RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 CNTNAP2Q9UHC6 1331 aa22.55■■□□□ 1.2
YBX3-202ENST00000279550 SPDYE4A6NLX3 237 aa22.54■■□□□ 1.2
YBX3-202ENST00000279550 HLA-DRAP01903 254 aa22.54■■□□□ 1.2
YBX3-202ENST00000279550 PTENP60484 403 aa22.54■■□□□ 1.2
YBX3-202ENST00000279550 ZACNQ401N2 412 aa22.54■■□□□ 1.2
YBX3-202ENST00000279550 TAF3Q5VWG9 929 aa22.54■■□□□ 1.2
YBX3-202ENST00000279550 ZBTB33Q86T24 672 aa22.54■■□□□ 1.2
YBX3-202ENST00000279550 EPS8L1Q8TE68 723 aa22.54■■□□□ 1.2
YBX3-202ENST00000279550 FNBP1Q96RU3 617 aa22.54■■□□□ 1.2
YBX3-202ENST00000279550 MRPL4Q9BYD3 311 aaKnown RBP22.54■■□□□ 1.2
YBX3-202ENST00000279550 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.54■■□□□ 1.2
YBX3-202ENST00000279550 IFT122Q9HBG6 1241 aa22.54■■□□□ 1.2
YBX3-202ENST00000279550 DNAH12Q6ZR08 3092 aa22.54■■□□□ 1.2
YBX3-202ENST00000279550 SMIM35A0A1B0GVV1 85 aa22.54■■□□□ 1.2
YBX3-202ENST00000279550 ABLIM1O14639 778 aa22.54■■□□□ 1.2
YBX3-202ENST00000279550 TREHO43280 583 aa22.54■■□□□ 1.2
YBX3-202ENST00000279550 FAM189A1O60320 539 aa22.54■■□□□ 1.2
YBX3-202ENST00000279550 CYP2C9P11712 490 aa22.54■■□□□ 1.2
YBX3-202ENST00000279550 TNNI1P19237 187 aa22.54■■□□□ 1.2
YBX3-202ENST00000279550 ZNF200P98182 395 aaPredicted RBP22.54■■□□□ 1.2
YBX3-202ENST00000279550 TMCO3Q6UWJ1 677 aa22.54■■□□□ 1.2
YBX3-202ENST00000279550 SLC47A2Q86VL8 602 aa22.54■■□□□ 1.2
YBX3-202ENST00000279550 MS4A14Q96JA4 679 aa22.54■■□□□ 1.2
YBX3-202ENST00000279550 RPGRIP1Q96KN7 1286 aa22.54■■□□□ 1.2
YBX3-202ENST00000279550 CGRRF1Q99675 332 aa22.54■■□□□ 1.2
YBX3-202ENST00000279550 ACO2Q99798 780 aaKnown RBP22.54■■□□□ 1.2
YBX3-202ENST00000279550 GTF2IRD1Q9UHL9 959 aa22.54■■□□□ 1.2
YBX3-202ENST00000279550 LDHAP00338 332 aaKnown RBP22.53■■□□□ 1.2
YBX3-202ENST00000279550 ABCB4P21439 1286 aa22.53■■□□□ 1.2
YBX3-202ENST00000279550 TNFSF9P41273 254 aa22.53■■□□□ 1.2
YBX3-202ENST00000279550 PHKA2P46019 1235 aa22.53■■□□□ 1.2
YBX3-202ENST00000279550 MAPK6Q16659 721 aa22.53■■□□□ 1.2
YBX3-202ENST00000279550 PTPROQ16827 1216 aa22.53■■□□□ 1.2
YBX3-202ENST00000279550 SCARA3Q6AZY7 606 aa22.53■■□□□ 1.2
YBX3-202ENST00000279550 RUFY4Q6ZNE9 571 aa22.53■■□□□ 1.2
YBX3-202ENST00000279550 PPP1R16BQ96T49 567 aa22.53■■□□□ 1.2
YBX3-202ENST00000279550 FAM49AQ9H0Q0 323 aaPredicted RBP22.53■■□□□ 1.2
YBX3-202ENST00000279550 A0A087WZ62 844 aa22.52■■□□□ 1.2
YBX3-202ENST00000279550 CALCAP01258 141 aa22.52■■□□□ 1.2
YBX3-202ENST00000279550 ACLYP53396 1101 aa22.52■■□□□ 1.2
YBX3-202ENST00000279550 VSNL1P62760 191 aa22.52■■□□□ 1.2
YBX3-202ENST00000279550 IFI16Q16666 785 aaKnown RBP22.52■■□□□ 1.2
YBX3-202ENST00000279550 SLFN11Q7Z7L1 901 aa22.52■■□□□ 1.2
YBX3-202ENST00000279550 IFNLR1Q8IU57 520 aaPredicted RBP22.52■■□□□ 1.2
YBX3-202ENST00000279550 OR5B17Q8NGF7 314 aa22.52■■□□□ 1.2
YBX3-202ENST00000279550 FDXACB1Q9BRP7 624 aaPredicted RBP22.52■■□□□ 1.2
YBX3-202ENST00000279550 THAP2Q9H0W7 228 aa22.52■■□□□ 1.2
YBX3-202ENST00000279550 UNC93B1Q9H1C4 597 aa22.52■■□□□ 1.2
YBX3-202ENST00000279550 OSGEPQ9NPF4 335 aa22.52■■□□□ 1.2
YBX3-202ENST00000279550 MOXD2PA6NHM9 499 aa22.51■■□□□ 1.19
YBX3-202ENST00000279550 CLDN3O15551 220 aa22.51■■□□□ 1.19
YBX3-202ENST00000279550 ZC3H11AO75152 810 aaKnown RBP eCLIP22.51■■□□□ 1.193e-8■■□□□ 13.7
YBX3-202ENST00000279550 TOM1L1O75674 476 aa22.51■■□□□ 1.19
YBX3-202ENST00000279550 CABYRO75952 493 aa22.51■■□□□ 1.19
YBX3-202ENST00000279550 PIK3CAP42336 1068 aa22.51■■□□□ 1.19
YBX3-202ENST00000279550 BRD3Q15059 726 aa22.51■■□□□ 1.19
YBX3-202ENST00000279550 SPOPLQ6IQ16 392 aa22.51■■□□□ 1.19
YBX3-202ENST00000279550 SLC35G2Q8TBE7 412 aa22.51■■□□□ 1.19
YBX3-202ENST00000279550 NLRP7Q8WX94 980 aa22.51■■□□□ 1.19
YBX3-202ENST00000279550 RFFLQ8WZ73 363 aa22.51■■□□□ 1.19
YBX3-202ENST00000279550 MINDY3Q9H8M7 445 aa22.51■■□□□ 1.19
YBX3-202ENST00000279550 STXBP5LQ9Y2K9 1186 aa22.51■■□□□ 1.19
YBX3-202ENST00000279550 INO80B-WBP1J3KQ70 363 aa22.51■■□□□ 1.19
YBX3-202ENST00000279550 B4GALT5O43286 388 aa22.51■■□□□ 1.19
YBX3-202ENST00000279550 KIF4AO95239 1232 aa22.51■■□□□ 1.19
YBX3-202ENST00000279550 MMEP08473 750 aa22.51■■□□□ 1.19
YBX3-202ENST00000279550 HSPA8P11142 646 aaKnown RBP22.51■■□□□ 1.19
YBX3-202ENST00000279550 FMO1Q01740 532 aa22.51■■□□□ 1.19
YBX3-202ENST00000279550 GCNT1Q02742 428 aa22.51■■□□□ 1.19
YBX3-202ENST00000279550 MBTD1Q05BQ5 628 aa22.51■■□□□ 1.19
YBX3-202ENST00000279550 BIRC3Q13489 604 aa22.51■■□□□ 1.19
YBX3-202ENST00000279550 ZNF410Q86VK4 478 aa22.51■■□□□ 1.19
YBX3-202ENST00000279550 SESTD1Q86VW0 696 aa22.51■■□□□ 1.19
YBX3-202ENST00000279550 BRSK2Q8IWQ3 736 aa22.51■■□□□ 1.19
YBX3-202ENST00000279550 CTNNBL1Q8WYA6 563 aaPredicted RBP22.51■■□□□ 1.19
YBX3-202ENST00000279550 TSEN34Q9BSV6 310 aaKnown RBP22.51■■□□□ 1.19
YBX3-202ENST00000279550 INO80BQ9C086 356 aaPredicted RBP22.51■■□□□ 1.19
YBX3-202ENST00000279550 ISCUQ9H1K1 167 aa22.51■■□□□ 1.19
YBX3-202ENST00000279550 FZD8Q9H461 694 aa22.51■■□□□ 1.19
YBX3-202ENST00000279550 APOBEC3GQ9HC16 384 aaKnown RBP22.51■■□□□ 1.19
YBX3-202ENST00000279550 PAK6Q9NQU5 681 aaPredicted RBP22.51■■□□□ 1.19
YBX3-202ENST00000279550 C1orf112Q9NSG2 853 aa22.51■■□□□ 1.19
YBX3-202ENST00000279550 FAM53CQ9NYF3 392 aa22.51■■□□□ 1.19
YBX3-202ENST00000279550 CCDC151A5D8V7 595 aa22.5■■□□□ 1.19
YBX3-202ENST00000279550 ANKRD62A6NC57 917 aa22.5■■□□□ 1.19
YBX3-202ENST00000279550 CYP11B1P15538 503 aa22.5■■□□□ 1.19
YBX3-202ENST00000279550 CDC42EP1Q00587 391 aa22.5■■□□□ 1.19
YBX3-202ENST00000279550 FAM47CQ5HY64 1035 aa22.5■■□□□ 1.19
YBX3-202ENST00000279550 GDF6Q6KF10 455 aaPredicted RBP22.5■■□□□ 1.19
YBX3-202ENST00000279550 MMGT1Q8N4V1 131 aa22.5■■□□□ 1.19
YBX3-202ENST00000279550 SPATA4Q8NEY3 305 aa22.5■■□□□ 1.19
YBX3-202ENST00000279550 DNAJB3Q8WWF6 145 aa22.5■■□□□ 1.19
YBX3-202ENST00000279550 SCLT1Q96NL6 688 aa22.5■■□□□ 1.19
YBX3-202ENST00000279550 COG5Q9UP83 839 aa22.5■■□□□ 1.19
YBX3-202ENST00000279550 GRIN2DO15399 1336 aa22.5■■□□□ 1.19
YBX3-202ENST00000279550 FRMPD3Q5JV73 1810 aa22.49■■□□□ 1.19
YBX3-202ENST00000279550 FTLP02792 175 aaPredicted RBP22.49■■□□□ 1.19
YBX3-202ENST00000279550 IQCF3P0C7M6 154 aa22.49■■□□□ 1.19
YBX3-202ENST00000279550 ITIH3Q06033 890 aa22.49■■□□□ 1.19
YBX3-202ENST00000279550 MCL1Q07820 350 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms