RNA–Protein interactions for RNA: ENST00000316788.11

AP3S1-201, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-201ENST00000316788 SCYL3Q8IZE3 742 aa20.86■□□□□ 0.93
AP3S1-201ENST00000316788 CACNA2D3Q8IZS8 1091 aa20.86■□□□□ 0.93
AP3S1-201ENST00000316788 CHMP6Q96FZ7 201 aa20.86■□□□□ 0.93
AP3S1-201ENST00000316788 SEC16BQ96JE7 1060 aa20.86■□□□□ 0.93
AP3S1-201ENST00000316788 BTBD6Q96KE9 485 aa20.86■□□□□ 0.93
AP3S1-201ENST00000316788 CHORDC1Q9UHD1 332 aaPredicted RBP20.86■□□□□ 0.93
AP3S1-201ENST00000316788 DOCK1Q14185 1865 aa20.85■□□□□ 0.93
AP3S1-201ENST00000316788 SPATA31C2B4DYI2 1134 aa20.85■□□□□ 0.93
AP3S1-201ENST00000316788 C4BPAP04003 597 aaKnown RBP20.85■□□□□ 0.93
AP3S1-201ENST00000316788 DLATP10515 647 aaKnown RBP20.85■□□□□ 0.93
AP3S1-201ENST00000316788 DSG3P32926 999 aa20.85■□□□□ 0.93
AP3S1-201ENST00000316788 PRKCEQ02156 737 aa20.85■□□□□ 0.93
AP3S1-201ENST00000316788 ACTN3Q08043 901 aaPredicted RBP20.85■□□□□ 0.93
AP3S1-201ENST00000316788 GNPTABQ3T906 1256 aa20.85■□□□□ 0.93
AP3S1-201ENST00000316788 GKAP1Q5VSY0 366 aaPredicted RBP20.85■□□□□ 0.93
AP3S1-201ENST00000316788 FAM213AQ9BRX8 229 aa20.85■□□□□ 0.93
AP3S1-201ENST00000316788 POLR3FQ9H1D9 316 aaPredicted RBP20.85■□□□□ 0.93
AP3S1-201ENST00000316788 ADAM7Q9H2U9 754 aa20.85■□□□□ 0.93
AP3S1-201ENST00000316788 LRRC4CQ9HCJ2 640 aa20.85■□□□□ 0.93
AP3S1-201ENST00000316788 RIPK3Q9Y572 518 aa20.85■□□□□ 0.93
AP3S1-201ENST00000316788 MROH7Q68CQ1 1323 aa20.85■□□□□ 0.93
AP3S1-201ENST00000316788 CLDN3O15551 220 aa20.84■□□□□ 0.93
AP3S1-201ENST00000316788 PSTPIP1O43586 416 aa20.84■□□□□ 0.93
AP3S1-201ENST00000316788 RGS20O76081 388 aa20.84■□□□□ 0.93
AP3S1-201ENST00000316788 ACTR2P61160 394 aa20.84■□□□□ 0.93
AP3S1-201ENST00000316788 DGKZQ13574 1117 aa20.84■□□□□ 0.93
AP3S1-201ENST00000316788 PPP1R7Q15435 360 aa20.84■□□□□ 0.93
AP3S1-201ENST00000316788 LACTB2Q53H82 288 aaPredicted RBP20.84■□□□□ 0.93
AP3S1-201ENST00000316788 SLFN12LQ6IEE8 588 aa20.84■□□□□ 0.93
AP3S1-201ENST00000316788 SWSAP1Q6NVH7 229 aa20.84■□□□□ 0.93
AP3S1-201ENST00000316788 CCDC121Q6ZUS5 278 aa20.84■□□□□ 0.93
AP3S1-201ENST00000316788 ATXN2LQ8WWM7 1075 aaKnown RBP20.84■□□□□ 0.93
AP3S1-201ENST00000316788 ZNF516Q92618 1163 aa20.84■□□□□ 0.93
AP3S1-201ENST00000316788 KAT2BQ92831 832 aa20.84■□□□□ 0.93
AP3S1-201ENST00000316788 DCPSQ96C86 337 aaKnown RBP20.84■□□□□ 0.93
AP3S1-201ENST00000316788 BICD1Q96G01 975 aa20.84■□□□□ 0.93
AP3S1-201ENST00000316788 SEPT9Q9UHD8 586 aaPredicted RBP20.84■□□□□ 0.93
AP3S1-201ENST00000316788 CNTN6Q9UQ52 1028 aa20.84■□□□□ 0.93
AP3S1-201ENST00000316788 PROSCO94903 275 aa20.84■□□□□ 0.93
AP3S1-201ENST00000316788 LDHAP00338 332 aaKnown RBP20.84■□□□□ 0.93
AP3S1-201ENST00000316788 SUPT20HL2P0C7V6 817 aa20.84■□□□□ 0.93
AP3S1-201ENST00000316788 LIG4P49917 911 aa20.84■□□□□ 0.93
AP3S1-201ENST00000316788 IFT88Q13099 833 aa20.84■□□□□ 0.93
AP3S1-201ENST00000316788 SUPT20HL1Q3ZLR7 823 aa20.84■□□□□ 0.93
AP3S1-201ENST00000316788 LIN9Q5TKA1 542 aa20.84■□□□□ 0.93
AP3S1-201ENST00000316788 MON1BQ7L1V2 547 aa20.84■□□□□ 0.93
AP3S1-201ENST00000316788 TAOK1Q7L7X3 1001 aa20.84■□□□□ 0.93
AP3S1-201ENST00000316788 CPNE8Q86YQ8 564 aa20.84■□□□□ 0.93
AP3S1-201ENST00000316788 ZNF280CQ8ND82 737 aa20.84■□□□□ 0.93
AP3S1-201ENST00000316788 ZC3H15Q8WU90 426 aaKnown RBP20.84■□□□□ 0.93
AP3S1-201ENST00000316788 DDX27Q96GQ7 796 aaKnown RBP20.84■□□□□ 0.93
AP3S1-201ENST00000316788 SNF8Q96H20 258 aa20.84■□□□□ 0.93
AP3S1-201ENST00000316788 ZNF317Q96PQ6 595 aaPredicted RBP20.84■□□□□ 0.93
AP3S1-201ENST00000316788 AZI2Q9H6S1 392 aa20.84■□□□□ 0.93
AP3S1-201ENST00000316788 ZNF214Q9UL59 606 aaPredicted RBP20.84■□□□□ 0.93
AP3S1-201ENST00000316788 CAPN7Q9Y6W3 813 aa20.84■□□□□ 0.93
AP3S1-201ENST00000316788 C19orf81C9J6K1 198 aa20.83■□□□□ 0.92
AP3S1-201ENST00000316788 RASGRF2O14827 1237 aa20.83■□□□□ 0.92
AP3S1-201ENST00000316788 ASAP2O43150 1006 aa20.83■□□□□ 0.92
AP3S1-201ENST00000316788 GAS8O95995 478 aa20.83■□□□□ 0.92
AP3S1-201ENST00000316788 HLA-DRAP01903 254 aa20.83■□□□□ 0.92
AP3S1-201ENST00000316788 GHRP10912 638 aa20.83■□□□□ 0.92
AP3S1-201ENST00000316788 ACO1P21399 889 aaKnown RBP20.83■□□□□ 0.92
AP3S1-201ENST00000316788 ICAM3P32942 547 aa20.83■□□□□ 0.92
AP3S1-201ENST00000316788 NSFP46459 744 aaKnown RBP20.83■□□□□ 0.92
AP3S1-201ENST00000316788 KRT17Q04695 432 aa20.83■□□□□ 0.92
AP3S1-201ENST00000316788 STRN3Q13033 797 aa20.83■□□□□ 0.92
AP3S1-201ENST00000316788 QPCTQ16769 361 aa20.83■□□□□ 0.92
AP3S1-201ENST00000316788 SNRNP48Q6IEG0 339 aaKnown RBP20.83■□□□□ 0.92
AP3S1-201ENST00000316788 APOBEC3FQ8IUX4 373 aaKnown RBP20.83■□□□□ 0.92
AP3S1-201ENST00000316788 CCDC60Q8IWA6 550 aaPredicted RBP20.83■□□□□ 0.92
AP3S1-201ENST00000316788 CABS1Q96KC9 395 aa20.83■□□□□ 0.92
AP3S1-201ENST00000316788 SERPINB12Q96P63 405 aa20.83■□□□□ 0.92
AP3S1-201ENST00000316788 FNBP1Q96RU3 617 aa20.83■□□□□ 0.92
AP3S1-201ENST00000316788 FZD1Q9UP38 647 aa20.83■□□□□ 0.92
AP3S1-201ENST00000316788 SORBS3O60504 671 aa20.82■□□□□ 0.92
AP3S1-201ENST00000316788 TCEA3O75764 348 aa20.82■□□□□ 0.92
AP3S1-201ENST00000316788 ATG7O95352 703 aa20.82■□□□□ 0.92
AP3S1-201ENST00000316788 CHN1P15882 459 aa20.82■□□□□ 0.92
AP3S1-201ENST00000316788 TBXAS1P24557 533 aaPredicted RBP20.82■□□□□ 0.92
AP3S1-201ENST00000316788 NAMPTP43490 491 aa20.82■□□□□ 0.92
AP3S1-201ENST00000316788 AUHQ13825 339 aaKnown RBP20.82■□□□□ 0.92
AP3S1-201ENST00000316788 CPLX4Q7Z7G2 160 aa20.82■□□□□ 0.92
AP3S1-201ENST00000316788 PHF13Q86YI8 300 aaPredicted RBP20.82■□□□□ 0.92
AP3S1-201ENST00000316788 BBOF1Q8ND07 529 aa20.82■□□□□ 0.92
AP3S1-201ENST00000316788 DCLK3Q9C098 648 aa20.82■□□□□ 0.92
AP3S1-201ENST00000316788 ACAD9Q9H845 621 aa20.82■□□□□ 0.92
AP3S1-201ENST00000316788 MRPL47Q9HD33 250 aaKnown RBP20.82■□□□□ 0.92
AP3S1-201ENST00000316788 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.82■□□□□ 0.924e-6■■■■■ 72.1
AP3S1-201ENST00000316788 TP73O15350 636 aa20.81■□□□□ 0.92
AP3S1-201ENST00000316788 RRM1P23921 792 aa20.81■□□□□ 0.92
AP3S1-201ENST00000316788 IVDP26440 423 aa20.81■□□□□ 0.92
AP3S1-201ENST00000316788 ATP5DP30049 168 aa20.81■□□□□ 0.92
AP3S1-201ENST00000316788 KCNJ1P48048 391 aa20.81■□□□□ 0.92
AP3S1-201ENST00000316788 EMC2Q15006 297 aa20.81■□□□□ 0.92
AP3S1-201ENST00000316788 RNF187Q5TA31 235 aaPredicted RBP20.81■□□□□ 0.92
AP3S1-201ENST00000316788 NBPF12Q5TAG4 269 aaPredicted RBP20.81■□□□□ 0.92
AP3S1-201ENST00000316788 RELL1Q8IUW5 271 aa20.81■□□□□ 0.92
AP3S1-201ENST00000316788 SULF1Q8IWU6 871 aa20.81■□□□□ 0.92
AP3S1-201ENST00000316788 KATNAL2Q8IYT4 538 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms