RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 TRIM11Q96F44 468 aa12.84□□□□□ -0.35
PDGFD-201ENST00000302251 DDX50Q9BQ39 737 aaKnown RBP12.84□□□□□ -0.35
PDGFD-201ENST00000302251 CBWD1Q9BRT8 395 aa12.84□□□□□ -0.35
PDGFD-201ENST00000302251 HSPBP1Q9NZL4 362 aa12.84□□□□□ -0.35
PDGFD-201ENST00000302251 CHMP2BQ9UQN3 213 aa12.84□□□□□ -0.35
PDGFD-201ENST00000302251 MX2P20592 715 aa12.84□□□□□ -0.35
PDGFD-201ENST00000302251 AP2B1P63010 937 aa12.84□□□□□ -0.35
PDGFD-201ENST00000302251 XRCC4Q13426 336 aa12.84□□□□□ -0.35
PDGFD-201ENST00000302251 PPP6R3Q5H9R7 873 aaPredicted RBP12.84□□□□□ -0.35
PDGFD-201ENST00000302251 DAB2IPQ5VWQ8 1189 aa12.84□□□□□ -0.35
PDGFD-201ENST00000302251 PCGF5Q86SE9 256 aa12.84□□□□□ -0.35
PDGFD-201ENST00000302251 FBXL13Q8NEE6 735 aa12.84□□□□□ -0.35
PDGFD-201ENST00000302251 VTI1AQ96AJ9 217 aa12.84□□□□□ -0.35
PDGFD-201ENST00000302251 CDCA7Q9BWT1 371 aaPredicted RBP12.84□□□□□ -0.35
PDGFD-201ENST00000302251 CHST7Q9NS84 486 aa12.84□□□□□ -0.35
PDGFD-201ENST00000302251 PI4KBQ9UBF8 816 aa12.84□□□□□ -0.35
PDGFD-201ENST00000302251 ZNF711Q9Y462 761 aa12.84□□□□□ -0.35
PDGFD-201ENST00000302251 COL4A1P02462 1669 aa12.84□□□□□ -0.35
PDGFD-201ENST00000302251 NOL4O94818 638 aa12.84□□□□□ -0.35
PDGFD-201ENST00000302251 HOXA7P31268 230 aaPredicted RBP12.84□□□□□ -0.35
PDGFD-201ENST00000302251 PRKG1Q13976 671 aa12.84□□□□□ -0.35
PDGFD-201ENST00000302251 SEPT6Q14141 434 aa12.84□□□□□ -0.35
PDGFD-201ENST00000302251 SF3B3Q15393 1217 aaKnown RBP12.84□□□□□ -0.35
PDGFD-201ENST00000302251 SMTNL2Q2TAL5 461 aa12.84□□□□□ -0.35
PDGFD-201ENST00000302251 CYFIP1Q7L576 1253 aa12.84□□□□□ -0.35
PDGFD-201ENST00000302251 MTBPQ96DY7 904 aa12.84□□□□□ -0.35
PDGFD-201ENST00000302251 MKNK1Q9BUB5 465 aa12.84□□□□□ -0.35
PDGFD-201ENST00000302251 RHBDL2Q9NX52 303 aa12.84□□□□□ -0.35
PDGFD-201ENST00000302251 SUGT1Q9Y2Z0 365 aa12.84□□□□□ -0.35
PDGFD-201ENST00000302251 NOL3O60936 208 aaKnown RBP12.83□□□□□ -0.35
PDGFD-201ENST00000302251 TMEM191BP0C7N4 346 aa12.83□□□□□ -0.35
PDGFD-201ENST00000302251 VHLP40337 213 aa12.83□□□□□ -0.35
PDGFD-201ENST00000302251 CBWD6Q4V339 395 aa12.83□□□□□ -0.35
PDGFD-201ENST00000302251 CBWD3Q5JTY5 395 aa12.83□□□□□ -0.35
PDGFD-201ENST00000302251 CBWD5Q5RIA9 395 aa12.83□□□□□ -0.35
PDGFD-201ENST00000302251 SNX30Q5VWJ9 437 aa12.83□□□□□ -0.35
PDGFD-201ENST00000302251 OLFML2BQ68BL8 750 aa12.83□□□□□ -0.35
PDGFD-201ENST00000302251 C16orf86Q6ZW13 317 aa12.83□□□□□ -0.35
PDGFD-201ENST00000302251 SCYL1Q96KG9 808 aa12.83□□□□□ -0.35
PDGFD-201ENST00000302251 RPS6KC1Q96S38 1066 aa12.83□□□□□ -0.35
PDGFD-201ENST00000302251 TISP43B9A030 160 aa12.83□□□□□ -0.36
PDGFD-201ENST00000302251 SLC16A3O15427 465 aaKnown RBP12.83□□□□□ -0.36
PDGFD-201ENST00000302251 ATP9AO75110 1047 aa12.83□□□□□ -0.36
PDGFD-201ENST00000302251 KRT37O76014 449 aa12.83□□□□□ -0.36
PDGFD-201ENST00000302251 SNUPNO95149 360 aaKnown RBP12.83□□□□□ -0.36
PDGFD-201ENST00000302251 MAP3K6O95382 1288 aa12.83□□□□□ -0.36
PDGFD-201ENST00000302251 ATP6V1B1P15313 513 aa12.83□□□□□ -0.36
PDGFD-201ENST00000302251 POLR2BP30876 1174 aaKnown RBP12.83□□□□□ -0.36
PDGFD-201ENST00000302251 FNTAP49354 379 aa12.83□□□□□ -0.36
PDGFD-201ENST00000302251 GPSM2P81274 684 aa12.83□□□□□ -0.36
PDGFD-201ENST00000302251 PPP1R18Q6NYC8 613 aa12.83□□□□□ -0.36
PDGFD-201ENST00000302251 ARID3BQ8IVW6 561 aaPredicted RBP12.83□□□□□ -0.36
PDGFD-201ENST00000302251 WDR75Q8IWA0 830 aaKnown RBP12.83□□□□□ -0.36
PDGFD-201ENST00000302251 TRIML2Q8N7C3 387 aa12.83□□□□□ -0.36
PDGFD-201ENST00000302251 SNRNP27Q8WVK2 155 aaKnown RBP12.83□□□□□ -0.36
PDGFD-201ENST00000302251 DNAJC19Q96DA6 116 aa12.83□□□□□ -0.36
PDGFD-201ENST00000302251 Q9H521 79 aa12.83□□□□□ -0.36
PDGFD-201ENST00000302251 ARMCX1Q9P291 453 aa12.83□□□□□ -0.36
PDGFD-201ENST00000302251 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.83□□□□□ -0.36
PDGFD-201ENST00000302251 EME2A4GXA9 379 aaPredicted RBP12.83□□□□□ -0.36
PDGFD-201ENST00000302251 PIK3R2O00459 728 aa12.83□□□□□ -0.36
PDGFD-201ENST00000302251 NCALDP61601 193 aa12.83□□□□□ -0.36
PDGFD-201ENST00000302251 RNF168Q8IYW5 571 aaPredicted RBP12.83□□□□□ -0.36
PDGFD-201ENST00000302251 TEX9Q8N6V9 391 aa12.83□□□□□ -0.36
PDGFD-201ENST00000302251 PRELID2Q8N945 189 aa12.83□□□□□ -0.36
PDGFD-201ENST00000302251 TTC25Q96NG3 672 aa12.83□□□□□ -0.36
PDGFD-201ENST00000302251 FAM111AQ96PZ2 611 aa12.83□□□□□ -0.36
PDGFD-201ENST00000302251 TDRD3Q9H7E2 651 aaKnown RBP12.83□□□□□ -0.36
PDGFD-201ENST00000302251 NGRNQ9NPE2 291 aaKnown RBP12.83□□□□□ -0.36
PDGFD-201ENST00000302251 SERPINB2P05120 415 aa12.83□□□□□ -0.36
PDGFD-201ENST00000302251 GNA15P30679 374 aa12.83□□□□□ -0.36
PDGFD-201ENST00000302251 ACOT2P49753 483 aa12.83□□□□□ -0.36
PDGFD-201ENST00000302251 DBN1Q16643 649 aa12.83□□□□□ -0.36
PDGFD-201ENST00000302251 BTNL9Q6UXG8 535 aa12.83□□□□□ -0.36
PDGFD-201ENST00000302251 RBM46Q8TBY0 533 aaKnown RBP12.83□□□□□ -0.36
PDGFD-201ENST00000302251 PRPF31Q8WWY3 499 aaKnown RBP12.83□□□□□ -0.36
PDGFD-201ENST00000302251 ARHGEF1Q92888 912 aaKnown RBP12.83□□□□□ -0.36
PDGFD-201ENST00000302251 MAGEB18Q96M61 343 aa12.83□□□□□ -0.36
PDGFD-201ENST00000302251 TRIM56Q9BRZ2 755 aaKnown RBP12.83□□□□□ -0.36
PDGFD-201ENST00000302251 INPP5FQ9Y2H2 1132 aa12.83□□□□□ -0.36
PDGFD-201ENST00000302251 COL22A1Q8NFW1 1626 aaPredicted RBP12.82□□□□□ -0.36
PDGFD-201ENST00000302251 MSH4O15457 936 aa12.82□□□□□ -0.36
PDGFD-201ENST00000302251 RRM1P23921 792 aa12.82□□□□□ -0.36
PDGFD-201ENST00000302251 ASPHQ12797 758 aa12.82□□□□□ -0.36
PDGFD-201ENST00000302251 EPHA7Q15375 998 aa12.82□□□□□ -0.36
PDGFD-201ENST00000302251 TRIP10Q15642 601 aa12.82□□□□□ -0.36
PDGFD-201ENST00000302251 HSP90AA5PQ58FG0 334 aa12.82□□□□□ -0.36
PDGFD-201ENST00000302251 ATP11CQ8NB49 1132 aa12.82□□□□□ -0.36
PDGFD-201ENST00000302251 ATXN7L3BQ96GX2 97 aa12.82□□□□□ -0.36
PDGFD-201ENST00000302251 APOL6Q9BWW8 343 aa12.82□□□□□ -0.36
PDGFD-201ENST00000302251 GPRC5CQ9NQ84 441 aa12.82□□□□□ -0.36
PDGFD-201ENST00000302251 SMG5Q9UPR3 1016 aaKnown RBP12.82□□□□□ -0.36
PDGFD-201ENST00000302251 APOBEC2Q9Y235 224 aaKnown RBP12.82□□□□□ -0.36
PDGFD-201ENST00000302251 DAGLAQ9Y4D2 1042 aa12.82□□□□□ -0.36
PDGFD-201ENST00000302251 LRP5O75197 1615 aa12.82□□□□□ -0.36
PDGFD-201ENST00000302251 NPEPPSP55786 919 aa12.82□□□□□ -0.36
PDGFD-201ENST00000302251 MMEL1Q495T6 779 aa12.82□□□□□ -0.36
PDGFD-201ENST00000302251 TNS2Q63HR2 1409 aa12.82□□□□□ -0.36
PDGFD-201ENST00000302251 ATG16L1Q676U5 607 aa12.82□□□□□ -0.36
PDGFD-201ENST00000302251 NME8Q8N427 588 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms