RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 SLC17A8Q8NDX2 589 aa14.97□□□□□ -0.01
ATP2C1-201ENST00000328560 TMC2Q8TDI7 906 aa14.97□□□□□ -0.01
ATP2C1-201ENST00000328560 ATXN2LQ8WWM7 1075 aaKnown RBP14.97□□□□□ -0.01
ATP2C1-201ENST00000328560 MRRFQ96E11 262 aaKnown RBP14.97□□□□□ -0.01
ATP2C1-201ENST00000328560 C9orf72Q96LT7 481 aa14.97□□□□□ -0.01
ATP2C1-201ENST00000328560 DEFB129Q9H1M3 183 aa14.97□□□□□ -0.01
ATP2C1-201ENST00000328560 AS3MTQ9HBK9 375 aa14.97□□□□□ -0.01
ATP2C1-201ENST00000328560 CNOT7Q9UIV1 285 aaKnown RBP14.97□□□□□ -0.01
ATP2C1-201ENST00000328560 POLGP54098 1239 aaPredicted RBP14.97□□□□□ -0.01
ATP2C1-201ENST00000328560 NLRP11P59045 1033 aaKnown RBP14.97□□□□□ -0.01
ATP2C1-201ENST00000328560 SNRPFP62306 86 aaKnown RBP14.97□□□□□ -0.01
ATP2C1-201ENST00000328560 CYP1B1Q16678 543 aa14.97□□□□□ -0.01
ATP2C1-201ENST00000328560 CAPN12Q6ZSI9 719 aa14.97□□□□□ -0.01
ATP2C1-201ENST00000328560 ARMC9Q7Z3E5 817 aa14.97□□□□□ -0.01
ATP2C1-201ENST00000328560 EXOC3L1Q86VI1 746 aa14.97□□□□□ -0.01
ATP2C1-201ENST00000328560 MTMR14Q8NCE2 650 aa14.97□□□□□ -0.01
ATP2C1-201ENST00000328560 ZKSCAN4Q969J2 545 aaPredicted RBP14.97□□□□□ -0.01
ATP2C1-201ENST00000328560 LRRC19Q9H756 370 aa14.97□□□□□ -0.01
ATP2C1-201ENST00000328560 ADAM22Q9P0K1 906 aa14.97□□□□□ -0.01
ATP2C1-201ENST00000328560 MROH7Q68CQ1 1323 aa14.97□□□□□ -0.01
ATP2C1-201ENST00000328560 VWA5AO00534 786 aa14.97□□□□□ -0.01
ATP2C1-201ENST00000328560 FSCN2O14926 492 aa14.97□□□□□ -0.01
ATP2C1-201ENST00000328560 STRN3Q13033 797 aa14.97□□□□□ -0.01
ATP2C1-201ENST00000328560 SUGP1Q8IWZ8 645 aaKnown RBP14.97□□□□□ -0.01
ATP2C1-201ENST00000328560 ZNF317Q96PQ6 595 aaPredicted RBP14.97□□□□□ -0.01
ATP2C1-201ENST00000328560 PAIP2Q9BPZ3 127 aaKnown RBP14.97□□□□□ -0.01
ATP2C1-201ENST00000328560 ACTR5Q9H9F9 607 aaPredicted RBP14.97□□□□□ -0.01
ATP2C1-201ENST00000328560 XPNPEP1Q9NQW7 623 aa14.97□□□□□ -0.01
ATP2C1-201ENST00000328560 GGA2Q9UJY4 613 aa14.97□□□□□ -0.01
ATP2C1-201ENST00000328560 UTRNP46939 3433 aa14.97□□□□□ -0.01
ATP2C1-201ENST00000328560 TMEM120BA0PK00 339 aa14.96□□□□□ -0.01
ATP2C1-201ENST00000328560 C5orf60A6NFR6 353 aa14.96□□□□□ -0.01
ATP2C1-201ENST00000328560 DKC1O60832 514 aaKnown RBP eCLIP14.96□□□□□ -0.01
ATP2C1-201ENST00000328560 ZBTB7AO95365 584 aa14.96□□□□□ -0.01
ATP2C1-201ENST00000328560 C3orf20Q8ND61 904 aa14.96□□□□□ -0.01
ATP2C1-201ENST00000328560 SNF8Q96H20 258 aa14.96□□□□□ -0.01
ATP2C1-201ENST00000328560 PCDHB2Q9Y5E7 798 aa14.96□□□□□ -0.01
ATP2C1-201ENST00000328560 PSAPP07602 524 aa14.96□□□□□ -0.01
ATP2C1-201ENST00000328560 RDXP35241 583 aaKnown RBP14.96□□□□□ -0.01
ATP2C1-201ENST00000328560 TCEAL1Q15170 157 aa14.96□□□□□ -0.01
ATP2C1-201ENST00000328560 ZNF394Q53GI3 561 aa14.96□□□□□ -0.01
ATP2C1-201ENST00000328560 ZBTB41Q5SVQ8 909 aa14.96□□□□□ -0.01
ATP2C1-201ENST00000328560 VSIG10LQ86VR7 867 aa14.96□□□□□ -0.01
ATP2C1-201ENST00000328560 MICALL2Q8IY33 904 aa14.96□□□□□ -0.01
ATP2C1-201ENST00000328560 ATP6V0A4Q9HBG4 840 aa14.96□□□□□ -0.01
ATP2C1-201ENST00000328560 JPH1Q9HDC5 661 aaPredicted RBP14.96□□□□□ -0.01
ATP2C1-201ENST00000328560 AAASQ9NRG9 546 aa14.96□□□□□ -0.01
ATP2C1-201ENST00000328560 HOMER3Q9NSC5 361 aa14.96□□□□□ -0.01
ATP2C1-201ENST00000328560 CCT8L1PA6NM43 557 aa14.96□□□□□ -0.02
ATP2C1-201ENST00000328560 TCP11X1B4DZS4 312 aa14.96□□□□□ -0.02
ATP2C1-201ENST00000328560 ATF7P17544 494 aaPredicted RBP14.96□□□□□ -0.02
ATP2C1-201ENST00000328560 HMGCS2P54868 508 aa14.96□□□□□ -0.02
ATP2C1-201ENST00000328560 ATP13A4Q4VNC1 1196 aa14.96□□□□□ -0.02
ATP2C1-201ENST00000328560 ADAM33Q9BZ11 813 aa14.96□□□□□ -0.02
ATP2C1-201ENST00000328560 CYP26B1Q9NR63 512 aa14.96□□□□□ -0.02
ATP2C1-201ENST00000328560 FGFR1OP2Q9NVK5 253 aa14.96□□□□□ -0.02
ATP2C1-201ENST00000328560 AGO2Q9UKV8 859 aaKnown RBP14.96□□□□□ -0.02
ATP2C1-201ENST00000328560 DGAT1O75907 488 aa14.95□□□□□ -0.02
ATP2C1-201ENST00000328560 TAS2R40P59535 323 aa14.95□□□□□ -0.02
ATP2C1-201ENST00000328560 ACTR2P61160 394 aa14.95□□□□□ -0.02
ATP2C1-201ENST00000328560 PRKG1Q13976 671 aa14.95□□□□□ -0.02
ATP2C1-201ENST00000328560 CNGA2Q16280 664 aa14.95□□□□□ -0.02
ATP2C1-201ENST00000328560 NBPF12Q5TAG4 269 aaPredicted RBP14.95□□□□□ -0.02
ATP2C1-201ENST00000328560 LIN9Q5TKA1 542 aa14.95□□□□□ -0.02
ATP2C1-201ENST00000328560 TDRD10Q5VZ19 366 aaKnown RBP14.95□□□□□ -0.02
ATP2C1-201ENST00000328560 MCPH1Q8NEM0 835 aa14.95□□□□□ -0.02
ATP2C1-201ENST00000328560 ACSF2Q96CM8 615 aaPredicted RBP14.95□□□□□ -0.02
ATP2C1-201ENST00000328560 HAUS1Q96CS2 278 aa14.95□□□□□ -0.02
ATP2C1-201ENST00000328560 WRNIP1Q96S55 665 aa14.95□□□□□ -0.02
ATP2C1-201ENST00000328560 TARS2Q9BW92 718 aaKnown RBP14.95□□□□□ -0.02
ATP2C1-201ENST00000328560 MAP3K20Q9NYL2 800 aaKnown RBP14.95□□□□□ -0.02
ATP2C1-201ENST00000328560 KRT10P13645 584 aa14.95□□□□□ -0.02
ATP2C1-201ENST00000328560 NUGGCQ68CJ6 796 aa14.95□□□□□ -0.02
ATP2C1-201ENST00000328560 HIBCHQ6NVY1 386 aaPredicted RBP14.95□□□□□ -0.02
ATP2C1-201ENST00000328560 TRMT10CQ7L0Y3 403 aaKnown RBP14.95□□□□□ -0.02
ATP2C1-201ENST00000328560 TAS1R3Q7RTX0 852 aa14.95□□□□□ -0.02
ATP2C1-201ENST00000328560 CROCCP2Q86T23 111 aa14.95□□□□□ -0.02
ATP2C1-201ENST00000328560 DEPTORQ8TB45 409 aa14.95□□□□□ -0.02
ATP2C1-201ENST00000328560 CENPTQ96BT3 561 aa14.95□□□□□ -0.02
ATP2C1-201ENST00000328560 TCHPQ9BT92 498 aa14.95□□□□□ -0.02
ATP2C1-201ENST00000328560 DCLK3Q9C098 648 aa14.95□□□□□ -0.02
ATP2C1-201ENST00000328560 SLC9A2Q9UBY0 812 aa14.95□□□□□ -0.02
ATP2C1-201ENST00000328560 MYPNQ86TC9 1320 aa14.95□□□□□ -0.02
ATP2C1-201ENST00000328560 PMM2O15305 246 aa14.94□□□□□ -0.02
ATP2C1-201ENST00000328560 FDX1P10109 184 aa14.94□□□□□ -0.02
ATP2C1-201ENST00000328560 UNGP13051 313 aaPredicted RBP14.94□□□□□ -0.02
ATP2C1-201ENST00000328560 ITIH2P19823 946 aa14.94□□□□□ -0.02
ATP2C1-201ENST00000328560 GNA15P30679 374 aa14.94□□□□□ -0.02
ATP2C1-201ENST00000328560 DSG3P32926 999 aa14.94□□□□□ -0.02
ATP2C1-201ENST00000328560 GCNT1Q02742 428 aa14.94□□□□□ -0.02
ATP2C1-201ENST00000328560 PNMA8AQ86V59 439 aaPredicted RBP14.94□□□□□ -0.02
ATP2C1-201ENST00000328560 SRRM1Q8IYB3 904 aaKnown RBP14.94□□□□□ -0.02
ATP2C1-201ENST00000328560 SLC16A10Q8TF71 515 aa14.94□□□□□ -0.02
ATP2C1-201ENST00000328560 SPIRE2Q8WWL2 714 aa14.94□□□□□ -0.02
ATP2C1-201ENST00000328560 CCT6BQ92526 530 aa14.94□□□□□ -0.02
ATP2C1-201ENST00000328560 RBAKQ9NYW8 714 aaPredicted RBP14.94□□□□□ -0.02
ATP2C1-201ENST00000328560 PTPRJQ12913 1337 aa14.94□□□□□ -0.02
ATP2C1-201ENST00000328560 K7ERI5 159 aa14.94□□□□□ -0.02
ATP2C1-201ENST00000328560 TLR3O15455 904 aaKnown RBP14.94□□□□□ -0.02
ATP2C1-201ENST00000328560 POTEJP0CG39 1038 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms