBP6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 ABT1Q9ULW3 272 aaKnown RBP6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 MED16Q9Y2X0 877 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 AKR1B15C9JRZ8 316 aaPredicted RBP6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 PLEKHA8P1O95397 391 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 CLK1P49759 484 aaKnown RBP6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 PTK7Q13308 1070 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 ATP2B3Q16720 1220 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 PCK2Q16822 640 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 C16orf62Q7Z3J2 963 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 CRACR2BQ8N4Y2 399 aaPredicted RBP6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 PANK3Q9H999 370 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 HPF1Q9NWY4 346 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 WWOXQ9NZC7 414 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 PASKQ96RG2 1323 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 ATP6V1G2-DDX39BF2Z307 99 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 ATP6V1G2O95670 118 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 RHAGQ02094 409 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 STAT4Q14765 748 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 HSD17B12Q53GQ0 312 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 ARMC4Q5T2S8 1044 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 SPATA5Q8NB90 893 aa6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 SPRTNQ9H040 489 aaPredicted RBP6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 MTO1Q9Y2Z2 717 aaKnown RBP6.36□□□□□ -1.39
CDC42BPA-201ENST00000334218 PSMD12O00232 456 aaPredicted RBP6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 AASDHQ4L235 1098 aaPredicted RBP6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 TTC27Q6P3X3 843 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 EPM2AIP1Q7L775 607 aaPredicted RBP6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 UBE3BQ7Z3V4 1068 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 PI4K2AQ9BTU6 479 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 DDX18Q9NVP1 670 aaKnown RBP6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 ANAPC2Q9UJX6 822 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.35□□□□□ -1.392e-7■■□□□ 12.9
CDC42BPA-201ENST00000334218 UBN2Q6ZU65 1347 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 PSDA5PKW4 1024 aaPredicted RBP6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 F5H423 210 aaPredicted RBP6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 H7C1Q1 480 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 MEFVO15553 781 aaPredicted RBP6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 SERPIND1P05546 499 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 PPP2R1AP30153 589 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 STX4Q12846 297 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 CBX3Q13185 183 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 MB21D1Q8N884 522 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 OSCP1Q8WVF1 389 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 AKAP7Q9P0M2 348 aaPredicted RBP6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 PCDHA12Q9UN75 941 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 PSTPIP1O43586 416 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 FSBPO95073 299 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 IL10P22301 178 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 MAT2AP31153 395 aaKnown RBP6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 PLCD1P51178 756 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 DYRK1AQ13627 763 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 COG2Q14746 738 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 C1orf189Q5VU69 101 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 CHMP1BQ7LBR1 199 aa6.35□□□□□ -1.39
CDC42BPA-201ENST00000334218 TIGD4Q8IY51 512 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms