RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 PGBD3Q8N328 593 aa19.54■□□□□ 0.72
PCDH1-201ENST00000287008 GBP7Q8N8V2 638 aaPredicted RBP19.54■□□□□ 0.72
PCDH1-201ENST00000287008 TBX20Q9UMR3 447 aa19.54■□□□□ 0.72
PCDH1-201ENST00000287008 ORC6Q9Y5N6 252 aa19.54■□□□□ 0.72
PCDH1-201ENST00000287008 TNS2Q63HR2 1409 aa19.54■□□□□ 0.72
PCDH1-201ENST00000287008 MANSC4A6NHS7 340 aaPredicted RBP19.54■□□□□ 0.72
PCDH1-201ENST00000287008 PABPC5Q96DU9 382 aaKnown RBP19.54■□□□□ 0.72
PCDH1-201ENST00000287008 TRIM55Q9BYV6 548 aa19.54■□□□□ 0.72
PCDH1-201ENST00000287008 PITPNM3Q9BZ71 974 aa19.54■□□□□ 0.72
PCDH1-201ENST00000287008 IL25Q9H293 177 aa19.54■□□□□ 0.72
PCDH1-201ENST00000287008 NAGPAQ9UK23 515 aa19.54■□□□□ 0.72
PCDH1-201ENST00000287008 A0A087WUV0 522 aaPredicted RBP19.53■□□□□ 0.72
PCDH1-201ENST00000287008 WNT10BO00744 389 aa19.53■□□□□ 0.72
PCDH1-201ENST00000287008 CTDNEP1O95476 244 aa19.53■□□□□ 0.72
PCDH1-201ENST00000287008 SLC9A1P19634 815 aa19.53■□□□□ 0.72
PCDH1-201ENST00000287008 ANO4Q32M45 955 aa19.53■□□□□ 0.72
PCDH1-201ENST00000287008 TRAPPC11Q7Z392 1133 aa19.53■□□□□ 0.72
PCDH1-201ENST00000287008 DPF2Q92785 391 aa19.53■□□□□ 0.72
PCDH1-201ENST00000287008 PDCD2LQ9BRP1 358 aa19.53■□□□□ 0.72
PCDH1-201ENST00000287008 KIAA1683Q9H0B3 1180 aa19.53■□□□□ 0.72
PCDH1-201ENST00000287008 PCDHB8Q9UN66 801 aa19.53■□□□□ 0.72
PCDH1-201ENST00000287008 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.53■□□□□ 0.72
PCDH1-201ENST00000287008 FHOD1Q9Y613 1164 aa19.53■□□□□ 0.72
PCDH1-201ENST00000287008 SLC37A4O43826 429 aa19.53■□□□□ 0.72
PCDH1-201ENST00000287008 ARSEP51690 589 aa19.53■□□□□ 0.72
PCDH1-201ENST00000287008 IMPG1Q17R60 797 aa19.53■□□□□ 0.72
PCDH1-201ENST00000287008 RCOR2Q8IZ40 523 aa19.53■□□□□ 0.72
PCDH1-201ENST00000287008 GPC2Q8N158 579 aa19.53■□□□□ 0.72
PCDH1-201ENST00000287008 ATL2Q8NHH9 583 aa19.53■□□□□ 0.72
PCDH1-201ENST00000287008 KIFC3Q9BVG8 833 aa19.53■□□□□ 0.72
PCDH1-201ENST00000287008 GTSE1Q9NYZ3 720 aa19.53■□□□□ 0.72
PCDH1-201ENST00000287008 BCL9O00512 1426 aa19.53■□□□□ 0.72
PCDH1-201ENST00000287008 TMCC1O94876 653 aa19.53■□□□□ 0.72
PCDH1-201ENST00000287008 TYK2P29597 1187 aa19.53■□□□□ 0.72
PCDH1-201ENST00000287008 DCUN1D1Q96GG9 259 aa19.53■□□□□ 0.72
PCDH1-201ENST00000287008 SNF8Q96H20 258 aa19.53■□□□□ 0.72
PCDH1-201ENST00000287008 FAM200BP0CF97 657 aa19.53■□□□□ 0.72
PCDH1-201ENST00000287008 FAM96AQ9H5X1 160 aa19.53■□□□□ 0.72
PCDH1-201ENST00000287008 ZFATQ9P243 1243 aa19.53■□□□□ 0.72
PCDH1-201ENST00000287008 KLRC1P26715 233 aa19.52■□□□□ 0.72
PCDH1-201ENST00000287008 SERPINI1Q99574 410 aa19.52■□□□□ 0.72
PCDH1-201ENST00000287008 AP3B1O00203 1094 aa19.52■□□□□ 0.72
PCDH1-201ENST00000287008 HOXA2O43364 376 aa19.52■□□□□ 0.72
PCDH1-201ENST00000287008 ARP10275 920 aa19.52■□□□□ 0.72
PCDH1-201ENST00000287008 MUTP22033 750 aa19.52■□□□□ 0.72
PCDH1-201ENST00000287008 SESN2P58004 480 aaPredicted RBP19.52■□□□□ 0.72
PCDH1-201ENST00000287008 DHX34Q14147 1143 aaKnown RBP19.52■□□□□ 0.72
PCDH1-201ENST00000287008 EFHC1Q5JVL4 640 aa19.52■□□□□ 0.72
PCDH1-201ENST00000287008 HP1BP3Q5SSJ5 553 aaPredicted RBP19.52■□□□□ 0.72
PCDH1-201ENST00000287008 SZRD1Q7Z422 152 aa19.52■□□□□ 0.72
PCDH1-201ENST00000287008 ATPAF2Q8N5M1 289 aa19.52■□□□□ 0.72
PCDH1-201ENST00000287008 PBXIP1Q96AQ6 731 aa19.52■□□□□ 0.72
PCDH1-201ENST00000287008 UPF3AQ9H1J1 476 aaKnown RBP19.52■□□□□ 0.72
PCDH1-201ENST00000287008 TXLNGQ9NUQ3 528 aa19.52■□□□□ 0.72
PCDH1-201ENST00000287008 ESYT3A0FGR9 886 aa19.52■□□□□ 0.72
PCDH1-201ENST00000287008 NFIBO00712 420 aa19.52■□□□□ 0.72
PCDH1-201ENST00000287008 CTIFO43310 598 aaKnown RBP19.52■□□□□ 0.72
PCDH1-201ENST00000287008 GRAP2O75791 330 aa19.52■□□□□ 0.72
PCDH1-201ENST00000287008 ASMTLO95671 621 aa19.52■□□□□ 0.72
PCDH1-201ENST00000287008 HABP4Q5JVS0 413 aaKnown RBP19.52■□□□□ 0.72
PCDH1-201ENST00000287008 IL31Q6EBC2 164 aa19.52■□□□□ 0.72
PCDH1-201ENST00000287008 MCEEQ96PE7 176 aa19.52■□□□□ 0.72
PCDH1-201ENST00000287008 AGPAT3Q9NRZ7 376 aa19.52■□□□□ 0.72
PCDH1-201ENST00000287008 STRNO43815 780 aa19.52■□□□□ 0.71
PCDH1-201ENST00000287008 ITGB3P05106 788 aa19.52■□□□□ 0.71
PCDH1-201ENST00000287008 PMS2P54278 862 aa19.52■□□□□ 0.71
PCDH1-201ENST00000287008 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.52■□□□□ 0.71
PCDH1-201ENST00000287008 GPAT2Q6NUI2 795 aa19.52■□□□□ 0.71
PCDH1-201ENST00000287008 GIPC2Q8TF65 315 aa19.52■□□□□ 0.71
PCDH1-201ENST00000287008 AGAP3Q96P47 875 aa19.52■□□□□ 0.71
PCDH1-201ENST00000287008 GLIS2Q9BZE0 524 aaPredicted RBP19.52■□□□□ 0.71
PCDH1-201ENST00000287008 STARD7Q9NQZ5 370 aa19.52■□□□□ 0.71
PCDH1-201ENST00000287008 KLK14Q9P0G3 267 aa19.52■□□□□ 0.71
PCDH1-201ENST00000287008 OPHN1O60890 802 aa19.51■□□□□ 0.71
PCDH1-201ENST00000287008 DCAF6Q58WW2 860 aa19.51■□□□□ 0.71
PCDH1-201ENST00000287008 CD302Q8IX05 232 aa19.51■□□□□ 0.71
PCDH1-201ENST00000287008 AKT1S1Q96B36 256 aa19.51■□□□□ 0.71
PCDH1-201ENST00000287008 CHP1Q99653 195 aa19.51■□□□□ 0.71
PCDH1-201ENST00000287008 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.51■□□□□ 0.71
PCDH1-201ENST00000287008 KCNN4O15554 427 aa19.51■□□□□ 0.71
PCDH1-201ENST00000287008 NAMPTP43490 491 aa19.51■□□□□ 0.71
PCDH1-201ENST00000287008 KIZQ2M2Z5 673 aa19.51■□□□□ 0.71
PCDH1-201ENST00000287008 CHSY1Q86X52 802 aa19.51■□□□□ 0.71
PCDH1-201ENST00000287008 SYTL5Q8TDW5 730 aaPredicted RBP19.51■□□□□ 0.71
PCDH1-201ENST00000287008 RRAGCQ9HB90 399 aa19.51■□□□□ 0.71
PCDH1-201ENST00000287008 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.51■□□□□ 0.71
PCDH1-201ENST00000287008 SALL1Q9NSC2 1324 aa19.51■□□□□ 0.71
PCDH1-201ENST00000287008 GLRA4Q5JXX5 417 aa19.51■□□□□ 0.71
PCDH1-201ENST00000287008 ABI2Q9NYB9 513 aaPredicted RBP19.51■□□□□ 0.71
PCDH1-201ENST00000287008 PPARGC1AQ9UBK2 798 aaKnown RBP19.51■□□□□ 0.71
PCDH1-201ENST00000287008 AFF4Q9UHB7 1163 aaKnown RBP19.51■□□□□ 0.71
PCDH1-201ENST00000287008 APOBEC2Q9Y235 224 aaKnown RBP19.51■□□□□ 0.71
PCDH1-201ENST00000287008 HOXA10P31260 410 aaPredicted RBP19.51■□□□□ 0.71
PCDH1-201ENST00000287008 C3orf67Q6ZVT6 689 aa19.51■□□□□ 0.71
PCDH1-201ENST00000287008 ACAD11Q709F0 780 aa19.51■□□□□ 0.71
PCDH1-201ENST00000287008 H3BRB1 525 aa19.5■□□□□ 0.71
PCDH1-201ENST00000287008 PDHXO00330 501 aa19.5■□□□□ 0.71
PCDH1-201ENST00000287008 C2CD2LO14523 706 aa19.5■□□□□ 0.71
PCDH1-201ENST00000287008 MAPK13O15264 365 aa19.5■□□□□ 0.71
PCDH1-201ENST00000287008 RFC1P35251 1148 aaPredicted RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms