RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 ELMO2Q96JJ3 720 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 SPON2Q9BUD6 331 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 FOXP3Q9BZS1 431 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 HPS4Q9NQG7 708 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 DARSP14868 501 aaKnown RBP9.15□□□□□ -0.94
NIPBL-201ENST00000282516 MAPK1P28482 360 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 CTTNQ14247 550 aaKnown RBP9.15□□□□□ -0.94
NIPBL-201ENST00000282516 ADRM1Q16186 407 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 ZMYM1Q5SVZ6 1142 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 NFRKBQ6P4R8 1299 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 KLHL25Q9H0H3 589 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 DOLKQ9UPQ8 538 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 HEATR9A2RTY3 570 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 DTNBO60941 627 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 ADORA2BP29275 332 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 CACHD1Q5VU97 1274 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 RSBN1Q5VWQ0 802 aaPredicted RBP9.15□□□□□ -0.94
NIPBL-201ENST00000282516 ARMC3Q5W041 872 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 TRIQKQ629K1 86 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 STAG2Q8N3U4 1231 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 MYLK2Q9H1R3 596 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 SAMSN1Q9NSI8 373 aaKnown RBP9.15□□□□□ -0.94
NIPBL-201ENST00000282516 RHBDL2Q9NX52 303 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 NPC1L1Q9UHC9 1359 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 ALDH1A1P00352 501 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 MLH1P40692 756 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 BAG6P46379 1132 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 PRELPP51888 382 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 CCDC81Q6ZN84 652 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 PRMT1Q99873 361 aaKnown RBP9.15□□□□□ -0.94
NIPBL-201ENST00000282516 PDCD10Q9BUL8 212 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 GALNT8Q9NY28 637 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 FBXO40Q9UH90 709 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 LSM7Q9UK45 103 aaKnown RBP9.15□□□□□ -0.94
NIPBL-201ENST00000282516 SPACA6W5XKT8 324 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 IQCA1LA6NCM1 817 aa9.15□□□□□ -0.95
NIPBL-201ENST00000282516 STX7O15400 261 aaKnown RBP9.15□□□□□ -0.95
NIPBL-201ENST00000282516 KRT20P35900 424 aa9.15□□□□□ -0.95
NIPBL-201ENST00000282516 SLC1A1P43005 524 aa9.15□□□□□ -0.95
NIPBL-201ENST00000282516 GFPT1Q06210 699 aaPredicted RBP9.15□□□□□ -0.95
NIPBL-201ENST00000282516 SSH3Q8TE77 659 aa9.15□□□□□ -0.95
NIPBL-201ENST00000282516 SCFD2Q8WU76 684 aa9.15□□□□□ -0.95
NIPBL-201ENST00000282516 CNPY3Q9BT09 278 aa9.15□□□□□ -0.95
NIPBL-201ENST00000282516 ZHX2Q9Y6X8 837 aa9.15□□□□□ -0.95
NIPBL-201ENST00000282516 ADGRA3Q8IWK6 1321 aa9.15□□□□□ -0.95
NIPBL-201ENST00000282516 ACADSP16219 412 aa9.15□□□□□ -0.95
NIPBL-201ENST00000282516 CYP2C19P33261 490 aa9.15□□□□□ -0.95
NIPBL-201ENST00000282516 FLT3P36888 993 aa9.15□□□□□ -0.95
NIPBL-201ENST00000282516 TAB1Q15750 504 aa9.15□□□□□ -0.95
NIPBL-201ENST00000282516 LRIG3Q6UXM1 1119 aa9.15□□□□□ -0.95
NIPBL-201ENST00000282516 C11orf74Q86VG3 221 aa9.15□□□□□ -0.95
NIPBL-201ENST00000282516 GALNT4Q8N4A0 578 aa9.15□□□□□ -0.95
NIPBL-201ENST00000282516 WNK4Q96J92 1243 aa9.15□□□□□ -0.95
NIPBL-201ENST00000282516 XPO6Q96QU8 1125 aaKnown RBP9.15□□□□□ -0.95
NIPBL-201ENST00000282516 CARD14Q9BXL6 1004 aa9.15□□□□□ -0.95
NIPBL-201ENST00000282516 STAT3P40763 770 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 PURAQ00577 322 aaKnown RBP9.14□□□□□ -0.95
NIPBL-201ENST00000282516 RFX8Q6ZV50 586 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 MICALL2Q8IY33 904 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 NSUN7Q8NE18 718 aaKnown RBP9.14□□□□□ -0.95
NIPBL-201ENST00000282516 EPC1Q9H2F5 836 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 MYO3BQ8WXR4 1341 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 PIPSLA2A3N6 862 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 ENO3P13929 434 aaPredicted RBP9.14□□□□□ -0.95
NIPBL-201ENST00000282516 DGKHQ86XP1 1220 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 POLR3FQ9H1D9 316 aaPredicted RBP9.14□□□□□ -0.95
NIPBL-201ENST00000282516 UBAP1Q9NZ09 502 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 CTNNAL1Q9UBT7 734 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.14□□□□□ -0.95
NIPBL-201ENST00000282516 NCAPD2Q15021 1401 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 EIF4E1BA6NMX2 242 aaKnown RBP9.14□□□□□ -0.95
NIPBL-201ENST00000282516 SNPHO15079 494 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 PGK2P07205 417 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 TMC5Q6UXY8 1006 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 NARS2Q96I59 477 aaKnown RBP9.14□□□□□ -0.95
NIPBL-201ENST00000282516 UBXN6Q9BZV1 441 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 SF3B1O75533 1304 aaKnown RBP eCLIP9.14□□□□□ -0.953e-6■■■■■ 101.7
NIPBL-201ENST00000282516 DNMT1P26358 1616 aaKnown RBP9.14□□□□□ -0.95
NIPBL-201ENST00000282516 IL6P05231 212 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 PRIM2P49643 509 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 RPS7P62081 194 aaKnown RBP9.14□□□□□ -0.95
NIPBL-201ENST00000282516 ALFQ53S48 1182 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 TMEM154Q6P9G4 183 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 MRPL4Q9BYD3 311 aaKnown RBP9.14□□□□□ -0.95
NIPBL-201ENST00000282516 BHMT2Q9H2M3 363 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 PCSK1NQ9UHG2 260 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 ABT1Q9ULW3 272 aaKnown RBP9.14□□□□□ -0.95
NIPBL-201ENST00000282516 GTF2A1LQ9UNN4 478 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 CHMP2BQ9UQN3 213 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 PDE5AO76074 875 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 FGFR4P22455 802 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 SFNP31947 248 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 ST8SIA6P61647 398 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 PWP1Q13610 501 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 C1DQ13901 141 aaKnown RBP9.14□□□□□ -0.95
NIPBL-201ENST00000282516 CYP4Z1Q86W10 505 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 MRPL39Q9NYK5 338 aaKnown RBP9.14□□□□□ -0.95
NIPBL-201ENST00000282516 ADGRA2Q96PE1 1338 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 MTMR1Q13613 665 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 COBLL1Q53SF7 1204 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms