RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 GALNTL6Q49A17 601 aa15.29■□□□□ 0.04
SCUBE2-201ENST00000309263 OTOP1Q7RTM1 612 aa15.29■□□□□ 0.04
SCUBE2-201ENST00000309263 XXYLT1Q8NBI6 393 aa15.29■□□□□ 0.04
SCUBE2-201ENST00000309263 TEKT1Q969V4 418 aa15.29■□□□□ 0.04
SCUBE2-201ENST00000309263 UTP4Q969X6 686 aaKnown RBP15.29■□□□□ 0.04
SCUBE2-201ENST00000309263 CHKBQ9Y259 395 aa15.29■□□□□ 0.04
SCUBE2-201ENST00000309263 SPDYE5A6NIY4 337 aa15.28■□□□□ 0.04
SCUBE2-201ENST00000309263 EIF3DO15371 548 aaKnown RBP eCLIP15.28■□□□□ 0.04
SCUBE2-201ENST00000309263 RPA3P35244 121 aaPredicted RBP15.28■□□□□ 0.04
SCUBE2-201ENST00000309263 SREBF1P36956 1147 aa15.28■□□□□ 0.04
SCUBE2-201ENST00000309263 MAGEA4P43358 317 aa15.28■□□□□ 0.04
SCUBE2-201ENST00000309263 CPA2P48052 419 aa15.28■□□□□ 0.04
SCUBE2-201ENST00000309263 MFAP3P55082 362 aa15.28■□□□□ 0.04
SCUBE2-201ENST00000309263 SPARCL1Q14515 664 aa15.28■□□□□ 0.04
SCUBE2-201ENST00000309263 SLC15A2Q16348 729 aa15.28■□□□□ 0.04
SCUBE2-201ENST00000309263 PRR5LQ6MZQ0 368 aa15.28■□□□□ 0.04
SCUBE2-201ENST00000309263 VPS52Q8N1B4 723 aa15.28■□□□□ 0.04
SCUBE2-201ENST00000309263 MKNK1Q9BUB5 465 aa15.28■□□□□ 0.04
SCUBE2-201ENST00000309263 CCDC134Q9H6E4 229 aa15.28■□□□□ 0.04
SCUBE2-201ENST00000309263 PSMC4P43686 418 aa15.28■□□□□ 0.04
SCUBE2-201ENST00000309263 FMO1Q01740 532 aa15.28■□□□□ 0.04
SCUBE2-201ENST00000309263 KREMEN1Q96MU8 473 aa15.28■□□□□ 0.04
SCUBE2-201ENST00000309263 C10orf88Q9H8K7 445 aa15.28■□□□□ 0.04
SCUBE2-201ENST00000309263 RNPEPL1Q9HAU8 725 aa15.28■□□□□ 0.04
SCUBE2-201ENST00000309263 CYP3A7-CYP3A51PA0A087WV96 503 aa15.28■□□□□ 0.04
SCUBE2-201ENST00000309263 GGPS1O95749 300 aa15.28■□□□□ 0.04
SCUBE2-201ENST00000309263 ATP4AP20648 1035 aa15.28■□□□□ 0.04
SCUBE2-201ENST00000309263 CYP3A7P24462 503 aa15.28■□□□□ 0.04
SCUBE2-201ENST00000309263 PTDSS1P48651 473 aaKnown RBP15.28■□□□□ 0.04
SCUBE2-201ENST00000309263 PRELPP51888 382 aa15.28■□□□□ 0.04
SCUBE2-201ENST00000309263 POLGP54098 1239 aaPredicted RBP15.28■□□□□ 0.04
SCUBE2-201ENST00000309263 ATP13A4Q4VNC1 1196 aa15.28■□□□□ 0.04
SCUBE2-201ENST00000309263 BICD1Q96G01 975 aa15.28■□□□□ 0.04
SCUBE2-201ENST00000309263 HSD17B14Q9BPX1 270 aa15.28■□□□□ 0.04
SCUBE2-201ENST00000309263 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.28■□□□□ 0.04
SCUBE2-201ENST00000309263 GNAT1P11488 350 aa15.27■□□□□ 0.04
SCUBE2-201ENST00000309263 CALB2P22676 271 aa15.27■□□□□ 0.04
SCUBE2-201ENST00000309263 ABCB5Q2M3G0 1257 aa15.27■□□□□ 0.04
SCUBE2-201ENST00000309263 NBPF20Q3BBV1 942 aa15.27■□□□□ 0.04
SCUBE2-201ENST00000309263 MDH1BQ5I0G3 518 aa15.27■□□□□ 0.04
SCUBE2-201ENST00000309263 MIER3Q7Z3K6 550 aa15.27■□□□□ 0.04
SCUBE2-201ENST00000309263 ATL2Q8NHH9 583 aa15.27■□□□□ 0.04
SCUBE2-201ENST00000309263 TAS1R2Q8TE23 839 aa15.27■□□□□ 0.04
SCUBE2-201ENST00000309263 POLR3CQ9BUI4 534 aaPredicted RBP15.27■□□□□ 0.04
SCUBE2-201ENST00000309263 UNC45AQ9H3U1 944 aa15.27■□□□□ 0.04
SCUBE2-201ENST00000309263 WHRNQ9P202 907 aa15.27■□□□□ 0.04
SCUBE2-201ENST00000309263 CPSF2Q9P2I0 782 aaKnown RBP15.27■□□□□ 0.04
SCUBE2-201ENST00000309263 USH1CQ9Y6N9 552 aa15.27■□□□□ 0.04
SCUBE2-201ENST00000309263 RFC5P40937 340 aa15.27■□□□□ 0.03
SCUBE2-201ENST00000309263 PIK3CAP42336 1068 aa15.27■□□□□ 0.03
SCUBE2-201ENST00000309263 GPS1Q13098 491 aa15.27■□□□□ 0.03
SCUBE2-201ENST00000309263 Q4G0T1 1027 aa15.27■□□□□ 0.03
SCUBE2-201ENST00000309263 NLGN1Q8N2Q7 840 aa15.27■□□□□ 0.03
SCUBE2-201ENST00000309263 GRK7Q8WTQ7 553 aa15.27■□□□□ 0.03
SCUBE2-201ENST00000309263 KIFAP3Q92845 792 aa15.27■□□□□ 0.03
SCUBE2-201ENST00000309263 SEMA4DQ92854 862 aa15.27■□□□□ 0.03
SCUBE2-201ENST00000309263 SYT11Q9BT88 431 aa15.27■□□□□ 0.03
SCUBE2-201ENST00000309263 FRMPD4Q14CM0 1322 aa15.27■□□□□ 0.03
SCUBE2-201ENST00000309263 A0A1W2PPM1 405 aa15.27■□□□□ 0.03
SCUBE2-201ENST00000309263 TBX3O15119 743 aa15.27■□□□□ 0.03
SCUBE2-201ENST00000309263 OAS1P00973 400 aaKnown RBP15.27■□□□□ 0.03
SCUBE2-201ENST00000309263 GM2AP17900 193 aa15.27■□□□□ 0.03
SCUBE2-201ENST00000309263 TUBP50607 506 aa15.27■□□□□ 0.03
SCUBE2-201ENST00000309263 RCN2Q14257 317 aa15.27■□□□□ 0.03
SCUBE2-201ENST00000309263 LVRNQ6Q4G3 990 aa15.27■□□□□ 0.03
SCUBE2-201ENST00000309263 DNAJC9Q8WXX5 260 aa15.27■□□□□ 0.03
SCUBE2-201ENST00000309263 RBM17Q96I25 401 aaKnown RBP15.27■□□□□ 0.03
SCUBE2-201ENST00000309263 NT5C1BQ96P26 610 aa15.27■□□□□ 0.03
SCUBE2-201ENST00000309263 IGKV6D-41A0A0C4DH26 115 aa15.26■□□□□ 0.03
SCUBE2-201ENST00000309263 ECE1P42892 770 aa15.26■□□□□ 0.03
SCUBE2-201ENST00000309263 NSFP46459 744 aaKnown RBP15.26■□□□□ 0.03
SCUBE2-201ENST00000309263 SOX10P56693 466 aa15.26■□□□□ 0.03
SCUBE2-201ENST00000309263 CDR2Q01850 454 aa15.26■□□□□ 0.03
SCUBE2-201ENST00000309263 BLMHQ13867 455 aa15.26■□□□□ 0.03
SCUBE2-201ENST00000309263 PCNX4Q63HM2 1172 aa15.26■□□□□ 0.03
SCUBE2-201ENST00000309263 CCDC125Q86Z20 511 aa15.26■□□□□ 0.03
SCUBE2-201ENST00000309263 CPXCR1Q8N123 301 aa15.26■□□□□ 0.03
SCUBE2-201ENST00000309263 STK32AQ8WU08 396 aa15.26■□□□□ 0.03
SCUBE2-201ENST00000309263 PIDD1Q9HB75 910 aa15.26■□□□□ 0.03
SCUBE2-201ENST00000309263 NEU2Q9Y3R4 380 aa15.26■□□□□ 0.03
SCUBE2-201ENST00000309263 IPO5O00410 1097 aaKnown RBP15.26■□□□□ 0.03
SCUBE2-201ENST00000309263 SERPINB2P05120 415 aa15.26■□□□□ 0.03
SCUBE2-201ENST00000309263 SIX1Q15475 284 aaPredicted RBP15.26■□□□□ 0.03
SCUBE2-201ENST00000309263 FYB2Q5VWT5 728 aa15.26■□□□□ 0.03
SCUBE2-201ENST00000309263 RFWD3Q6PCD5 774 aa15.26■□□□□ 0.03
SCUBE2-201ENST00000309263 HAUS6Q7Z4H7 955 aa15.26■□□□□ 0.03
SCUBE2-201ENST00000309263 CCDC89Q8N998 374 aa15.26■□□□□ 0.03
SCUBE2-201ENST00000309263 ANKLE1Q8NAG6 615 aa15.26■□□□□ 0.03
SCUBE2-201ENST00000309263 GLIS1Q8NBF1 620 aa15.26■□□□□ 0.03
SCUBE2-201ENST00000309263 GTF3C4Q9UKN8 822 aa15.26■□□□□ 0.03
SCUBE2-201ENST00000309263 IRS2Q9Y4H2 1338 aa15.26■□□□□ 0.03
SCUBE2-201ENST00000309263 LAMB1P07942 1786 aa15.26■□□□□ 0.03
SCUBE2-201ENST00000309263 C2orf71A6NGG8 1288 aa15.26■□□□□ 0.03
SCUBE2-201ENST00000309263 LINGO3P0C6S8 592 aa15.26■□□□□ 0.03
SCUBE2-201ENST00000309263 IL1R1P14778 569 aa15.26■□□□□ 0.03
SCUBE2-201ENST00000309263 KRT4P19013 534 aa15.26■□□□□ 0.03
SCUBE2-201ENST00000309263 RNF220Q5VTB9 566 aa15.26■□□□□ 0.03
SCUBE2-201ENST00000309263 LMO3Q8TAP4 145 aa15.26■□□□□ 0.03
SCUBE2-201ENST00000309263 PLEKHO2Q8TD55 490 aa15.26■□□□□ 0.03
SCUBE2-201ENST00000309263 STMN2Q93045 179 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms