RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 RSAD1Q9HA92 442 aa11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 UBQLN1Q9UMX0 589 aaKnown RBP11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 FHOD1Q9Y613 1164 aa11.05□□□□□ -0.64
VIPAS39-201ENST00000327028 SMIM28A0A1B0GU29 152 aa11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 MEIS3P2A8K0S8 358 aa11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 INPPL1O15357 1258 aa11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 XPOTO43592 962 aaKnown RBP11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 LRRN2O75325 713 aa11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 EOMESO95936 686 aa11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 CYP3A5P20815 502 aa11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 KRT9P35527 623 aa11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 MLH1P40692 756 aa11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 ADKP55263 362 aaKnown RBP11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 TRPC3Q13507 836 aa11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 CNKSR3Q6P9H4 555 aa11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 GJB7Q6PEY0 223 aa11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 ARHGEF19Q8IW93 802 aa11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 BEST2Q8NFU1 509 aa11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 CXorf38Q8TB03 319 aa11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 ABHD10Q9NUJ1 306 aa11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 DPP3Q9NY33 737 aa11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 SIX4Q9UIU6 781 aa11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 PTGESO14684 152 aa11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 RAG1P15918 1043 aa11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 LRMPQ12912 555 aa11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 WDR44Q5JSH3 913 aa11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 GLRA4Q5JXX5 417 aa11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 PHLDB3Q6NSJ2 640 aa11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 PDXDC1Q6P996 788 aa11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 DEFB128Q7Z7B8 93 aa11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 TAF4BQ92750 862 aa11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 FAM81BQ96LP2 452 aa11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 ZFP42Q96MM3 310 aa11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 PPP1R10Q96QC0 940 aaKnown RBP11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 RPS6KC1Q96S38 1066 aa11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 IMPG2Q9BZV3 1241 aa11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 ELAC1Q9H777 363 aaKnown RBP11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 NLRC4Q9NPP4 1024 aa11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 TUBGCP4Q9UGJ1 667 aa11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 AJAP1Q9UKB5 411 aaPredicted RBP11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 MYO6Q9UM54 1294 aa11.04□□□□□ -0.64
VIPAS39-201ENST00000327028 ARL5CA6NH57 179 aa11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 ENPP3O14638 875 aa11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 ASS1P00966 412 aaKnown RBP11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 ITGB3P05106 788 aa11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 ITGB8P26012 769 aa11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 GUCY2FP51841 1108 aa11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 JAM2P57087 298 aa11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 HS1BP3Q53T59 392 aa11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 MFSD5Q6N075 450 aa11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 LRRC8AQ8IWT6 810 aa11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 RNF169Q8NCN4 708 aa11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 OR8K1Q8NGG5 319 aa11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 VWCEQ96DN2 955 aa11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 GAD1Q99259 594 aa11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 PI4K2AQ9BTU6 479 aa11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 NUCKS1Q9H1E3 243 aaKnown RBP11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 SLC38A7Q9NVC3 462 aa11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 TMEM161AQ9NX61 479 aa11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 DNAJC12Q9UKB3 198 aa11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 STAU1O95793 577 aaKnown RBP11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 CST3P01034 146 aaPredicted RBP11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 FECHP22830 423 aa11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 POLR2BP30876 1174 aaKnown RBP11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 ATICP31939 592 aa11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 MYL6P60660 151 aa11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 NOP14P78316 857 aaKnown RBP11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 RBP5P82980 135 aa11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 GCNT1Q02742 428 aa11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 SGSM1Q2NKQ1 1148 aa11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 ZNF699Q32M78 642 aa11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 RRAGAQ7L523 313 aa11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 TMEM199Q8N511 208 aa11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 GSTCDQ8NEC7 633 aa11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 CCDC112Q8NEF3 446 aa11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 HELQQ8TDG4 1101 aa11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 C18orf25Q96B23 403 aaPredicted RBP11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 STK33Q9BYT3 514 aa11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 XYLT2Q9H1B5 865 aa11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 APOBEC3GQ9HC16 384 aaKnown RBP11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 UBE2TQ9NPD8 197 aaPredicted RBP11.03□□□□□ -0.64
VIPAS39-201ENST00000327028 TDRD15B5MCY1 1934 aaKnown RBP11.02□□□□□ -0.64
VIPAS39-201ENST00000327028 LRRC53A6NM62 1247 aa11.02□□□□□ -0.65
VIPAS39-201ENST00000327028 PFKMP08237 780 aa11.02□□□□□ -0.65
VIPAS39-201ENST00000327028 KRT19P08727 400 aa11.02□□□□□ -0.65
VIPAS39-201ENST00000327028 RAPGEF1Q13905 1077 aa11.02□□□□□ -0.65
VIPAS39-201ENST00000327028 SCARA3Q6AZY7 606 aa11.02□□□□□ -0.65
VIPAS39-201ENST00000327028 ENOSF1Q7L5Y1 443 aa11.02□□□□□ -0.65
VIPAS39-201ENST00000327028 PPM1KQ8N3J5 372 aa11.02□□□□□ -0.65
VIPAS39-201ENST00000327028 SYN2Q92777 582 aaPredicted RBP11.02□□□□□ -0.65
VIPAS39-201ENST00000327028 TRIM44Q96DX7 344 aaPredicted RBP11.02□□□□□ -0.65
VIPAS39-201ENST00000327028 SPAG5Q96R06 1193 aa11.02□□□□□ -0.65
VIPAS39-201ENST00000327028 KCNF1Q9H3M0 494 aa11.02□□□□□ -0.65
VIPAS39-201ENST00000327028 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.02□□□□□ -0.65
VIPAS39-201ENST00000327028 RNF216Q9NWF9 866 aaPredicted RBP11.02□□□□□ -0.65
VIPAS39-201ENST00000327028 TTC3P53804 2025 aa11.02□□□□□ -0.65
VIPAS39-201ENST00000327028 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.02□□□□□ -0.65
VIPAS39-201ENST00000327028 IBSPP21815 317 aaPredicted RBP11.02□□□□□ -0.65
VIPAS39-201ENST00000327028 TBXAS1P24557 533 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms