RNA–Protein interactions for RNA: ENST00000312579.3

CCDC85B-201, Transcript of coiled-coil domain containing 85B, humanhuman

APPRIS P1 BASIC

Gene CCDC85B, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85B-201ENST00000312579 C2CD2Q9Y426 696 aa24.23■■□□□ 1.47
CCDC85B-201ENST00000312579 LRRC10BA6NIK2 292 aa24.22■■□□□ 1.47
CCDC85B-201ENST00000312579 HOXA2O43364 376 aa24.22■■□□□ 1.47
CCDC85B-201ENST00000312579 LRRN2O75325 713 aa24.22■■□□□ 1.47
CCDC85B-201ENST00000312579 DDHD2O94830 711 aa24.22■■□□□ 1.47
CCDC85B-201ENST00000312579 ATP2A2P16615 1042 aaKnown RBP24.22■■□□□ 1.47
CCDC85B-201ENST00000312579 FMO5P49326 533 aa24.22■■□□□ 1.47
CCDC85B-201ENST00000312579 FAM109BQ6ICB4 259 aaPredicted RBP24.22■■□□□ 1.47
CCDC85B-201ENST00000312579 USP37Q86T82 979 aa24.22■■□□□ 1.47
CCDC85B-201ENST00000312579 C1orf127Q8N9H9 656 aa24.22■■□□□ 1.47
CCDC85B-201ENST00000312579 ANKRD36BP1Q96IX9 119 aa24.22■■□□□ 1.47
CCDC85B-201ENST00000312579 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.22■■□□□ 1.471e-34■■■■■ 428.5
CCDC85B-201ENST00000312579 RNF216Q9NWF9 866 aaPredicted RBP24.22■■□□□ 1.47
CCDC85B-201ENST00000312579 DPP3Q9NY33 737 aa24.22■■□□□ 1.47
CCDC85B-201ENST00000312579 DERAQ9Y315 318 aa24.22■■□□□ 1.47
CCDC85B-201ENST00000312579 FNDC1Q4ZHG4 1894 aaPredicted RBP24.22■■□□□ 1.47
CCDC85B-201ENST00000312579 GRXCR1A8MXD5 290 aa24.21■■□□□ 1.47
CCDC85B-201ENST00000312579 TNNC2P02585 160 aa24.21■■□□□ 1.47
CCDC85B-201ENST00000312579 ENPEPQ07075 957 aa24.21■■□□□ 1.47
CCDC85B-201ENST00000312579 BIRC3Q13489 604 aa24.21■■□□□ 1.47
CCDC85B-201ENST00000312579 C15orf39Q6ZRI6 1047 aa24.21■■□□□ 1.47
CCDC85B-201ENST00000312579 TRAPPC11Q7Z392 1133 aa24.21■■□□□ 1.47
CCDC85B-201ENST00000312579 HERC6Q8IVU3 1022 aa24.21■■□□□ 1.47
CCDC85B-201ENST00000312579 ZNF689Q96CS4 500 aaPredicted RBP24.21■■□□□ 1.47
CCDC85B-201ENST00000312579 MTIF3Q9H2K0 278 aaKnown RBP24.21■■□□□ 1.47
CCDC85B-201ENST00000312579 RC3H2Q9HBD1 1191 aaKnown RBP24.21■■□□□ 1.47
CCDC85B-201ENST00000312579 TMEM8AQ9HCN3 771 aa24.21■■□□□ 1.47
CCDC85B-201ENST00000312579 PDE4DIPQ5VU43 2346 aa24.21■■□□□ 1.47
CCDC85B-201ENST00000312579 CASTOR2A6NHX0 329 aa24.2■■□□□ 1.47
CCDC85B-201ENST00000312579 GOLGA6L6A8MZA4 724 aa24.2■■□□□ 1.47
CCDC85B-201ENST00000312579 PPEF2O14830 753 aa24.2■■□□□ 1.47
CCDC85B-201ENST00000312579 TEX33O43247 280 aa24.2■■□□□ 1.47
CCDC85B-201ENST00000312579 GJB5O95377 273 aa24.2■■□□□ 1.47
CCDC85B-201ENST00000312579 VNN1O95497 513 aa24.2■■□□□ 1.47
CCDC85B-201ENST00000312579 TPM3P06753 285 aa24.2■■□□□ 1.47
CCDC85B-201ENST00000312579 IGFBP6P24592 240 aaPredicted RBP24.2■■□□□ 1.47
CCDC85B-201ENST00000312579 MXI1P50539 228 aa24.2■■□□□ 1.47
CCDC85B-201ENST00000312579 RNASELQ05823 741 aaKnown RBP24.2■■□□□ 1.47
CCDC85B-201ENST00000312579 GRIK3Q13003 919 aa24.2■■□□□ 1.47
CCDC85B-201ENST00000312579 SPC24Q8NBT2 197 aa24.2■■□□□ 1.47
CCDC85B-201ENST00000312579 BEST2Q8NFU1 509 aa24.2■■□□□ 1.47
CCDC85B-201ENST00000312579 CACTINQ8WUQ7 758 aaKnown RBP24.2■■□□□ 1.47
CCDC85B-201ENST00000312579 SLC9A7Q96T83 725 aa24.2■■□□□ 1.47
CCDC85B-201ENST00000312579 YME1L1Q96TA2 773 aa24.2■■□□□ 1.47
CCDC85B-201ENST00000312579 PAAF1Q9BRP4 392 aa24.2■■□□□ 1.47
CCDC85B-201ENST00000312579 CRACR2AQ9BSW2 395 aa24.2■■□□□ 1.47
CCDC85B-201ENST00000312579 ZBED2Q9BTP6 218 aa24.2■■□□□ 1.47
CCDC85B-201ENST00000312579 SIX4Q9UIU6 781 aa24.2■■□□□ 1.47
CCDC85B-201ENST00000312579 UBQLN1Q9UMX0 589 aaKnown RBP24.2■■□□□ 1.47
CCDC85B-201ENST00000312579 TDRD15B5MCY1 1934 aaKnown RBP24.2■■□□□ 1.46
CCDC85B-201ENST00000312579 CST3P01034 146 aaPredicted RBP24.2■■□□□ 1.46
CCDC85B-201ENST00000312579 ITGB3P05106 788 aa24.2■■□□□ 1.46
CCDC85B-201ENST00000312579 RABGGTBP53611 331 aa24.2■■□□□ 1.46
CCDC85B-201ENST00000312579 MYL7Q01449 175 aa24.2■■□□□ 1.46
CCDC85B-201ENST00000312579 ZACNQ401N2 412 aa24.2■■□□□ 1.46
CCDC85B-201ENST00000312579 KRT39Q6A163 491 aa24.2■■□□□ 1.46
CCDC85B-201ENST00000312579 CXorf38Q8TB03 319 aa24.2■■□□□ 1.46
CCDC85B-201ENST00000312579 TAS1R2Q8TE23 839 aa24.2■■□□□ 1.46
CCDC85B-201ENST00000312579 DNAJB4Q9UDY4 337 aa24.2■■□□□ 1.46
CCDC85B-201ENST00000312579 LAMA2P24043 3122 aaKnown RBP24.2■■□□□ 1.46
CCDC85B-201ENST00000312579 LGALS16A8MUM7 142 aa24.19■■□□□ 1.46
CCDC85B-201ENST00000312579 STX10O60499 249 aa24.19■■□□□ 1.46
CCDC85B-201ENST00000312579 PHACTR2O75167 634 aa24.19■■□□□ 1.46
CCDC85B-201ENST00000312579 TPM2P07951 284 aa24.19■■□□□ 1.46
CCDC85B-201ENST00000312579 KRT19P08727 400 aa24.19■■□□□ 1.46
CCDC85B-201ENST00000312579 GTF2H1P32780 548 aa24.19■■□□□ 1.46
CCDC85B-201ENST00000312579 NT5DC4Q86YG4 428 aa24.19■■□□□ 1.46
CCDC85B-201ENST00000312579 SEMA4DQ92854 862 aa24.19■■□□□ 1.46
CCDC85B-201ENST00000312579 NRDE2Q9H7Z3 1164 aa24.19■■□□□ 1.46
CCDC85B-201ENST00000312579 RTN4Q9NQC3 1192 aaKnown RBP24.19■■□□□ 1.46
CCDC85B-201ENST00000312579 SLC38A7Q9NVC3 462 aa24.19■■□□□ 1.46
CCDC85B-201ENST00000312579 KANSL3Q9P2N6 904 aa24.19■■□□□ 1.46
CCDC85B-201ENST00000312579 A0A1B0GTH6 734 aa24.18■■□□□ 1.46
CCDC85B-201ENST00000312579 POLR2BP30876 1174 aaKnown RBP24.18■■□□□ 1.46
CCDC85B-201ENST00000312579 PHOSPHO2Q8TCD6 241 aa24.18■■□□□ 1.46
CCDC85B-201ENST00000312579 PI4K2AQ9BTU6 479 aa24.18■■□□□ 1.46
CCDC85B-201ENST00000312579 RANBP2P49792 3224 aaKnown RBP24.17■■□□□ 1.46
CCDC85B-201ENST00000312579 F8W810 466 aa24.17■■□□□ 1.46
CCDC85B-201ENST00000312579 HLA-DRAP01903 254 aa24.17■■□□□ 1.46
CCDC85B-201ENST00000312579 MYOGP15173 224 aa24.17■■□□□ 1.46
CCDC85B-201ENST00000312579 PBX3P40426 434 aa24.17■■□□□ 1.46
CCDC85B-201ENST00000312579 KLK7P49862 253 aa24.17■■□□□ 1.46
CCDC85B-201ENST00000312579 CLCNKBP51801 687 aa24.17■■□□□ 1.46
CCDC85B-201ENST00000312579 AP3M2P53677 418 aa24.17■■□□□ 1.46
CCDC85B-201ENST00000312579 HTRA4P83105 476 aaPredicted RBP24.17■■□□□ 1.46
CCDC85B-201ENST00000312579 UBXN1Q04323 297 aa24.17■■□□□ 1.46
CCDC85B-201ENST00000312579 DSC1Q08554 894 aa24.17■■□□□ 1.46
CCDC85B-201ENST00000312579 TUSC3Q13454 348 aa24.17■■□□□ 1.46
CCDC85B-201ENST00000312579 BTG3Q14201 252 aaPredicted RBP24.17■■□□□ 1.46
CCDC85B-201ENST00000312579 NR1I3Q14994 352 aa24.17■■□□□ 1.46
CCDC85B-201ENST00000312579 FILIP1LQ4L180 1135 aa24.17■■□□□ 1.46
CCDC85B-201ENST00000312579 C9orf57Q5W0N0 161 aa24.17■■□□□ 1.46
CCDC85B-201ENST00000312579 COLGALT2Q8IYK4 626 aa24.17■■□□□ 1.46
CCDC85B-201ENST00000312579 TSPAN18Q96SJ8 248 aa24.17■■□□□ 1.46
CCDC85B-201ENST00000312579 AGAP1Q9UPQ3 857 aa24.17■■□□□ 1.46
CCDC85B-201ENST00000312579 LCHNA4D1U4 455 aa24.16■■□□□ 1.46
CCDC85B-201ENST00000312579 XPOTO43592 962 aaKnown RBP24.16■■□□□ 1.46
CCDC85B-201ENST00000312579 ZC3H11AO75152 810 aaKnown RBP eCLIP24.16■■□□□ 1.46
CCDC85B-201ENST00000312579 CYP3A5P20815 502 aa24.16■■□□□ 1.46
CCDC85B-201ENST00000312579 PIK3CAP42336 1068 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms