RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 CCL15Q16663 113 aa16.11■□□□□ 0.17
LEMD3-201ENST00000308330 MFSD14CQ5VZR4 134 aa16.11■□□□□ 0.17
LEMD3-201ENST00000308330 FRA10AC1Q70Z53 315 aa16.11■□□□□ 0.17
LEMD3-201ENST00000308330 GSDMAQ96QA5 445 aa16.11■□□□□ 0.17
LEMD3-201ENST00000308330 AGTPBP1Q9UPW5 1226 aa16.11■□□□□ 0.17
LEMD3-201ENST00000308330 PCDHGA4Q9Y5G9 962 aa16.11■□□□□ 0.17
LEMD3-201ENST00000308330 PGRMC1O00264 195 aaKnown RBP16.11■□□□□ 0.17
LEMD3-201ENST00000308330 XPO1O14980 1071 aaKnown RBP16.11■□□□□ 0.17
LEMD3-201ENST00000308330 MOCS3O95396 460 aa16.11■□□□□ 0.17
LEMD3-201ENST00000308330 TOB2Q14106 344 aaPredicted RBP16.11■□□□□ 0.17
LEMD3-201ENST00000308330 PUS10Q3MIT2 529 aaKnown RBP16.11■□□□□ 0.17
LEMD3-201ENST00000308330 C1QTNF12Q5T7M4 302 aa16.11■□□□□ 0.17
LEMD3-201ENST00000308330 RSBN1Q5VWQ0 802 aaPredicted RBP16.11■□□□□ 0.17
LEMD3-201ENST00000308330 RNPEPL1Q9HAU8 725 aa16.11■□□□□ 0.17
LEMD3-201ENST00000308330 MLXIPLQ9NP71 852 aa16.11■□□□□ 0.17
LEMD3-201ENST00000308330 C12orf4Q9NQ89 552 aa16.11■□□□□ 0.17
LEMD3-201ENST00000308330 ATP1A1P05023 1023 aaKnown RBP16.11■□□□□ 0.17
LEMD3-201ENST00000308330 VAV1P15498 845 aa16.11■□□□□ 0.17
LEMD3-201ENST00000308330 IFRD2Q12894 506 aaPredicted RBP16.11■□□□□ 0.17
LEMD3-201ENST00000308330 PDCD4Q53EL6 469 aaKnown RBP16.11■□□□□ 0.17
LEMD3-201ENST00000308330 KIAA1841Q6NSI8 718 aa16.11■□□□□ 0.17
LEMD3-201ENST00000308330 SCG3Q8WXD2 468 aaKnown RBP16.11■□□□□ 0.17
LEMD3-201ENST00000308330 LPAR1Q92633 364 aa16.11■□□□□ 0.17
LEMD3-201ENST00000308330 PPP2R3CQ969Q6 453 aa16.11■□□□□ 0.17
LEMD3-201ENST00000308330 CEP19Q96LK0 163 aa16.11■□□□□ 0.17
LEMD3-201ENST00000308330 MED10Q9BTT4 135 aa16.11■□□□□ 0.17
LEMD3-201ENST00000308330 NOL6Q9H6R4 1146 aaKnown RBP16.11■□□□□ 0.17
LEMD3-201ENST00000308330 MAGEF1Q9HAY2 307 aa16.11■□□□□ 0.17
LEMD3-201ENST00000308330 CLIC5Q9NZA1 410 aa16.11■□□□□ 0.17
LEMD3-201ENST00000308330 USTQ9Y2C2 406 aa16.11■□□□□ 0.17
LEMD3-201ENST00000308330 ZNF18P17022 549 aa16.1■□□□□ 0.17
LEMD3-201ENST00000308330 ERFP50548 548 aa16.1■□□□□ 0.17
LEMD3-201ENST00000308330 AKR1D1P51857 326 aa16.1■□□□□ 0.17
LEMD3-201ENST00000308330 OSTNP61366 133 aa16.1■□□□□ 0.17
LEMD3-201ENST00000308330 SMYD3Q9H7B4 428 aa16.1■□□□□ 0.17
LEMD3-201ENST00000308330 HESX1Q9UBX0 185 aa16.1■□□□□ 0.17
LEMD3-201ENST00000308330 ITIH6Q6UXX5 1313 aa16.1■□□□□ 0.17
LEMD3-201ENST00000308330 EPHX2P34913 555 aa16.1■□□□□ 0.17
LEMD3-201ENST00000308330 SPARCL1Q14515 664 aa16.1■□□□□ 0.17
LEMD3-201ENST00000308330 TRIP10Q15642 601 aa16.1■□□□□ 0.17
LEMD3-201ENST00000308330 IZUMO2Q6UXV1 221 aa16.1■□□□□ 0.17
LEMD3-201ENST00000308330 CCDC103Q8IW40 242 aa16.1■□□□□ 0.17
LEMD3-201ENST00000308330 RIBC1Q8N443 379 aaPredicted RBP16.1■□□□□ 0.17
LEMD3-201ENST00000308330 OSCP1Q8WVF1 389 aa16.1■□□□□ 0.17
LEMD3-201ENST00000308330 RFX7Q2KHR2 1363 aa16.1■□□□□ 0.17
LEMD3-201ENST00000308330 K7ERI5 159 aa16.1■□□□□ 0.17
LEMD3-201ENST00000308330 COPB1P53618 953 aaKnown RBP16.1■□□□□ 0.17
LEMD3-201ENST00000308330 RIPK1Q13546 671 aa16.1■□□□□ 0.17
LEMD3-201ENST00000308330 MORC3Q14149 939 aa16.1■□□□□ 0.17
LEMD3-201ENST00000308330 FAM9CQ8IZT9 166 aa16.1■□□□□ 0.17
LEMD3-201ENST00000308330 DHTKD1Q96HY7 919 aaPredicted RBP16.1■□□□□ 0.17
LEMD3-201ENST00000308330 SERPINI1Q99574 410 aa16.1■□□□□ 0.17
LEMD3-201ENST00000308330 STK17AQ9UEE5 414 aa16.1■□□□□ 0.17
LEMD3-201ENST00000308330 STRIP2Q9ULQ0 834 aa16.1■□□□□ 0.17
LEMD3-201ENST00000308330 SYNPO2Q9UMS6 1093 aa16.1■□□□□ 0.17
LEMD3-201ENST00000308330 NR2F2P24468 414 aa16.1■□□□□ 0.17
LEMD3-201ENST00000308330 PDAP1Q13442 181 aaKnown RBP16.1■□□□□ 0.17
LEMD3-201ENST00000308330 SBK1Q52WX2 424 aa16.1■□□□□ 0.17
LEMD3-201ENST00000308330 WASHC2DQ5SRD0 308 aa16.1■□□□□ 0.17
LEMD3-201ENST00000308330 U2AF1L4Q8WU68 220 aaKnown RBP16.1■□□□□ 0.17
LEMD3-201ENST00000308330 KAZALD1Q96I82 304 aa16.1■□□□□ 0.17
LEMD3-201ENST00000308330 TRIM39Q9HCM9 518 aa16.1■□□□□ 0.17
LEMD3-201ENST00000308330 SH3GLB2Q9NR46 395 aa16.1■□□□□ 0.17
LEMD3-201ENST00000308330 ADARB2Q9NS39 739 aaKnown RBP16.1■□□□□ 0.17
LEMD3-201ENST00000308330 TPPPO94811 219 aa16.09■□□□□ 0.17
LEMD3-201ENST00000308330 PLA2G4BP0C869 781 aa16.09■□□□□ 0.17
LEMD3-201ENST00000308330 GAP43P17677 238 aa16.09■□□□□ 0.17
LEMD3-201ENST00000308330 XRCC4Q13426 336 aa16.09■□□□□ 0.17
LEMD3-201ENST00000308330 RGS21Q2M5E4 152 aa16.09■□□□□ 0.17
LEMD3-201ENST00000308330 LRRC34Q8IZ02 419 aa16.09■□□□□ 0.17
LEMD3-201ENST00000308330 RNPEPQ9H4A4 650 aa16.09■□□□□ 0.17
LEMD3-201ENST00000308330 WDR70Q9NW82 654 aa16.09■□□□□ 0.17
LEMD3-201ENST00000308330 TLR3O15455 904 aaKnown RBP16.09■□□□□ 0.17
LEMD3-201ENST00000308330 ADCY6O43306 1168 aa16.09■□□□□ 0.17
LEMD3-201ENST00000308330 CDC27P30260 824 aa16.09■□□□□ 0.17
LEMD3-201ENST00000308330 CATSPER4Q7RTX7 472 aa16.09■□□□□ 0.17
LEMD3-201ENST00000308330 USP32Q8NFA0 1604 aa16.09■□□□□ 0.17
LEMD3-201ENST00000308330 WDR64B1ANS9 1081 aa16.09■□□□□ 0.17
LEMD3-201ENST00000308330 RASSF9O75901 435 aa16.09■□□□□ 0.17
LEMD3-201ENST00000308330 EEF1GP26641 437 aaKnown RBP16.09■□□□□ 0.17
LEMD3-201ENST00000308330 IST1P53990 364 aa16.09■□□□□ 0.17
LEMD3-201ENST00000308330 NFIAQ12857 509 aa16.09■□□□□ 0.17
LEMD3-201ENST00000308330 EIF2B5Q13144 721 aaKnown RBP16.09■□□□□ 0.17
LEMD3-201ENST00000308330 MTF1Q14872 753 aa16.09■□□□□ 0.17
LEMD3-201ENST00000308330 RSPH1Q8WYR4 309 aa16.09■□□□□ 0.17
LEMD3-201ENST00000308330 PARVGQ9HBI0 331 aa16.09■□□□□ 0.17
LEMD3-201ENST00000308330 TBC1D22BQ9NU19 505 aa16.09■□□□□ 0.17
LEMD3-201ENST00000308330 TYW1Q9NV66 732 aaKnown RBP16.09■□□□□ 0.17
LEMD3-201ENST00000308330 MAD1L1Q9Y6D9 718 aa16.09■□□□□ 0.17
LEMD3-201ENST00000308330 RICTORQ6R327 1708 aa16.09■□□□□ 0.17
LEMD3-201ENST00000308330 B3GALNT1O75752 331 aa16.09■□□□□ 0.17
LEMD3-201ENST00000308330 TFAMQ00059 246 aaKnown RBP16.09■□□□□ 0.17
LEMD3-201ENST00000308330 TMTC4Q5T4D3 741 aa16.09■□□□□ 0.17
LEMD3-201ENST00000308330 C3orf67Q6ZVT6 689 aa16.09■□□□□ 0.17
LEMD3-201ENST00000308330 LSM14BQ9BX40 385 aaKnown RBP16.09■□□□□ 0.17
LEMD3-201ENST00000308330 TBK1Q9UHD2 729 aa16.09■□□□□ 0.17
LEMD3-201ENST00000308330 PLCG1P19174 1290 aa16.08■□□□□ 0.17
LEMD3-201ENST00000308330 COPB2P35606 906 aa16.08■□□□□ 0.17
LEMD3-201ENST00000308330 EPHB1P54762 984 aa16.08■□□□□ 0.17
LEMD3-201ENST00000308330 POTEAQ6S8J7 498 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms