RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 RNF8O76064 485 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 CYP2C9P11712 490 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 NAT1P18440 290 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 FLT3P36888 993 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 EHHADHQ08426 723 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 ITGB3BPQ13352 177 aaPredicted RBP6.39□□□□□ -1.39
SEC22A-201ENST00000309934 SV2CQ496J9 727 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 CAPRIN2Q6IMN6 1127 aaKnown RBP6.39□□□□□ -1.39
SEC22A-201ENST00000309934 MAMDC4Q6UXC1 1216 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 BZW1Q7L1Q6 419 aaKnown RBP6.39□□□□□ -1.39
SEC22A-201ENST00000309934 BRSK2Q8IWQ3 736 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 THEM5Q8N1Q8 247 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 PDCD7Q8N8D1 485 aaKnown RBP6.39□□□□□ -1.39
SEC22A-201ENST00000309934 TTC13Q8NBP0 860 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 UHMK1Q8TAS1 419 aaKnown RBP6.39□□□□□ -1.39
SEC22A-201ENST00000309934 CCDC110Q8TBZ0 833 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 NIF3L1Q9GZT8 377 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 TUT1Q9H6E5 874 aaKnown RBP6.39□□□□□ -1.39
SEC22A-201ENST00000309934 CHST12Q9NRB3 414 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 EHD2Q9NZN4 543 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 DOCK1Q14185 1865 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 PAPPA2Q9BXP8 1791 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 NPHP3-ACAD11A0A0J9YXS1 232 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 DYNC1LI2O43237 492 aaPredicted RBP6.39□□□□□ -1.39
SEC22A-201ENST00000309934 CYP2C8P10632 490 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 ACADSBP45954 432 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 HIRAP54198 1017 aaPredicted RBP6.39□□□□□ -1.39
SEC22A-201ENST00000309934 TFAMQ00059 246 aaKnown RBP6.39□□□□□ -1.39
SEC22A-201ENST00000309934 BFSP2Q13515 415 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 TMEM132DQ14C87 1099 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 SYDE1Q6ZW31 735 aaPredicted RBP6.39□□□□□ -1.39
SEC22A-201ENST00000309934 DAAM2Q86T65 1068 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 ARFGAP2Q8N6H7 521 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 SREK1Q8WXA9 508 aaKnown RBP6.39□□□□□ -1.39
SEC22A-201ENST00000309934 RBM41Q96IZ5 413 aaKnown RBP6.39□□□□□ -1.39
SEC22A-201ENST00000309934 FAM114A2Q9NRY5 505 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 PRELID1Q9Y255 219 aa6.39□□□□□ -1.39
SEC22A-201ENST00000309934 PGRMC1O00264 195 aaKnown RBP6.38□□□□□ -1.39
SEC22A-201ENST00000309934 TRAPPC3O43617 180 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 LGALS2P05162 132 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 HNRNPCP07910 306 aaKnown RBP eCLIP6.38□□□□□ -1.39
SEC22A-201ENST00000309934 PBX1P40424 430 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 LAMTOR4Q0VGL1 99 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 CUL3Q13618 768 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 GRB14Q14449 540 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 ZCWPW2Q504Y3 356 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 PLA2G4FQ68DD2 849 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 SND1Q7KZF4 910 aaKnown RBP eCLIP6.38□□□□□ -1.39
SEC22A-201ENST00000309934 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.38□□□□□ -1.39
SEC22A-201ENST00000309934 GPR20Q99678 358 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 DHX33Q9H6R0 707 aaKnown RBP6.38□□□□□ -1.39
SEC22A-201ENST00000309934 IP6K2Q9UHH9 426 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 DSEQ9UL01 958 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 MYO5AQ9Y4I1 1855 aaKnown RBP6.38□□□□□ -1.39
SEC22A-201ENST00000309934 MROH7Q68CQ1 1323 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 TARSL2A2RTX5 802 aaKnown RBP6.38□□□□□ -1.39
SEC22A-201ENST00000309934 LRRD1A4D1F6 860 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 SOWAHDA6NJG2 315 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 PJA2O43164 708 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 HUS1O60921 280 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 ATP2C2O75185 946 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 FECHP22830 423 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 MARK3P27448 753 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 MAGEA8P43361 318 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 GCLMP48507 274 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 PSEN2P49810 448 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 ITIH3Q06033 890 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 GRIK4Q16099 956 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 HSP90AA5PQ58FG0 334 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 ZC3H12AQ5D1E8 599 aaKnown RBP6.38□□□□□ -1.39
SEC22A-201ENST00000309934 TRIM65Q6PJ69 517 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 TOGARAM2Q6ZUX3 1019 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 TMEM161BQ8NDZ6 487 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 PRPF31Q8WWY3 499 aaKnown RBP6.38□□□□□ -1.39
SEC22A-201ENST00000309934 RBPJLQ9UBG7 517 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 FER1L6Q2WGJ9 1857 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 PON1P27169 355 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 ARL2P36404 184 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 CTCFP49711 727 aaPredicted RBP6.38□□□□□ -1.39
SEC22A-201ENST00000309934 POLE2P56282 527 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 CAV1Q03135 178 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 MFSD10Q14728 455 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 ARID5BQ14865 1188 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 MAPRE1Q15691 268 aaKnown RBP6.38□□□□□ -1.39
SEC22A-201ENST00000309934 DNAJC24Q6P3W2 148 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 ABI1Q8IZP0 508 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 ZNF653Q96CK0 615 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 MFSD14AQ96MC6 490 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 UROC1Q96N76 676 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 TRIM7Q9C029 511 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 BTBD7Q9P203 1132 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 STK39Q9UEW8 545 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 LRFN2Q9ULH4 789 aa6.38□□□□□ -1.39
SEC22A-201ENST00000309934 TLR2O60603 784 aa6.37□□□□□ -1.39
SEC22A-201ENST00000309934 DUSP11O75319 330 aaKnown RBP6.37□□□□□ -1.39
SEC22A-201ENST00000309934 SLC8A1P32418 973 aa6.37□□□□□ -1.39
SEC22A-201ENST00000309934 PSMC6P62333 389 aa6.37□□□□□ -1.39
SEC22A-201ENST00000309934 NCOA4Q13772 614 aa6.37□□□□□ -1.39
SEC22A-201ENST00000309934 PLCB4Q15147 1175 aa6.37□□□□□ -1.39
SEC22A-201ENST00000309934 RCN1Q15293 331 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms