RNA–Protein interactions for RNA: ENST00000329563.8

TSPO-201, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 3 BASIC

Gene TSPO, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-201ENST00000329563 SNW1Q13573 536 aaKnown RBP16.09■□□□□ 0.17
TSPO-201ENST00000329563 KARSQ15046 597 aaKnown RBP16.09■□□□□ 0.17
TSPO-201ENST00000329563 XKR4Q5GH76 650 aa16.09■□□□□ 0.17
TSPO-201ENST00000329563 ALKAL1Q6UXT8 129 aa16.09■□□□□ 0.17
TSPO-201ENST00000329563 ELOA2Q8IYF1 753 aaPredicted RBP16.09■□□□□ 0.17
TSPO-201ENST00000329563 GPR65Q8IYL9 337 aa16.09■□□□□ 0.17
TSPO-201ENST00000329563 PDILTQ8N807 584 aa16.09■□□□□ 0.17
TSPO-201ENST00000329563 TMEM161BQ8NDZ6 487 aa16.09■□□□□ 0.17
TSPO-201ENST00000329563 LNX1Q8TBB1 728 aaPredicted RBP16.09■□□□□ 0.17
TSPO-201ENST00000329563 GPT2Q8TD30 523 aa16.09■□□□□ 0.17
TSPO-201ENST00000329563 ZMAT2Q96NC0 199 aaKnown RBP16.09■□□□□ 0.17
TSPO-201ENST00000329563 LRRC27Q9C0I9 530 aa16.09■□□□□ 0.17
TSPO-201ENST00000329563 BLOC1S4Q9NUP1 217 aa16.09■□□□□ 0.17
TSPO-201ENST00000329563 FNIP2Q9P278 1114 aa16.09■□□□□ 0.17
TSPO-201ENST00000329563 IGSF9Q9P2J2 1179 aa16.09■□□□□ 0.17
TSPO-201ENST00000329563 MYH11P35749 1972 aa16.08■□□□□ 0.16
TSPO-201ENST00000329563 SMIM28A0A1B0GU29 152 aa16.08■□□□□ 0.16
TSPO-201ENST00000329563 PAPLNO95428 1278 aa16.08■□□□□ 0.16
TSPO-201ENST00000329563 PDGFBP01127 241 aaPredicted RBP16.08■□□□□ 0.16
TSPO-201ENST00000329563 MAPTP10636 758 aaKnown RBP16.08■□□□□ 0.16
TSPO-201ENST00000329563 PLS3P13797 630 aa16.08■□□□□ 0.16
TSPO-201ENST00000329563 GRM5P41594 1212 aa16.08■□□□□ 0.16
TSPO-201ENST00000329563 CLCN5P51795 746 aa16.08■□□□□ 0.16
TSPO-201ENST00000329563 TDGQ13569 410 aa16.08■□□□□ 0.16
TSPO-201ENST00000329563 ZNF568Q3ZCX4 644 aa16.08■□□□□ 0.16
TSPO-201ENST00000329563 SEZ6Q53EL9 994 aa16.08■□□□□ 0.16
TSPO-201ENST00000329563 FAM171A1Q5VUB5 890 aa16.08■□□□□ 0.16
TSPO-201ENST00000329563 ASTLQ6HA08 431 aaPredicted RBP16.08■□□□□ 0.16
TSPO-201ENST00000329563 TMEM130Q8N3G9 435 aa16.08■□□□□ 0.16
TSPO-201ENST00000329563 SPIRE2Q8WWL2 714 aa16.08■□□□□ 0.16
TSPO-201ENST00000329563 CLSTN3Q9BQT9 956 aa16.08■□□□□ 0.16
TSPO-201ENST00000329563 MRPL4Q9BYD3 311 aaKnown RBP16.08■□□□□ 0.16
TSPO-201ENST00000329563 PANK2Q9BZ23 570 aa16.08■□□□□ 0.16
TSPO-201ENST00000329563 HAPLN2Q9GZV7 340 aa16.08■□□□□ 0.16
TSPO-201ENST00000329563 PLEKHA4Q9H4M7 779 aa16.08■□□□□ 0.16
TSPO-201ENST00000329563 C17orf75Q9HAS0 396 aa16.08■□□□□ 0.16
TSPO-201ENST00000329563 SF3B1O75533 1304 aaKnown RBP eCLIP16.08■□□□□ 0.16
TSPO-201ENST00000329563 DOCK8Q8NF50 2099 aa16.07■□□□□ 0.16
TSPO-201ENST00000329563 SPTBN4Q9H254 2564 aa16.07■□□□□ 0.16
TSPO-201ENST00000329563 CCDC195A0A1B0GUA6 201 aa16.07■□□□□ 0.16
TSPO-201ENST00000329563 PLCG1P19174 1290 aa16.07■□□□□ 0.16
TSPO-201ENST00000329563 AMPD3Q01432 767 aa16.07■□□□□ 0.16
TSPO-201ENST00000329563 UPP1Q16831 310 aa16.07■□□□□ 0.16
TSPO-201ENST00000329563 RSPO2Q6UXX9 243 aaPredicted RBP16.07■□□□□ 0.16
TSPO-201ENST00000329563 KRBA2Q6ZNG9 492 aa16.07■□□□□ 0.16
TSPO-201ENST00000329563 PIK3R5Q8WYR1 880 aa16.07■□□□□ 0.16
TSPO-201ENST00000329563 NXPE3Q969Y0 559 aa16.07■□□□□ 0.16
TSPO-201ENST00000329563 DHX58Q96C10 678 aa16.07■□□□□ 0.16
TSPO-201ENST00000329563 REEP2Q9BRK0 252 aa16.07■□□□□ 0.16
TSPO-201ENST00000329563 ANP32EQ9BTT0 268 aa16.07■□□□□ 0.16
TSPO-201ENST00000329563 TTPALQ9BTX7 342 aa16.07■□□□□ 0.16
TSPO-201ENST00000329563 TIPINQ9BVW5 301 aa16.07■□□□□ 0.16
TSPO-201ENST00000329563 FBXL21Q9UKT6 434 aa16.07■□□□□ 0.16
TSPO-201ENST00000329563 PDCD11Q14690 1871 aaKnown RBP16.07■□□□□ 0.16
TSPO-201ENST00000329563 CLUHO75153 1309 aa16.06■□□□□ 0.16
TSPO-201ENST00000329563 TMEM189-UBE2V1I3L0A0 370 aa16.06■□□□□ 0.16
TSPO-201ENST00000329563 I3L4J1 428 aa16.06■□□□□ 0.16
TSPO-201ENST00000329563 GFRA3O60609 400 aa16.06■□□□□ 0.16
TSPO-201ENST00000329563 MYL1P05976 194 aa16.06■□□□□ 0.16
TSPO-201ENST00000329563 MCF2P10911 925 aa16.06■□□□□ 0.16
TSPO-201ENST00000329563 FGFR3P22607 806 aa16.06■□□□□ 0.16
TSPO-201ENST00000329563 GBP2P32456 591 aaPredicted RBP16.06■□□□□ 0.16
TSPO-201ENST00000329563 BRCC3P46736 316 aa16.06■□□□□ 0.16
TSPO-201ENST00000329563 NCKAP1LP55160 1127 aa16.06■□□□□ 0.16
TSPO-201ENST00000329563 E2F4Q16254 413 aa16.06■□□□□ 0.16
TSPO-201ENST00000329563 MPZL3Q6UWV2 235 aa16.06■□□□□ 0.16
TSPO-201ENST00000329563 APBB1IPQ7Z5R6 666 aaPredicted RBP16.06■□□□□ 0.16
TSPO-201ENST00000329563 CEP57Q86XR8 500 aa16.06■□□□□ 0.16
TSPO-201ENST00000329563 SNX27Q96L92 541 aa16.06■□□□□ 0.16
TSPO-201ENST00000329563 PHOX2BQ99453 314 aa16.06■□□□□ 0.16
TSPO-201ENST00000329563 PIDD1Q9HB75 910 aa16.06■□□□□ 0.16
TSPO-201ENST00000329563 WDR6Q9NNW5 1121 aaKnown RBP16.06■□□□□ 0.16
TSPO-201ENST00000329563 ZDHHC7Q9NXF8 308 aa16.06■□□□□ 0.16
TSPO-201ENST00000329563 DUSP12Q9UNI6 340 aa16.06■□□□□ 0.16
TSPO-201ENST00000329563 A0A087X0B3 334 aa16.05■□□□□ 0.16
TSPO-201ENST00000329563 H0Y858 1186 aa16.05■□□□□ 0.16
TSPO-201ENST00000329563 LETM1O95202 739 aaPredicted RBP16.05■□□□□ 0.16
TSPO-201ENST00000329563 HARSP12081 509 aaKnown RBP16.05■□□□□ 0.16
TSPO-201ENST00000329563 RFX1P22670 979 aa16.05■□□□□ 0.16
TSPO-201ENST00000329563 DHX8Q14562 1220 aaKnown RBP16.05■□□□□ 0.16
TSPO-201ENST00000329563 MCM6Q14566 821 aa16.05■□□□□ 0.16
TSPO-201ENST00000329563 PSMD5Q16401 504 aa16.05■□□□□ 0.16
TSPO-201ENST00000329563 CCDC183Q5T5S1 534 aa16.05■□□□□ 0.16
TSPO-201ENST00000329563 PDXDC1Q6P996 788 aa16.05■□□□□ 0.16
TSPO-201ENST00000329563 SV2BQ7L1I2 683 aa16.05■□□□□ 0.16
TSPO-201ENST00000329563 FLCNQ8NFG4 579 aa16.05■□□□□ 0.16
TSPO-201ENST00000329563 SMG7Q92540 1137 aaKnown RBP16.05■□□□□ 0.16
TSPO-201ENST00000329563 LARP4BQ92615 738 aaKnown RBP16.05■□□□□ 0.16
TSPO-201ENST00000329563 C18orf25Q96B23 403 aaPredicted RBP16.05■□□□□ 0.16
TSPO-201ENST00000329563 FIZ1Q96SL8 496 aa16.05■□□□□ 0.16
TSPO-201ENST00000329563 RTP3Q9BQQ7 232 aa16.05■□□□□ 0.16
TSPO-201ENST00000329563 CCDC94Q9BW85 323 aaPredicted RBP16.05■□□□□ 0.16
TSPO-201ENST00000329563 NUP62CLQ9H1M0 184 aa16.05■□□□□ 0.16
TSPO-201ENST00000329563 TNMDQ9H2S6 317 aa16.05■□□□□ 0.16
TSPO-201ENST00000329563 KCNK12Q9HB15 430 aa16.05■□□□□ 0.16
TSPO-201ENST00000329563 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.05■□□□□ 0.16
TSPO-201ENST00000329563 KCND2Q9NZV8 630 aa16.05■□□□□ 0.16
TSPO-201ENST00000329563 CNTN3Q9P232 1028 aa16.05■□□□□ 0.16
TSPO-201ENST00000329563 SERTAD1Q9UHV2 236 aa16.05■□□□□ 0.16
TSPO-201ENST00000329563 FBXW11Q9UKB1 542 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms