RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 PLA2G12BQ9BX93 195 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 TSSK1BQ9BXA7 367 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 CARD9Q9H257 536 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 C10orf88Q9H8K7 445 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 LRRC4CQ9HCJ2 640 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 MAD2L2Q9UI95 211 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 C4BP0C0L5 1744 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 TCRBV7S2A1N4TA0A589 114 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 MEI4A8MW99 385 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 COPEO14579 308 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 PJA2O43164 708 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 MGRN1O60291 552 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 RALAP11233 206 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 PCP11498 1178 aaKnown RBP7.97□□□□□ -1.13
CDHR3-201ENST00000317716 AKR1B1P15121 316 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 PECAM1P16284 738 aaPredicted RBP7.97□□□□□ -1.13
CDHR3-201ENST00000317716 CYP11B2P19099 503 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 TCN1P20061 433 aaPredicted RBP7.97□□□□□ -1.13
CDHR3-201ENST00000317716 CHKAP35790 457 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 TPD52P55327 224 aaPredicted RBP7.97□□□□□ -1.13
CDHR3-201ENST00000317716 PTENP60484 403 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 KCTD21Q4G0X4 260 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 HGSNATQ68CP4 663 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 MIS18BP1Q6P0N0 1132 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 FAM228AQ86W67 206 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 RFX6Q8HWS3 928 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 ARID3BQ8IVW6 561 aaPredicted RBP7.97□□□□□ -1.13
CDHR3-201ENST00000317716 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.97□□□□□ -1.13
CDHR3-201ENST00000317716 SHISA4Q96DD7 197 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 TRIM56Q9BRZ2 755 aaKnown RBP7.97□□□□□ -1.13
CDHR3-201ENST00000317716 NUF2Q9BZD4 464 aa7.97□□□□□ -1.13
CDHR3-201ENST00000317716 A1CFQ9NQ94 594 aaKnown RBP7.97□□□□□ -1.13
CDHR3-201ENST00000317716 ZMYND8Q9ULU4 1186 aaPredicted RBP7.97□□□□□ -1.13
CDHR3-201ENST00000317716 AFDNP55196 1824 aaKnown RBP7.96□□□□□ -1.13
CDHR3-201ENST00000317716 XPO1O14980 1071 aaKnown RBP7.96□□□□□ -1.13
CDHR3-201ENST00000317716 SLC16A4O15374 487 aa7.96□□□□□ -1.13
CDHR3-201ENST00000317716 CCDC22O60826 627 aa7.96□□□□□ -1.13
CDHR3-201ENST00000317716 MED24O75448 989 aa7.96□□□□□ -1.13
CDHR3-201ENST00000317716 LMNAP02545 664 aaKnown RBP7.96□□□□□ -1.13
CDHR3-201ENST00000317716 RARGP13631 454 aa7.96□□□□□ -1.13
CDHR3-201ENST00000317716 PEX5P50542 639 aa7.96□□□□□ -1.13
CDHR3-201ENST00000317716 ARHGAP4P98171 946 aa7.96□□□□□ -1.13
CDHR3-201ENST00000317716 PDE1BQ01064 536 aa7.96□□□□□ -1.13
CDHR3-201ENST00000317716 ASPHQ12797 758 aa7.96□□□□□ -1.13
CDHR3-201ENST00000317716 SEMA3FQ13275 785 aa7.96□□□□□ -1.13
CDHR3-201ENST00000317716 GEN1Q17RS7 908 aa7.96□□□□□ -1.13
CDHR3-201ENST00000317716 C12orf60Q5U649 245 aa7.96□□□□□ -1.13
CDHR3-201ENST00000317716 RSPH3Q86UC2 560 aa7.96□□□□□ -1.13
CDHR3-201ENST00000317716 MREGQ8N565 214 aa7.96□□□□□ -1.13
CDHR3-201ENST00000317716 CXorf38Q8TB03 319 aa7.96□□□□□ -1.13
CDHR3-201ENST00000317716 KAT5Q92993 513 aa7.96□□□□□ -1.13
CDHR3-201ENST00000317716 FAM111AQ96PZ2 611 aa7.96□□□□□ -1.13
CDHR3-201ENST00000317716 MOV10L1Q9BXT6 1211 aaKnown RBP7.96□□□□□ -1.13
CDHR3-201ENST00000317716 TTYH3Q9C0H2 523 aa7.96□□□□□ -1.13
CDHR3-201ENST00000317716 CHST7Q9NS84 486 aa7.96□□□□□ -1.13
CDHR3-201ENST00000317716 CLIC5Q9NZA1 410 aa7.96□□□□□ -1.13
CDHR3-201ENST00000317716 NEU2Q9Y3R4 380 aa7.96□□□□□ -1.13
CDHR3-201ENST00000317716 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.96□□□□□ -1.13
CDHR3-201ENST00000317716 PFASO15067 1338 aa7.96□□□□□ -1.13
CDHR3-201ENST00000317716 ZC3H4Q9UPT8 1303 aaKnown RBP7.96□□□□□ -1.13
CDHR3-201ENST00000317716 SYNJ2BP-COX16A0A087WUM0 186 aa7.96□□□□□ -1.14
CDHR3-201ENST00000317716 ZBTB39O15060 712 aa7.96□□□□□ -1.14
CDHR3-201ENST00000317716 NOL3O60936 208 aaKnown RBP7.96□□□□□ -1.14
CDHR3-201ENST00000317716 PGM3O95394 542 aa7.96□□□□□ -1.14
CDHR3-201ENST00000317716 SGPL1O95470 568 aa7.96□□□□□ -1.14
CDHR3-201ENST00000317716 RARAP10276 462 aa7.96□□□□□ -1.14
CDHR3-201ENST00000317716 SCNN1BP51168 640 aa7.96□□□□□ -1.14
CDHR3-201ENST00000317716 AP2B1P63010 937 aa7.96□□□□□ -1.14
CDHR3-201ENST00000317716 CXCL9Q07325 125 aa7.96□□□□□ -1.14
CDHR3-201ENST00000317716 MED21Q13503 144 aa7.96□□□□□ -1.14
CDHR3-201ENST00000317716 CDO1Q16878 200 aa7.96□□□□□ -1.14
CDHR3-201ENST00000317716 ZCWPW2Q504Y3 356 aa7.96□□□□□ -1.14
CDHR3-201ENST00000317716 PPP1R18Q6NYC8 613 aa7.96□□□□□ -1.14
CDHR3-201ENST00000317716 LRRC55Q6ZSA7 311 aa7.96□□□□□ -1.14
CDHR3-201ENST00000317716 CPNE8Q86YQ8 564 aa7.96□□□□□ -1.14
CDHR3-201ENST00000317716 TEX9Q8N6V9 391 aa7.96□□□□□ -1.14
CDHR3-201ENST00000317716 POU5F2Q8N7G0 328 aa7.96□□□□□ -1.14
CDHR3-201ENST00000317716 FAM81BQ96LP2 452 aa7.96□□□□□ -1.14
CDHR3-201ENST00000317716 TSNARE1Q96NA8 513 aa7.96□□□□□ -1.14
CDHR3-201ENST00000317716 RIOK1Q9BRS2 568 aaKnown RBP7.96□□□□□ -1.14
CDHR3-201ENST00000317716 APOL6Q9BWW8 343 aa7.96□□□□□ -1.14
CDHR3-201ENST00000317716 EHMT1Q9H9B1 1298 aa7.96□□□□□ -1.14
CDHR3-201ENST00000317716 COX16Q9P0S2 106 aa7.96□□□□□ -1.14
CDHR3-201ENST00000317716 NKX1-2Q9UD57 310 aaPredicted RBP7.96□□□□□ -1.14
CDHR3-201ENST00000317716 TESPA1A2RU30 521 aaPredicted RBP7.96□□□□□ -1.14
CDHR3-201ENST00000317716 USP1O94782 785 aa7.96□□□□□ -1.14
CDHR3-201ENST00000317716 SEC24DO94855 1032 aaPredicted RBP7.96□□□□□ -1.14
CDHR3-201ENST00000317716 GJB6O95452 261 aa7.96□□□□□ -1.14
CDHR3-201ENST00000317716 TMEM253P0C7T8 217 aa7.96□□□□□ -1.14
CDHR3-201ENST00000317716 ZSCAN5DPP0CG00 497 aa7.96□□□□□ -1.14
CDHR3-201ENST00000317716 YBX3P16989 372 aaKnown RBP eCLIP7.96□□□□□ -1.14
CDHR3-201ENST00000317716 GMPSP49915 693 aaPredicted RBP7.96□□□□□ -1.14
CDHR3-201ENST00000317716 POLGP54098 1239 aaPredicted RBP7.96□□□□□ -1.14
CDHR3-201ENST00000317716 PKN2Q16513 984 aaKnown RBP7.96□□□□□ -1.14
CDHR3-201ENST00000317716 QRICH1Q2TAL8 776 aa7.96□□□□□ -1.14
CDHR3-201ENST00000317716 PPP4R3CPQ6ZMV5 832 aa7.96□□□□□ -1.14
CDHR3-201ENST00000317716 TRMT10CQ7L0Y3 403 aaKnown RBP7.96□□□□□ -1.14
CDHR3-201ENST00000317716 MICALL2Q8IY33 904 aa7.96□□□□□ -1.14
CDHR3-201ENST00000317716 PDIK1LQ8N165 341 aa7.96□□□□□ -1.14
CDHR3-201ENST00000317716 PPP4R1Q8TF05 950 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms