RNA–Protein interactions for RNA: ENST00000304060.9

ZNF440-201, Transcript of zinc finger protein 440, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF440, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-201ENST00000304060 PYGBP11216 843 aa6.4□□□□□ -1.39
ZNF440-201ENST00000304060 DRD1P21728 446 aa6.4□□□□□ -1.39
ZNF440-201ENST00000304060 GUCY2CP25092 1073 aa6.4□□□□□ -1.39
ZNF440-201ENST00000304060 DDX6P26196 483 aaKnown RBP eCLIP6.4□□□□□ -1.39
ZNF440-201ENST00000304060 DGKEP52429 567 aa6.4□□□□□ -1.39
ZNF440-201ENST00000304060 PRPF4BQ13523 1007 aaKnown RBP6.4□□□□□ -1.39
ZNF440-201ENST00000304060 EMC2Q15006 297 aa6.4□□□□□ -1.39
ZNF440-201ENST00000304060 BTBD8Q5XKL5 378 aa6.4□□□□□ -1.39
ZNF440-201ENST00000304060 SLC36A4Q6YBV0 504 aa6.4□□□□□ -1.39
ZNF440-201ENST00000304060 AVENQ9NQS1 362 aaPredicted RBP6.4□□□□□ -1.39
ZNF440-201ENST00000304060 PRMT8Q9NR22 394 aaPredicted RBP6.4□□□□□ -1.39
ZNF440-201ENST00000304060 OBP2AQ9NY56 170 aa6.4□□□□□ -1.39
ZNF440-201ENST00000304060 NPTXRO95502 500 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 TARSP26639 723 aaKnown RBP6.39□□□□□ -1.39
ZNF440-201ENST00000304060 MLH1P40692 756 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 SMARCB1Q12824 385 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 KLHL40Q2TBA0 621 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 BLOC1S2Q6QNY1 142 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 MOXD1Q6UVY6 613 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 GPIHBP1Q8IV16 184 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 IQUBQ8NA54 791 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 ING5Q8WYH8 240 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 TACO1Q9BSH4 297 aaKnown RBP6.39□□□□□ -1.39
ZNF440-201ENST00000304060 SH3GLB2Q9NR46 395 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 ANKEF1Q9NU02 776 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 NEUROG3Q9Y4Z2 214 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 PCDHB15Q9Y5E8 787 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 PARP14Q460N5 1801 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 IGKV6D-21A0A0A0MT36 114 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 RHOP08100 348 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 CCDC172P0C7W6 258 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 CCNE1P24864 410 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 MSNP26038 577 aaKnown RBP6.39□□□□□ -1.39
ZNF440-201ENST00000304060 HOXA6P31267 233 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 SMTNP53814 917 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 PRDM16Q9HAZ2 1276 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 HEBP1Q9NRV9 189 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 CHD8Q9HCK8 2581 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 CCDC189A1A4V9 331 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 SH2B2O14492 632 aaPredicted RBP6.39□□□□□ -1.39
ZNF440-201ENST00000304060 FGFR4P22455 802 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 FECHP22830 423 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 RPL9P32969 192 aaKnown RBP6.39□□□□□ -1.39
ZNF440-201ENST00000304060 MTAPQ13126 283 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 HAUS3Q68CZ6 603 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 NCAPH2Q6IBW4 605 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 DHX32Q7L7V1 743 aaKnown RBP6.39□□□□□ -1.39
ZNF440-201ENST00000304060 DCP1BQ8IZD4 617 aaKnown RBP6.39□□□□□ -1.39
ZNF440-201ENST00000304060 FSIP1Q8NA03 581 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 CCDC47Q96A33 483 aaKnown RBP6.39□□□□□ -1.39
ZNF440-201ENST00000304060 ATXN3LQ9H3M9 355 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 DDX25Q9UHL0 483 aaKnown RBP6.39□□□□□ -1.39
ZNF440-201ENST00000304060 MYMKA6NI61 221 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 OR6C75A6NL08 312 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.39□□□□□ -1.39
ZNF440-201ENST00000304060 SPTBN2O15020 2390 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 TBX3O15119 743 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 NDUFS2O75306 463 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 CFIP05156 583 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 PMLP29590 882 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 FOSBP53539 338 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 TSGA10IPQ3SY00 556 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 BROXQ5VW32 411 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 PARM1Q6UWI2 310 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 BPIFB1Q8TDL5 484 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 PRPF31Q8WWY3 499 aaKnown RBP6.39□□□□□ -1.39
ZNF440-201ENST00000304060 PIGKQ92643 395 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 COL26A1Q96A83 441 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 CCDC39Q9UFE4 941 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 ZMIZ1Q9ULJ6 1067 aa6.39□□□□□ -1.39
ZNF440-201ENST00000304060 GOLGA6L4A6NEF3 574 aa6.38□□□□□ -1.39
ZNF440-201ENST00000304060 MCM2P49736 904 aa6.38□□□□□ -1.39
ZNF440-201ENST00000304060 CYB5R4Q7L1T6 521 aa6.38□□□□□ -1.39
ZNF440-201ENST00000304060 MFSD6LQ8IWD5 586 aa6.38□□□□□ -1.39
ZNF440-201ENST00000304060 FAM160A2Q8N612 972 aaPredicted RBP6.38□□□□□ -1.39
ZNF440-201ENST00000304060 GLIS3Q8NEA6 775 aa6.38□□□□□ -1.39
ZNF440-201ENST00000304060 BAP1Q92560 729 aa6.38□□□□□ -1.39
ZNF440-201ENST00000304060 CDK5RAP3Q96JB5 506 aa6.38□□□□□ -1.39
ZNF440-201ENST00000304060 TMEM209Q96SK2 561 aa6.38□□□□□ -1.39
ZNF440-201ENST00000304060 PCYT2Q99447 389 aa6.38□□□□□ -1.39
ZNF440-201ENST00000304060 SLC26A6Q9BXS9 759 aa6.38□□□□□ -1.39
ZNF440-201ENST00000304060 AFF4Q9UHB7 1163 aaKnown RBP6.38□□□□□ -1.39
ZNF440-201ENST00000304060 MYO10Q9HD67 2058 aa6.38□□□□□ -1.39
ZNF440-201ENST00000304060 ARL5CA6NH57 179 aa6.38□□□□□ -1.39
ZNF440-201ENST00000304060 SHISA7A6NL88 538 aa6.38□□□□□ -1.39
ZNF440-201ENST00000304060 PPP1R11O60927 126 aaPredicted RBP6.38□□□□□ -1.39
ZNF440-201ENST00000304060 PAPSS2O95340 614 aaPredicted RBP6.38□□□□□ -1.39
ZNF440-201ENST00000304060 TSPY1Q01534 308 aa6.38□□□□□ -1.39
ZNF440-201ENST00000304060 LAMTOR4Q0VGL1 99 aa6.38□□□□□ -1.39
ZNF440-201ENST00000304060 WDR45BQ5MNZ6 344 aa6.38□□□□□ -1.39
ZNF440-201ENST00000304060 EOGTQ5NDL2 527 aa6.38□□□□□ -1.39
ZNF440-201ENST00000304060 TPH2Q8IWU9 490 aa6.38□□□□□ -1.39
ZNF440-201ENST00000304060 NPAS3Q8IXF0 933 aa6.38□□□□□ -1.39
ZNF440-201ENST00000304060 BICD1Q96G01 975 aa6.38□□□□□ -1.39
ZNF440-201ENST00000304060 DDX23Q9BUQ8 820 aaKnown RBP6.38□□□□□ -1.39
ZNF440-201ENST00000304060 OSBPL3Q9H4L5 887 aa6.38□□□□□ -1.39
ZNF440-201ENST00000304060 PLSCR2Q9NRY7 297 aa6.38□□□□□ -1.39
ZNF440-201ENST00000304060 DSEQ9UL01 958 aa6.38□□□□□ -1.39
ZNF440-201ENST00000304060 HEMK1Q9Y5R4 338 aaPredicted RBP6.38□□□□□ -1.39
ZNF440-201ENST00000304060 GREB1LQ9C091 1923 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms