RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 YIPF3Q9GZM5 350 aa15.59■□□□□ 0.09
TCOF1-201ENST00000323668 ALG13Q9NP73 1137 aaKnown RBP15.59■□□□□ 0.09
TCOF1-201ENST00000323668 ZNF302Q9NR11 478 aa15.59■□□□□ 0.09
TCOF1-201ENST00000323668 HEY1Q9Y5J3 304 aa15.59■□□□□ 0.09
TCOF1-201ENST00000323668 EML1O00423 815 aa15.59■□□□□ 0.09
TCOF1-201ENST00000323668 RIPK2O43353 540 aa15.59■□□□□ 0.09
TCOF1-201ENST00000323668 MARSP56192 900 aaKnown RBP15.59■□□□□ 0.09
TCOF1-201ENST00000323668 CCNYQ8ND76 341 aa15.59■□□□□ 0.09
TCOF1-201ENST00000323668 ACER1Q8TDN7 264 aa15.59■□□□□ 0.09
TCOF1-201ENST00000323668 AGBL1Q96MI9 1066 aa15.59■□□□□ 0.09
TCOF1-201ENST00000323668 FBXO28Q9NVF7 368 aa15.59■□□□□ 0.09
TCOF1-201ENST00000323668 UBOX5O94941 541 aa15.59■□□□□ 0.09
TCOF1-201ENST00000323668 TTC4O95801 387 aa15.59■□□□□ 0.09
TCOF1-201ENST00000323668 ARL4AP40617 200 aa15.59■□□□□ 0.09
TCOF1-201ENST00000323668 ECM1Q16610 540 aa15.59■□□□□ 0.09
TCOF1-201ENST00000323668 PPP6R3Q5H9R7 873 aaPredicted RBP15.59■□□□□ 0.09
TCOF1-201ENST00000323668 OTOP1Q7RTM1 612 aa15.59■□□□□ 0.09
TCOF1-201ENST00000323668 CCDC125Q86Z20 511 aa15.59■□□□□ 0.09
TCOF1-201ENST00000323668 C7orf31Q8N865 590 aa15.59■□□□□ 0.09
TCOF1-201ENST00000323668 GMCL1P1Q8NEA9 526 aa15.59■□□□□ 0.09
TCOF1-201ENST00000323668 GPRC5CQ9NQ84 441 aa15.59■□□□□ 0.09
TCOF1-201ENST00000323668 PYGMP11217 842 aa15.58■□□□□ 0.09
TCOF1-201ENST00000323668 ECE1P42892 770 aa15.58■□□□□ 0.09
TCOF1-201ENST00000323668 POLE2P56282 527 aa15.58■□□□□ 0.09
TCOF1-201ENST00000323668 SLC47A2Q86VL8 602 aa15.58■□□□□ 0.09
TCOF1-201ENST00000323668 ALKBH8Q96BT7 664 aaKnown RBP15.58■□□□□ 0.09
TCOF1-201ENST00000323668 JPH1Q9HDC5 661 aaPredicted RBP15.58■□□□□ 0.09
TCOF1-201ENST00000323668 NPHS2Q9NP85 383 aa15.58■□□□□ 0.09
TCOF1-201ENST00000323668 EIF4E1BA6NMX2 242 aaKnown RBP15.58■□□□□ 0.08
TCOF1-201ENST00000323668 KRT3P12035 628 aa15.58■□□□□ 0.08
TCOF1-201ENST00000323668 AP3M2P53677 418 aa15.58■□□□□ 0.08
TCOF1-201ENST00000323668 CBWD6Q4V339 395 aa15.58■□□□□ 0.08
TCOF1-201ENST00000323668 XKR3Q5GH77 459 aa15.58■□□□□ 0.08
TCOF1-201ENST00000323668 CBWD3Q5JTY5 395 aa15.58■□□□□ 0.08
TCOF1-201ENST00000323668 CBWD5Q5RIA9 395 aa15.58■□□□□ 0.08
TCOF1-201ENST00000323668 FUKQ8N0W3 1084 aa15.58■□□□□ 0.08
TCOF1-201ENST00000323668 DEPDC1BQ8WUY9 529 aa15.58■□□□□ 0.08
TCOF1-201ENST00000323668 FAM151AQ8WW52 585 aa15.58■□□□□ 0.08
TCOF1-201ENST00000323668 GJD4Q96KN9 370 aaPredicted RBP15.58■□□□□ 0.08
TCOF1-201ENST00000323668 KIFC3Q9BVG8 833 aa15.58■□□□□ 0.08
TCOF1-201ENST00000323668 CYP26B1Q9NR63 512 aa15.58■□□□□ 0.08
TCOF1-201ENST00000323668 SYNJ2BP-COX16A0A087WUM0 186 aa15.58■□□□□ 0.08
TCOF1-201ENST00000323668 GYS1P13807 737 aa15.58■□□□□ 0.08
TCOF1-201ENST00000323668 SAT1P21673 171 aa15.58■□□□□ 0.08
TCOF1-201ENST00000323668 MARK3P27448 753 aa15.58■□□□□ 0.08
TCOF1-201ENST00000323668 ASPHQ12797 758 aa15.58■□□□□ 0.08
TCOF1-201ENST00000323668 CIAPIN1Q6FI81 312 aa15.58■□□□□ 0.08
TCOF1-201ENST00000323668 TATDN2Q93075 761 aa15.58■□□□□ 0.08
TCOF1-201ENST00000323668 COX16Q9P0S2 106 aa15.58■□□□□ 0.08
TCOF1-201ENST00000323668 GAKO14976 1311 aa15.58■□□□□ 0.08
TCOF1-201ENST00000323668 NCOA4Q13772 614 aa15.57■□□□□ 0.08
TCOF1-201ENST00000323668 SCYL1Q96KG9 808 aa15.57■□□□□ 0.08
TCOF1-201ENST00000323668 ADAMTS3O15072 1205 aa15.57■□□□□ 0.08
TCOF1-201ENST00000323668 BAATQ14032 418 aaPredicted RBP15.57■□□□□ 0.08
TCOF1-201ENST00000323668 FEZF2Q8TBJ5 459 aa15.57■□□□□ 0.08
TCOF1-201ENST00000323668 PSPC1Q8WXF1 523 aaKnown RBP15.57■□□□□ 0.08
TCOF1-201ENST00000323668 SUFUQ9UMX1 484 aa15.57■□□□□ 0.08
TCOF1-201ENST00000323668 WDR46O15213 610 aaKnown RBP15.57■□□□□ 0.08
TCOF1-201ENST00000323668 ECM2O94769 699 aaPredicted RBP15.57■□□□□ 0.08
TCOF1-201ENST00000323668 NOL4O94818 638 aa15.57■□□□□ 0.08
TCOF1-201ENST00000323668 RRM1P23921 792 aa15.57■□□□□ 0.08
TCOF1-201ENST00000323668 NFX1Q12986 1120 aaKnown RBP15.57■□□□□ 0.08
TCOF1-201ENST00000323668 PIGHQ14442 188 aaPredicted RBP15.57■□□□□ 0.08
TCOF1-201ENST00000323668 LONP2Q86WA8 852 aa15.57■□□□□ 0.08
TCOF1-201ENST00000323668 TAS1R2Q8TE23 839 aa15.57■□□□□ 0.08
TCOF1-201ENST00000323668 LPAR1Q92633 364 aa15.57■□□□□ 0.08
TCOF1-201ENST00000323668 OSBPL1AQ9BXW6 950 aa15.57■□□□□ 0.08
TCOF1-201ENST00000323668 GEMIN8Q9NWZ8 242 aaKnown RBP15.57■□□□□ 0.08
TCOF1-201ENST00000323668 NR3C2P08235 984 aa15.57■□□□□ 0.08
TCOF1-201ENST00000323668 RARAP10276 462 aa15.57■□□□□ 0.08
TCOF1-201ENST00000323668 GPC3P51654 580 aa15.57■□□□□ 0.08
TCOF1-201ENST00000323668 EIF3EP60228 445 aaKnown RBP15.57■□□□□ 0.08
TCOF1-201ENST00000323668 MCEEQ96PE7 176 aa15.57■□□□□ 0.08
TCOF1-201ENST00000323668 AKT3Q9Y243 479 aa15.57■□□□□ 0.08
TCOF1-201ENST00000323668 CYP3A7-CYP3A51PA0A087WV96 503 aa15.56■□□□□ 0.08
TCOF1-201ENST00000323668 PPFIA2O75334 1257 aa15.56■□□□□ 0.08
TCOF1-201ENST00000323668 CYP3A7P24462 503 aa15.56■□□□□ 0.08
TCOF1-201ENST00000323668 C2CD6Q53TS8 623 aa15.56■□□□□ 0.08
TCOF1-201ENST00000323668 GADL1Q6ZQY3 521 aa15.56■□□□□ 0.08
TCOF1-201ENST00000323668 C15orf52Q6ZUT6 534 aaKnown RBP15.56■□□□□ 0.08
TCOF1-201ENST00000323668 NUDCD3Q8IVD9 361 aa15.56■□□□□ 0.08
TCOF1-201ENST00000323668 ARMC2Q8NEN0 867 aa15.56■□□□□ 0.08
TCOF1-201ENST00000323668 HES6Q96HZ4 224 aa15.56■□□□□ 0.08
TCOF1-201ENST00000323668 FAM161BQ96MY7 647 aa15.56■□□□□ 0.08
TCOF1-201ENST00000323668 MRPL4Q9BYD3 311 aaKnown RBP15.56■□□□□ 0.08
TCOF1-201ENST00000323668 UBN1Q9NPG3 1134 aa15.56■□□□□ 0.08
TCOF1-201ENST00000323668 O00370 1275 aa15.56■□□□□ 0.08
TCOF1-201ENST00000323668 NCF2P19878 526 aaPredicted RBP15.56■□□□□ 0.08
TCOF1-201ENST00000323668 BCAR1P56945 870 aa15.56■□□□□ 0.08
TCOF1-201ENST00000323668 ROR1Q01973 937 aa15.56■□□□□ 0.08
TCOF1-201ENST00000323668 KCTD2Q14681 263 aa15.56■□□□□ 0.08
TCOF1-201ENST00000323668 ZNF568Q3ZCX4 644 aa15.56■□□□□ 0.08
TCOF1-201ENST00000323668 HYIQ5T013 277 aa15.56■□□□□ 0.08
TCOF1-201ENST00000323668 C3orf62Q6ZUJ4 267 aa15.56■□□□□ 0.08
TCOF1-201ENST00000323668 DNAAF3Q8N9W5 541 aa15.56■□□□□ 0.08
TCOF1-201ENST00000323668 KRT35Q92764 455 aa15.56■□□□□ 0.08
TCOF1-201ENST00000323668 C17orf75Q9HAS0 396 aa15.56■□□□□ 0.08
TCOF1-201ENST00000323668 ZBTB39O15060 712 aa15.56■□□□□ 0.08
TCOF1-201ENST00000323668 CCDC22O60826 627 aa15.56■□□□□ 0.08
TCOF1-201ENST00000323668 NOP14P78316 857 aaKnown RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms