RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 OTOP1Q7RTM1 612 aa16.16■□□□□ 0.18
VARS2-201ENST00000321897 PRUNE1Q86TP1 453 aa16.16■□□□□ 0.18
VARS2-201ENST00000321897 NAF1Q96HR8 494 aaKnown RBP16.16■□□□□ 0.18
VARS2-201ENST00000321897 SH3GL2Q99962 352 aa16.16■□□□□ 0.18
VARS2-201ENST00000321897 WDR18Q9BV38 432 aa16.16■□□□□ 0.18
VARS2-201ENST00000321897 PAPOLBQ9NRJ5 636 aaKnown RBP16.16■□□□□ 0.18
VARS2-201ENST00000321897 PPARGC1AQ9UBK2 798 aaKnown RBP16.16■□□□□ 0.18
VARS2-201ENST00000321897 FAF1Q9UNN5 650 aaPredicted RBP16.16■□□□□ 0.18
VARS2-201ENST00000321897 MIF4GDA9UHW6 222 aaKnown RBP16.16■□□□□ 0.18
VARS2-201ENST00000321897 FGRP09769 529 aa16.16■□□□□ 0.18
VARS2-201ENST00000321897 TKFCQ3LXA3 575 aa16.16■□□□□ 0.18
VARS2-201ENST00000321897 DACT2Q5SW24 774 aa16.16■□□□□ 0.18
VARS2-201ENST00000321897 MEI1Q5TIA1 1274 aa16.16■□□□□ 0.18
VARS2-201ENST00000321897 NPHS2Q9NP85 383 aa16.16■□□□□ 0.18
VARS2-201ENST00000321897 ZNF302Q9NR11 478 aa16.16■□□□□ 0.18
VARS2-201ENST00000321897 SLC9A2Q9UBY0 812 aa16.16■□□□□ 0.18
VARS2-201ENST00000321897 ZNRF3Q9ULT6 936 aa16.16■□□□□ 0.18
VARS2-201ENST00000321897 TBX3O15119 743 aa16.15■□□□□ 0.18
VARS2-201ENST00000321897 ENTPD3O75355 529 aa16.15■□□□□ 0.18
VARS2-201ENST00000321897 STAMBPO95630 424 aa16.15■□□□□ 0.18
VARS2-201ENST00000321897 SPARCL1Q14515 664 aa16.15■□□□□ 0.18
VARS2-201ENST00000321897 MAIP1Q8WWC4 291 aa16.15■□□□□ 0.18
VARS2-201ENST00000321897 ERP44Q9BS26 406 aa16.15■□□□□ 0.18
VARS2-201ENST00000321897 OSBPL7Q9BZF2 842 aa16.15■□□□□ 0.18
VARS2-201ENST00000321897 FAM129AQ9BZQ8 928 aa16.15■□□□□ 0.18
VARS2-201ENST00000321897 MRPL47Q9HD33 250 aaKnown RBP16.15■□□□□ 0.18
VARS2-201ENST00000321897 ZFATQ9P243 1243 aa16.15■□□□□ 0.18
VARS2-201ENST00000321897 CREB3O43889 395 aa16.15■□□□□ 0.18
VARS2-201ENST00000321897 RRM1P23921 792 aa16.15■□□□□ 0.18
VARS2-201ENST00000321897 RGS7P49802 495 aa16.15■□□□□ 0.18
VARS2-201ENST00000321897 STXBP2Q15833 593 aa16.15■□□□□ 0.18
VARS2-201ENST00000321897 IZUMO3Q5VZ72 239 aa16.15■□□□□ 0.18
VARS2-201ENST00000321897 PYROXD1Q8WU10 500 aa16.15■□□□□ 0.18
VARS2-201ENST00000321897 DCPSQ96C86 337 aaKnown RBP16.15■□□□□ 0.18
VARS2-201ENST00000321897 RGPD5Q99666 1765 aa16.15■□□□□ 0.18
VARS2-201ENST00000321897 SPDYE2BA6NHP3 402 aa16.15■□□□□ 0.18
VARS2-201ENST00000321897 SPDYE6P0CI01 402 aa16.15■□□□□ 0.18
VARS2-201ENST00000321897 DEUP1Q05D60 604 aa16.15■□□□□ 0.18
VARS2-201ENST00000321897 ZNF699Q32M78 642 aa16.15■□□□□ 0.18
VARS2-201ENST00000321897 ISLR2Q6UXK2 745 aa16.15■□□□□ 0.18
VARS2-201ENST00000321897 GPD1LQ8N335 351 aa16.15■□□□□ 0.18
VARS2-201ENST00000321897 MCPH1Q8NEM0 835 aa16.15■□□□□ 0.18
VARS2-201ENST00000321897 SMYD2Q9NRG4 433 aa16.15■□□□□ 0.18
VARS2-201ENST00000321897 RHBDL2Q9NX52 303 aa16.15■□□□□ 0.18
VARS2-201ENST00000321897 MCM8Q9UJA3 840 aa16.15■□□□□ 0.18
VARS2-201ENST00000321897 GOLGA4Q13439 2230 aaKnown RBP16.15■□□□□ 0.18
VARS2-201ENST00000321897 PODXLO00592 558 aa16.14■□□□□ 0.18
VARS2-201ENST00000321897 AGTP01019 485 aa16.14■□□□□ 0.18
VARS2-201ENST00000321897 MYCP01106 439 aaPredicted RBP16.14■□□□□ 0.18
VARS2-201ENST00000321897 SHBGP04278 402 aa16.14■□□□□ 0.18
VARS2-201ENST00000321897 POLR2BP30876 1174 aaKnown RBP16.14■□□□□ 0.18
VARS2-201ENST00000321897 FLT3P36888 993 aa16.14■□□□□ 0.18
VARS2-201ENST00000321897 CAP2P40123 477 aa16.14■□□□□ 0.18
VARS2-201ENST00000321897 NT5C2P49902 561 aa16.14■□□□□ 0.18
VARS2-201ENST00000321897 JAK3P52333 1124 aa16.14■□□□□ 0.18
VARS2-201ENST00000321897 OVGP1Q12889 678 aa16.14■□□□□ 0.18
VARS2-201ENST00000321897 DBN1Q16643 649 aa16.14■□□□□ 0.18
VARS2-201ENST00000321897 RNF168Q8IYW5 571 aaPredicted RBP16.14■□□□□ 0.18
VARS2-201ENST00000321897 DCLK2Q8N568 766 aa16.14■□□□□ 0.18
VARS2-201ENST00000321897 FERMT1Q9BQL6 677 aa16.14■□□□□ 0.18
VARS2-201ENST00000321897 UBN1Q9NPG3 1134 aa16.14■□□□□ 0.18
VARS2-201ENST00000321897 HESX1Q9UBX0 185 aa16.14■□□□□ 0.18
VARS2-201ENST00000321897 RTN2O75298 545 aa16.14■□□□□ 0.17
VARS2-201ENST00000321897 HLA-DRAP01903 254 aa16.14■□□□□ 0.17
VARS2-201ENST00000321897 INHBAP08476 426 aa16.14■□□□□ 0.17
VARS2-201ENST00000321897 RALAP11233 206 aa16.14■□□□□ 0.17
VARS2-201ENST00000321897 CA8P35219 290 aa16.14■□□□□ 0.17
VARS2-201ENST00000321897 PPP3CAQ08209 521 aa16.14■□□□□ 0.17
VARS2-201ENST00000321897 MAPK6Q16659 721 aa16.14■□□□□ 0.17
VARS2-201ENST00000321897 PALB2Q86YC2 1186 aa16.14■□□□□ 0.17
VARS2-201ENST00000321897 ZBTB45Q96K62 511 aaPredicted RBP16.14■□□□□ 0.17
VARS2-201ENST00000321897 MCEEQ96PE7 176 aa16.14■□□□□ 0.17
VARS2-201ENST00000321897 C10orf88Q9H8K7 445 aa16.14■□□□□ 0.17
VARS2-201ENST00000321897 CCDC78A2IDD5 438 aa16.14■□□□□ 0.17
VARS2-201ENST00000321897 A8MUI8 341 aa16.14■□□□□ 0.17
VARS2-201ENST00000321897 SPATA31C1P0DKV0 1188 aa16.14■□□□□ 0.17
VARS2-201ENST00000321897 YY1P25490 414 aa16.14■□□□□ 0.17
VARS2-201ENST00000321897 NPTX2P47972 431 aa16.14■□□□□ 0.17
VARS2-201ENST00000321897 CXCL9Q07325 125 aa16.14■□□□□ 0.17
VARS2-201ENST00000321897 CUL3Q13618 768 aa16.14■□□□□ 0.17
VARS2-201ENST00000321897 DPP9Q86TI2 863 aa16.14■□□□□ 0.17
VARS2-201ENST00000321897 ANKRD36BP1Q96IX9 119 aa16.14■□□□□ 0.17
VARS2-201ENST00000321897 E2F8A0AVK6 867 aa16.14■□□□□ 0.17
VARS2-201ENST00000321897 CAPN9O14815 690 aa16.14■□□□□ 0.17
VARS2-201ENST00000321897 HAUS5O94927 633 aa16.14■□□□□ 0.17
VARS2-201ENST00000321897 GGPS1O95749 300 aa16.14■□□□□ 0.17
VARS2-201ENST00000321897 ARSEP51690 589 aa16.14■□□□□ 0.17
VARS2-201ENST00000321897 PDIA2Q13087 525 aaKnown RBP16.14■□□□□ 0.17
VARS2-201ENST00000321897 ANKRD20A2Q5SQ80 823 aa16.14■□□□□ 0.17
VARS2-201ENST00000321897 ANKRD20A1Q5TYW2 823 aa16.14■□□□□ 0.17
VARS2-201ENST00000321897 IQCKQ8N0W5 287 aa16.14■□□□□ 0.17
VARS2-201ENST00000321897 PWWP2AQ96N64 755 aa16.14■□□□□ 0.17
VARS2-201ENST00000321897 ADPGKQ9BRR6 497 aa16.14■□□□□ 0.17
VARS2-201ENST00000321897 NVLO15381 856 aaKnown RBP16.13■□□□□ 0.17
VARS2-201ENST00000321897 DCTN3O75935 186 aa16.13■□□□□ 0.17
VARS2-201ENST00000321897 SNUPNO95149 360 aaKnown RBP16.13■□□□□ 0.17
VARS2-201ENST00000321897 CHRNA3P32297 505 aa16.13■□□□□ 0.17
VARS2-201ENST00000321897 GMPSP49915 693 aaPredicted RBP16.13■□□□□ 0.17
VARS2-201ENST00000321897 PSMC1P62191 440 aaKnown RBP16.13■□□□□ 0.17
VARS2-201ENST00000321897 LRRC43Q8N309 656 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms