RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 DARS2Q6PI48 645 aaKnown RBP13.28□□□□□ -0.28
SLC6A1-201ENST00000287766 ARHGAP18Q8N392 663 aa13.28□□□□□ -0.28
SLC6A1-201ENST00000287766 ARHGEF26Q96DR7 871 aa13.28□□□□□ -0.28
SLC6A1-201ENST00000287766 XPO6Q96QU8 1125 aaKnown RBP13.28□□□□□ -0.28
SLC6A1-201ENST00000287766 BCAS3Q9H6U6 928 aa13.28□□□□□ -0.28
SLC6A1-201ENST00000287766 NGRNQ9NPE2 291 aaKnown RBP13.28□□□□□ -0.28
SLC6A1-201ENST00000287766 AGO2Q9UKV8 859 aaKnown RBP13.28□□□□□ -0.28
SLC6A1-201ENST00000287766 TLR2O60603 784 aa13.28□□□□□ -0.28
SLC6A1-201ENST00000287766 SLITRK3O94933 977 aa13.28□□□□□ -0.28
SLC6A1-201ENST00000287766 SLC12A3P55017 1021 aa13.28□□□□□ -0.28
SLC6A1-201ENST00000287766 BYSLQ13895 437 aaKnown RBP13.28□□□□□ -0.28
SLC6A1-201ENST00000287766 RASSF3Q86WH2 238 aa13.28□□□□□ -0.28
SLC6A1-201ENST00000287766 ZBED8Q8IZ13 594 aa13.28□□□□□ -0.28
SLC6A1-201ENST00000287766 MCPH1Q8NEM0 835 aa13.28□□□□□ -0.28
SLC6A1-201ENST00000287766 ZDHHC15Q96MV8 337 aa13.28□□□□□ -0.28
SLC6A1-201ENST00000287766 AKT3Q9Y243 479 aa13.28□□□□□ -0.28
SLC6A1-201ENST00000287766 LMO7Q8WWI1 1683 aa13.27□□□□□ -0.28
SLC6A1-201ENST00000287766 KRT10P13645 584 aa13.27□□□□□ -0.28
SLC6A1-201ENST00000287766 SERPINB3P29508 390 aa13.27□□□□□ -0.28
SLC6A1-201ENST00000287766 CTCFP49711 727 aaPredicted RBP13.27□□□□□ -0.28
SLC6A1-201ENST00000287766 LMNB2Q03252 620 aa13.27□□□□□ -0.28
SLC6A1-201ENST00000287766 PDCD2Q16342 344 aaPredicted RBP13.27□□□□□ -0.28
SLC6A1-201ENST00000287766 SLC47A2Q86VL8 602 aa13.27□□□□□ -0.28
SLC6A1-201ENST00000287766 SLC17A8Q8NDX2 589 aa13.27□□□□□ -0.28
SLC6A1-201ENST00000287766 FAM149B1Q96BN6 582 aa13.27□□□□□ -0.28
SLC6A1-201ENST00000287766 FAM107AO95990 144 aa13.27□□□□□ -0.28
SLC6A1-201ENST00000287766 PPP6R3Q5H9R7 873 aaPredicted RBP13.27□□□□□ -0.28
SLC6A1-201ENST00000287766 TRIM42Q8IWZ5 723 aa13.27□□□□□ -0.28
SLC6A1-201ENST00000287766 GPD1LQ8N335 351 aa13.27□□□□□ -0.28
SLC6A1-201ENST00000287766 NSUN6Q8TEA1 469 aaKnown RBP13.27□□□□□ -0.28
SLC6A1-201ENST00000287766 KCNG1Q9UIX4 513 aa13.27□□□□□ -0.28
SLC6A1-201ENST00000287766 MEIS2O14770 477 aa13.27□□□□□ -0.29
SLC6A1-201ENST00000287766 TM4SF1P30408 202 aa13.27□□□□□ -0.29
SLC6A1-201ENST00000287766 RAPGEF5Q92565 580 aa13.27□□□□□ -0.29
SLC6A1-201ENST00000287766 CFAP36Q96G28 342 aa13.27□□□□□ -0.29
SLC6A1-201ENST00000287766 SEMA4AQ9H3S1 761 aa13.27□□□□□ -0.29
SLC6A1-201ENST00000287766 KRT82Q9NSB4 513 aa13.27□□□□□ -0.29
SLC6A1-201ENST00000287766 FGFR1OP2Q9NVK5 253 aa13.27□□□□□ -0.29
SLC6A1-201ENST00000287766 MYH2Q9UKX2 1941 aa13.27□□□□□ -0.29
SLC6A1-201ENST00000287766 ARHGAP10A1A4S6 786 aa13.27□□□□□ -0.29
SLC6A1-201ENST00000287766 ENTPD3O75355 529 aa13.27□□□□□ -0.29
SLC6A1-201ENST00000287766 TRPM8Q7Z2W7 1104 aa13.27□□□□□ -0.29
SLC6A1-201ENST00000287766 C4orf33Q8N1A6 199 aa13.27□□□□□ -0.29
SLC6A1-201ENST00000287766 DNAJC9Q8WXX5 260 aa13.27□□□□□ -0.29
SLC6A1-201ENST00000287766 HEXIM2Q96MH2 286 aaKnown RBP13.27□□□□□ -0.29
SLC6A1-201ENST00000287766 HEY1Q9Y5J3 304 aa13.27□□□□□ -0.29
SLC6A1-201ENST00000287766 IVNS1ABPQ9Y6Y0 642 aa13.27□□□□□ -0.29
SLC6A1-201ENST00000287766 KDM3BQ7LBC6 1761 aa13.27□□□□□ -0.29
SLC6A1-201ENST00000287766 EIF3DO15371 548 aaKnown RBP eCLIP13.26□□□□□ -0.29
SLC6A1-201ENST00000287766 CASP2P42575 452 aa13.26□□□□□ -0.29
SLC6A1-201ENST00000287766 CYTH1Q15438 398 aa13.26□□□□□ -0.29
SLC6A1-201ENST00000287766 SPATA21Q7Z572 469 aa13.26□□□□□ -0.29
SLC6A1-201ENST00000287766 PCGF5Q86SE9 256 aa13.26□□□□□ -0.29
SLC6A1-201ENST00000287766 SULF1Q8IWU6 871 aa13.26□□□□□ -0.29
SLC6A1-201ENST00000287766 SPIRE2Q8WWL2 714 aa13.26□□□□□ -0.29
SLC6A1-201ENST00000287766 OLFM3Q96PB7 478 aa13.26□□□□□ -0.29
SLC6A1-201ENST00000287766 CARD9Q9H257 536 aa13.26□□□□□ -0.29
SLC6A1-201ENST00000287766 PFASO15067 1338 aa13.26□□□□□ -0.29
SLC6A1-201ENST00000287766 ANP32DO95626 131 aa13.26□□□□□ -0.29
SLC6A1-201ENST00000287766 NR3C2P08235 984 aa13.26□□□□□ -0.29
SLC6A1-201ENST00000287766 UBTFL6P0CB48 400 aaPredicted RBP13.26□□□□□ -0.29
SLC6A1-201ENST00000287766 EN1Q05925 392 aaPredicted RBP13.26□□□□□ -0.29
SLC6A1-201ENST00000287766 MAPK7Q13164 816 aa13.26□□□□□ -0.29
SLC6A1-201ENST00000287766 KDM7AQ6ZMT4 941 aa13.26□□□□□ -0.29
SLC6A1-201ENST00000287766 TAS1R2Q8TE23 839 aa13.26□□□□□ -0.29
SLC6A1-201ENST00000287766 RUBCNQ92622 972 aa13.26□□□□□ -0.29
SLC6A1-201ENST00000287766 MKNK1Q9BUB5 465 aa13.26□□□□□ -0.29
SLC6A1-201ENST00000287766 PALMDQ9NP74 551 aa13.26□□□□□ -0.29
SLC6A1-201ENST00000287766 BAG5Q9UL15 447 aa13.26□□□□□ -0.29
SLC6A1-201ENST00000287766 ZBTB7AO95365 584 aa13.26□□□□□ -0.29
SLC6A1-201ENST00000287766 ARFIP2P53365 341 aa13.26□□□□□ -0.29
SLC6A1-201ENST00000287766 DLG4P78352 724 aa13.26□□□□□ -0.29
SLC6A1-201ENST00000287766 PDIA2Q13087 525 aaKnown RBP13.26□□□□□ -0.29
SLC6A1-201ENST00000287766 ARSHQ5FYA8 562 aa13.26□□□□□ -0.29
SLC6A1-201ENST00000287766 FAM160B1Q5W0V3 765 aa13.26□□□□□ -0.29
SLC6A1-201ENST00000287766 RTKN2Q8IZC4 609 aa13.26□□□□□ -0.29
SLC6A1-201ENST00000287766 CDKL2Q92772 493 aa13.26□□□□□ -0.29
SLC6A1-201ENST00000287766 FAM163AQ96GL9 167 aaPredicted RBP13.26□□□□□ -0.29
SLC6A1-201ENST00000287766 SNF8Q96H20 258 aa13.26□□□□□ -0.29
SLC6A1-201ENST00000287766 ANKRD36BP1Q96IX9 119 aa13.26□□□□□ -0.29
SLC6A1-201ENST00000287766 CDHR1Q96JP9 859 aa13.26□□□□□ -0.29
SLC6A1-201ENST00000287766 KLF6Q99612 283 aaPredicted RBP13.26□□□□□ -0.29
SLC6A1-201ENST00000287766 TMBIM4Q9HC24 238 aa13.26□□□□□ -0.29
SLC6A1-201ENST00000287766 TRAF3IP3Q9Y228 551 aa13.26□□□□□ -0.29
SLC6A1-201ENST00000287766 KIF1AQ12756 1690 aa13.26□□□□□ -0.29
SLC6A1-201ENST00000287766 PJA2O43164 708 aa13.25□□□□□ -0.29
SLC6A1-201ENST00000287766 CCND1P24385 295 aa13.25□□□□□ -0.29
SLC6A1-201ENST00000287766 AARSP49588 968 aaKnown RBP eCLIP13.25□□□□□ -0.29
SLC6A1-201ENST00000287766 ARSEP51690 589 aa13.25□□□□□ -0.29
SLC6A1-201ENST00000287766 YWHAEP62258 255 aaKnown RBP13.25□□□□□ -0.29
SLC6A1-201ENST00000287766 AP2B1P63010 937 aa13.25□□□□□ -0.29
SLC6A1-201ENST00000287766 RAPH1Q70E73 1250 aa13.25□□□□□ -0.29
SLC6A1-201ENST00000287766 AMIGO3Q86WK7 504 aa13.25□□□□□ -0.29
SLC6A1-201ENST00000287766 ARHGEF19Q8IW93 802 aa13.25□□□□□ -0.29
SLC6A1-201ENST00000287766 LRRC15Q8TF66 581 aa13.25□□□□□ -0.29
SLC6A1-201ENST00000287766 KRT35Q92764 455 aa13.25□□□□□ -0.29
SLC6A1-201ENST00000287766 HDAC11Q96DB2 347 aa13.25□□□□□ -0.29
SLC6A1-201ENST00000287766 ATG4CQ96DT6 458 aa13.25□□□□□ -0.29
SLC6A1-201ENST00000287766 MCF2LO15068 1137 aa13.25□□□□□ -0.29
SLC6A1-201ENST00000287766 TJP3O95049 919 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms