RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 LAMB2P55268 1798 aa15.63■□□□□ 0.09
CCNF-201ENST00000293968 FSCN2O14926 492 aa15.62■□□□□ 0.09
CCNF-201ENST00000293968 LUC7L3O95232 432 aaKnown RBP15.62■□□□□ 0.09
CCNF-201ENST00000293968 HADHBP55084 474 aaKnown RBP15.62■□□□□ 0.09
CCNF-201ENST00000293968 MXRA7P84157 204 aa15.62■□□□□ 0.09
CCNF-201ENST00000293968 STAT4Q14765 748 aa15.62■□□□□ 0.09
CCNF-201ENST00000293968 PKN2Q16513 984 aaKnown RBP15.62■□□□□ 0.09
CCNF-201ENST00000293968 CFAP57Q96MR6 1250 aa15.62■□□□□ 0.09
CCNF-201ENST00000293968 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.62■□□□□ 0.09
CCNF-201ENST00000293968 UBN1Q9NPG3 1134 aa15.62■□□□□ 0.09
CCNF-201ENST00000293968 SLC5A4Q9NY91 659 aa15.62■□□□□ 0.09
CCNF-201ENST00000293968 COL14A1Q05707 1796 aaKnown RBP15.62■□□□□ 0.09
CCNF-201ENST00000293968 SOX10P56693 466 aa15.62■□□□□ 0.09
CCNF-201ENST00000293968 JAG1P78504 1218 aa15.62■□□□□ 0.09
CCNF-201ENST00000293968 CGB2Q6NT52 195 aa15.62■□□□□ 0.09
CCNF-201ENST00000293968 MAB21L3Q8N8X9 362 aa15.62■□□□□ 0.09
CCNF-201ENST00000293968 VTI1AQ96AJ9 217 aa15.62■□□□□ 0.09
CCNF-201ENST00000293968 FBXO28Q9NVF7 368 aa15.62■□□□□ 0.09
CCNF-201ENST00000293968 A0A0G2JND7 137 aa15.62■□□□□ 0.09
CCNF-201ENST00000293968 CYP3A4P08684 503 aa15.62■□□□□ 0.09
CCNF-201ENST00000293968 ETS1P14921 441 aa15.62■□□□□ 0.09
CCNF-201ENST00000293968 TNNI1P19237 187 aa15.62■□□□□ 0.09
CCNF-201ENST00000293968 GPS1Q13098 491 aa15.62■□□□□ 0.09
CCNF-201ENST00000293968 PTK6Q13882 451 aa15.62■□□□□ 0.09
CCNF-201ENST00000293968 FBXL13Q8NEE6 735 aa15.62■□□□□ 0.09
CCNF-201ENST00000293968 C1orf112Q9NSG2 853 aa15.62■□□□□ 0.09
CCNF-201ENST00000293968 SPATS2LQ9NUQ6 558 aaKnown RBP15.62■□□□□ 0.09
CCNF-201ENST00000293968 FAM198AQ9UFP1 575 aa15.62■□□□□ 0.09
CCNF-201ENST00000293968 ZMYND8Q9ULU4 1186 aaPredicted RBP15.62■□□□□ 0.09
CCNF-201ENST00000293968 USH1CQ9Y6N9 552 aa15.62■□□□□ 0.09
CCNF-201ENST00000293968 ENTPD5O75356 428 aa15.61■□□□□ 0.09
CCNF-201ENST00000293968 POLGP54098 1239 aaPredicted RBP15.61■□□□□ 0.09
CCNF-201ENST00000293968 WDR4P57081 412 aaKnown RBP15.61■□□□□ 0.09
CCNF-201ENST00000293968 DYNLT1P63172 113 aa15.61■□□□□ 0.09
CCNF-201ENST00000293968 FYB2Q5VWT5 728 aa15.61■□□□□ 0.09
CCNF-201ENST00000293968 HHIPL2Q6UWX4 724 aa15.61■□□□□ 0.09
CCNF-201ENST00000293968 RFX8Q6ZV50 586 aa15.61■□□□□ 0.09
CCNF-201ENST00000293968 TTC8Q8TAM2 541 aa15.61■□□□□ 0.09
CCNF-201ENST00000293968 ZBTB10Q96DT7 871 aa15.61■□□□□ 0.09
CCNF-201ENST00000293968 OSBPL8Q9BZF1 889 aa15.61■□□□□ 0.09
CCNF-201ENST00000293968 RAB20Q9NX57 234 aa15.61■□□□□ 0.09
CCNF-201ENST00000293968 ZFP69BQ9UJL9 534 aa15.61■□□□□ 0.09
CCNF-201ENST00000293968 USP20Q9Y2K6 914 aa15.61■□□□□ 0.09
CCNF-201ENST00000293968 NEU2Q9Y3R4 380 aa15.61■□□□□ 0.09
CCNF-201ENST00000293968 ZHX2Q9Y6X8 837 aa15.61■□□□□ 0.09
CCNF-201ENST00000293968 GYS1P13807 737 aa15.61■□□□□ 0.09
CCNF-201ENST00000293968 NOP14P78316 857 aaKnown RBP15.61■□□□□ 0.09
CCNF-201ENST00000293968 CAV1Q03135 178 aa15.61■□□□□ 0.09
CCNF-201ENST00000293968 LIN9Q5TKA1 542 aa15.61■□□□□ 0.09
CCNF-201ENST00000293968 SH3BP5LQ7L8J4 393 aa15.61■□□□□ 0.09
CCNF-201ENST00000293968 PSPC1Q8WXF1 523 aaKnown RBP15.61■□□□□ 0.09
CCNF-201ENST00000293968 MRPL11Q9Y3B7 192 aaKnown RBP15.61■□□□□ 0.09
CCNF-201ENST00000293968 CLRN2A0PK11 232 aa15.61■□□□□ 0.09
CCNF-201ENST00000293968 HNRNPDLO14979 420 aaKnown RBP15.61■□□□□ 0.09
CCNF-201ENST00000293968 SARNPP82979 210 aaKnown RBP15.61■□□□□ 0.09
CCNF-201ENST00000293968 NFIL3Q16649 462 aa15.61■□□□□ 0.09
CCNF-201ENST00000293968 PCNX4Q63HM2 1172 aa15.61■□□□□ 0.09
CCNF-201ENST00000293968 GRAMD1AQ96CP6 724 aa15.61■□□□□ 0.09
CCNF-201ENST00000293968 BANF1O75531 89 aa15.61■□□□□ 0.09
CCNF-201ENST00000293968 POTEJP0CG39 1038 aa15.61■□□□□ 0.09
CCNF-201ENST00000293968 RPA3P35244 121 aaPredicted RBP15.61■□□□□ 0.09
CCNF-201ENST00000293968 ARSEP51690 589 aa15.61■□□□□ 0.09
CCNF-201ENST00000293968 TSNAXIP1Q2TAA8 658 aa15.61■□□□□ 0.09
CCNF-201ENST00000293968 ATP13A4Q4VNC1 1196 aa15.61■□□□□ 0.09
CCNF-201ENST00000293968 TAF1BQ53T94 588 aaPredicted RBP15.61■□□□□ 0.09
CCNF-201ENST00000293968 FAM213AQ9BRX8 229 aa15.61■□□□□ 0.09
CCNF-201ENST00000293968 DENND3A2RUS2 1198 aa15.6■□□□□ 0.09
CCNF-201ENST00000293968 SMIM24O75264 130 aa15.6■□□□□ 0.09
CCNF-201ENST00000293968 WDR44Q5JSH3 913 aa15.6■□□□□ 0.09
CCNF-201ENST00000293968 RNF43Q68DV7 783 aa15.6■□□□□ 0.09
CCNF-201ENST00000293968 SP8Q8IXZ3 490 aa15.6■□□□□ 0.09
CCNF-201ENST00000293968 BBOF1Q8ND07 529 aa15.6■□□□□ 0.09
CCNF-201ENST00000293968 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.6■□□□□ 0.09
CCNF-201ENST00000293968 SHC3Q92529 594 aa15.6■□□□□ 0.09
CCNF-201ENST00000293968 GMCL1Q96IK5 515 aa15.6■□□□□ 0.09
CCNF-201ENST00000293968 CFAP69A5D8W1 941 aa15.6■□□□□ 0.09
CCNF-201ENST00000293968 SGK1O00141 431 aa15.6■□□□□ 0.09
CCNF-201ENST00000293968 HARSP12081 509 aaKnown RBP15.6■□□□□ 0.09
CCNF-201ENST00000293968 FASTKD3Q14CZ7 662 aaKnown RBP15.6■□□□□ 0.09
CCNF-201ENST00000293968 CRY2Q49AN0 593 aa15.6■□□□□ 0.09
CCNF-201ENST00000293968 C1orf220Q5T0J3 134 aa15.6■□□□□ 0.09
CCNF-201ENST00000293968 APBB1IPQ7Z5R6 666 aaPredicted RBP15.6■□□□□ 0.09
CCNF-201ENST00000293968 SLC9A9Q8IVB4 645 aa15.6■□□□□ 0.09
CCNF-201ENST00000293968 KCNH7Q9NS40 1196 aa15.6■□□□□ 0.09
CCNF-201ENST00000293968 CHKBQ9Y259 395 aa15.6■□□□□ 0.09
CCNF-201ENST00000293968 PPP1R12AO14974 1030 aaPredicted RBP15.6■□□□□ 0.09
CCNF-201ENST00000293968 ATP2A1O14983 1001 aa15.6■□□□□ 0.09
CCNF-201ENST00000293968 P4HA2O15460 535 aa15.6■□□□□ 0.09
CCNF-201ENST00000293968 DCTN3O75935 186 aa15.6■□□□□ 0.09
CCNF-201ENST00000293968 P4HBP07237 508 aaKnown RBP15.6■□□□□ 0.09
CCNF-201ENST00000293968 YWHABP31946 246 aaKnown RBP15.6■□□□□ 0.09
CCNF-201ENST00000293968 RASSF2P50749 326 aa15.6■□□□□ 0.09
CCNF-201ENST00000293968 PDIA2Q13087 525 aaKnown RBP15.6■□□□□ 0.09
CCNF-201ENST00000293968 CLEC16AQ2KHT3 1053 aa15.6■□□□□ 0.09
CCNF-201ENST00000293968 TNFAIP8L3Q5GJ75 292 aa15.6■□□□□ 0.09
CCNF-201ENST00000293968 FNBP1Q96RU3 617 aa15.6■□□□□ 0.09
CCNF-201ENST00000293968 TBC1D10AQ9BXI6 508 aa15.6■□□□□ 0.09
CCNF-201ENST00000293968 C12orf65Q9H3J6 166 aaKnown RBP15.6■□□□□ 0.09
CCNF-201ENST00000293968 KCND2Q9NZV8 630 aa15.6■□□□□ 0.09
CCNF-201ENST00000293968 EXOC7Q9UPT5 735 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms