RNA–Protein interactions for RNA: ENST00000308961.4

NDUFA11-201, Transcript of NADH:ubiquinone oxidoreductase subunit A11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFA11, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11-201ENST00000308961 DPP3Q9NY33 737 aa18.47■□□□□ 0.55
NDUFA11-201ENST00000308961 HCSTQ9UBK5 93 aa18.47■□□□□ 0.55
NDUFA11-201ENST00000308961 UBQLN1Q9UMX0 589 aaKnown RBP18.47■□□□□ 0.55
NDUFA11-201ENST00000308961 TBKBP1A7MCY6 615 aa18.46■□□□□ 0.55
NDUFA11-201ENST00000308961 PPEF2O14830 753 aa18.46■□□□□ 0.55
NDUFA11-201ENST00000308961 PMM2O15305 246 aa18.46■□□□□ 0.55
NDUFA11-201ENST00000308961 STX10O60499 249 aa18.46■□□□□ 0.55
NDUFA11-201ENST00000308961 TNNC2P02585 160 aa18.46■□□□□ 0.55
NDUFA11-201ENST00000308961 TMEM191BP0C7N4 346 aa18.46■□□□□ 0.55
NDUFA11-201ENST00000308961 KLK7P49862 253 aa18.46■□□□□ 0.55
NDUFA11-201ENST00000308961 MXI1P50539 228 aa18.46■□□□□ 0.55
NDUFA11-201ENST00000308961 ZNF75DP51815 510 aa18.46■□□□□ 0.55
NDUFA11-201ENST00000308961 AP3M2P53677 418 aa18.46■□□□□ 0.55
NDUFA11-201ENST00000308961 MYL7Q01449 175 aa18.46■□□□□ 0.55
NDUFA11-201ENST00000308961 APBA1Q02410 837 aa18.46■□□□□ 0.55
NDUFA11-201ENST00000308961 UBXN1Q04323 297 aa18.46■□□□□ 0.55
NDUFA11-201ENST00000308961 FILIP1LQ4L180 1135 aa18.46■□□□□ 0.55
NDUFA11-201ENST00000308961 PAN2Q504Q3 1202 aaKnown RBP18.46■□□□□ 0.55
NDUFA11-201ENST00000308961 EPC2Q52LR7 807 aa18.46■□□□□ 0.55
NDUFA11-201ENST00000308961 DPY19L2P1Q6NXN4 242 aa18.46■□□□□ 0.55
NDUFA11-201ENST00000308961 CACTINQ8WUQ7 758 aaKnown RBP18.46■□□□□ 0.55
NDUFA11-201ENST00000308961 RABGGTAQ92696 567 aa18.46■□□□□ 0.55
NDUFA11-201ENST00000308961 ZNF689Q96CS4 500 aaPredicted RBP18.46■□□□□ 0.55
NDUFA11-201ENST00000308961 ANKRD36BP1Q96IX9 119 aa18.46■□□□□ 0.55
NDUFA11-201ENST00000308961 TSPAN18Q96SJ8 248 aa18.46■□□□□ 0.55
NDUFA11-201ENST00000308961 TRIM5Q9C035 493 aa18.46■□□□□ 0.55
NDUFA11-201ENST00000308961 RC3H2Q9HBD1 1191 aaKnown RBP18.46■□□□□ 0.55
NDUFA11-201ENST00000308961 COQ4Q9Y3A0 265 aa18.46■□□□□ 0.55
NDUFA11-201ENST00000308961 PDCD11Q14690 1871 aaKnown RBP18.46■□□□□ 0.54
NDUFA11-201ENST00000308961 HLA-DRAP01903 254 aa18.45■□□□□ 0.54
NDUFA11-201ENST00000308961 ITGB3P05106 788 aa18.45■□□□□ 0.54
NDUFA11-201ENST00000308961 TPM2P07951 284 aa18.45■□□□□ 0.54
NDUFA11-201ENST00000308961 SLC9A1P19634 815 aa18.45■□□□□ 0.54
NDUFA11-201ENST00000308961 PBX1P40424 430 aa18.45■□□□□ 0.54
NDUFA11-201ENST00000308961 GRIK3Q13003 919 aa18.45■□□□□ 0.54
NDUFA11-201ENST00000308961 BIRC3Q13489 604 aa18.45■□□□□ 0.54
NDUFA11-201ENST00000308961 BEST2Q8NFU1 509 aa18.45■□□□□ 0.54
NDUFA11-201ENST00000308961 URGCPQ8TCY9 931 aa18.45■□□□□ 0.54
NDUFA11-201ENST00000308961 PAAF1Q9BRP4 392 aa18.45■□□□□ 0.54
NDUFA11-201ENST00000308961 PI4K2AQ9BTU6 479 aa18.45■□□□□ 0.54
NDUFA11-201ENST00000308961 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.45■□□□□ 0.548e-7■■■■■ 323
NDUFA11-201ENST00000308961 RNF216Q9NWF9 866 aaPredicted RBP18.45■□□□□ 0.54
NDUFA11-201ENST00000308961 SLC4A7Q9Y6M7 1214 aa18.45■□□□□ 0.54
NDUFA11-201ENST00000308961 ANO9A1A5B4 782 aa18.44■□□□□ 0.54
NDUFA11-201ENST00000308961 P4HA2O15460 535 aa18.44■□□□□ 0.54
NDUFA11-201ENST00000308961 HOXA2O43364 376 aa18.44■□□□□ 0.54
NDUFA11-201ENST00000308961 N4BP1O75113 896 aaKnown RBP18.44■□□□□ 0.54
NDUFA11-201ENST00000308961 PHACTR2O75167 634 aa18.44■□□□□ 0.54
NDUFA11-201ENST00000308961 CYP3A5P20815 502 aa18.44■□□□□ 0.54
NDUFA11-201ENST00000308961 POLR2BP30876 1174 aaKnown RBP18.44■□□□□ 0.54
NDUFA11-201ENST00000308961 MRE11P49959 708 aa18.44■□□□□ 0.54
NDUFA11-201ENST00000308961 MYL6P60660 151 aa18.44■□□□□ 0.54
NDUFA11-201ENST00000308961 DSC1Q08554 894 aa18.44■□□□□ 0.54
NDUFA11-201ENST00000308961 SYCP1Q15431 976 aa18.44■□□□□ 0.54
NDUFA11-201ENST00000308961 C9orf57Q5W0N0 161 aa18.44■□□□□ 0.54
NDUFA11-201ENST00000308961 ABI1Q8IZP0 508 aa18.44■□□□□ 0.54
NDUFA11-201ENST00000308961 EHBP1Q8NDI1 1231 aa18.44■□□□□ 0.54
NDUFA11-201ENST00000308961 ERGIC2Q96RQ1 377 aa18.44■□□□□ 0.54
NDUFA11-201ENST00000308961 NRDE2Q9H7Z3 1164 aa18.44■□□□□ 0.54
NDUFA11-201ENST00000308961 DNAJB4Q9UDY4 337 aa18.44■□□□□ 0.54
NDUFA11-201ENST00000308961 AGAP1Q9UPQ3 857 aa18.44■□□□□ 0.54
NDUFA11-201ENST00000308961 SIK3Q9Y2K2 1263 aa18.44■□□□□ 0.54
NDUFA11-201ENST00000308961 MKI67P46013 3256 aaKnown RBP18.43■□□□□ 0.54
NDUFA11-201ENST00000308961 GTPBP10A4D1E9 387 aaKnown RBP18.43■□□□□ 0.54
NDUFA11-201ENST00000308961 CASTOR2A6NHX0 329 aa18.43■□□□□ 0.54
NDUFA11-201ENST00000308961 PIRO00625 290 aa18.43■□□□□ 0.54
NDUFA11-201ENST00000308961 GJB5O95377 273 aa18.43■□□□□ 0.54
NDUFA11-201ENST00000308961 ADCY5O95622 1261 aa18.43■□□□□ 0.54
NDUFA11-201ENST00000308961 KRT19P08727 400 aa18.43■□□□□ 0.54
NDUFA11-201ENST00000308961 PON1P27169 355 aa18.43■□□□□ 0.54
NDUFA11-201ENST00000308961 LRPAP1P30533 357 aa18.43■□□□□ 0.54
NDUFA11-201ENST00000308961 NCOA4Q13772 614 aa18.43■□□□□ 0.54
NDUFA11-201ENST00000308961 FKBP15Q5T1M5 1219 aa18.43■□□□□ 0.54
NDUFA11-201ENST00000308961 FAM109BQ6ICB4 259 aaPredicted RBP18.43■□□□□ 0.54
NDUFA11-201ENST00000308961 CD300LGQ6UXG3 332 aa18.43■□□□□ 0.54
NDUFA11-201ENST00000308961 GBP6Q6ZN66 633 aa18.43■□□□□ 0.54
NDUFA11-201ENST00000308961 HERC6Q8IVU3 1022 aa18.43■□□□□ 0.54
NDUFA11-201ENST00000308961 COLGALT2Q8IYK4 626 aa18.43■□□□□ 0.54
NDUFA11-201ENST00000308961 FBXL13Q8NEE6 735 aa18.43■□□□□ 0.54
NDUFA11-201ENST00000308961 TATDN2Q93075 761 aa18.43■□□□□ 0.54
NDUFA11-201ENST00000308961 UBE2OQ9C0C9 1292 aaKnown RBP18.43■□□□□ 0.54
NDUFA11-201ENST00000308961 INTS2Q9H0H0 1204 aaKnown RBP18.43■□□□□ 0.54
NDUFA11-201ENST00000308961 XYLT2Q9H1B5 865 aa18.43■□□□□ 0.54
NDUFA11-201ENST00000308961 SIX2Q9NPC8 291 aa18.43■□□□□ 0.54
NDUFA11-201ENST00000308961 SLC38A7Q9NVC3 462 aa18.43■□□□□ 0.54
NDUFA11-201ENST00000308961 RAB20Q9NX57 234 aa18.43■□□□□ 0.54
NDUFA11-201ENST00000308961 KANSL3Q9P2N6 904 aa18.43■□□□□ 0.54
NDUFA11-201ENST00000308961 FNDC1Q4ZHG4 1894 aaPredicted RBP18.43■□□□□ 0.54
NDUFA11-201ENST00000308961 GRXCR1A8MXD5 290 aa18.42■□□□□ 0.54
NDUFA11-201ENST00000308961 CBFA2T2O43439 604 aa18.42■□□□□ 0.54
NDUFA11-201ENST00000308961 XPOTO43592 962 aaKnown RBP18.42■□□□□ 0.54
NDUFA11-201ENST00000308961 ATP2A2P16615 1042 aaKnown RBP18.42■□□□□ 0.54
NDUFA11-201ENST00000308961 PIK3CAP42336 1068 aa18.42■□□□□ 0.54
NDUFA11-201ENST00000308961 CLCNKBP51801 687 aa18.42■□□□□ 0.54
NDUFA11-201ENST00000308961 RBP5P82980 135 aa18.42■□□□□ 0.54
NDUFA11-201ENST00000308961 HTRA4P83105 476 aaPredicted RBP18.42■□□□□ 0.54
NDUFA11-201ENST00000308961 TUSC3Q13454 348 aa18.42■□□□□ 0.54
NDUFA11-201ENST00000308961 SPOPLQ6IQ16 392 aa18.42■□□□□ 0.54
NDUFA11-201ENST00000308961 PHOSPHO2Q8TCD6 241 aa18.42■□□□□ 0.54
NDUFA11-201ENST00000308961 SLC9A7Q96T83 725 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms