RNA–Protein interactions for RNA: ENST00000273027.6

CPNE9-201, Transcript of copine family member 9, humanhuman

TSL 3

Gene CPNE9, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-201ENST00000273027 CCND2P30279 289 aa10.78□□□□□ -0.68
CPNE9-201ENST00000273027 COILP38432 576 aaPredicted RBP10.78□□□□□ -0.68
CPNE9-201ENST00000273027 MMP13P45452 471 aa10.78□□□□□ -0.68
CPNE9-201ENST00000273027 MRPS25P82663 173 aaKnown RBP10.78□□□□□ -0.68
CPNE9-201ENST00000273027 CENPCQ03188 943 aa10.78□□□□□ -0.68
CPNE9-201ENST00000273027 PPP3CAQ08209 521 aa10.78□□□□□ -0.68
CPNE9-201ENST00000273027 MOGSQ13724 837 aa10.78□□□□□ -0.68
CPNE9-201ENST00000273027 ITIH4Q14624 930 aa10.78□□□□□ -0.68
CPNE9-201ENST00000273027 SNRNP35Q16560 246 aaKnown RBP10.78□□□□□ -0.68
CPNE9-201ENST00000273027 LRIT3Q3SXY7 679 aa10.78□□□□□ -0.68
CPNE9-201ENST00000273027 ERMARDQ5T6L9 678 aa10.78□□□□□ -0.68
CPNE9-201ENST00000273027 DCAF12L1Q5VU92 463 aa10.78□□□□□ -0.68
CPNE9-201ENST00000273027 SLFN12LQ6IEE8 588 aa10.78□□□□□ -0.68
CPNE9-201ENST00000273027 GPAT2Q6NUI2 795 aa10.78□□□□□ -0.68
CPNE9-201ENST00000273027 SLC13A5Q86YT5 568 aaPredicted RBP10.78□□□□□ -0.68
CPNE9-201ENST00000273027 GPD1LQ8N335 351 aa10.78□□□□□ -0.68
CPNE9-201ENST00000273027 CLEC4DQ8WXI8 215 aa10.78□□□□□ -0.68
CPNE9-201ENST00000273027 ART4Q93070 314 aa10.78□□□□□ -0.68
CPNE9-201ENST00000273027 ARHGEF26Q96DR7 871 aa10.78□□□□□ -0.68
CPNE9-201ENST00000273027 CYFIP2Q96F07 1278 aa10.78□□□□□ -0.68
CPNE9-201ENST00000273027 CABS1Q96KC9 395 aa10.78□□□□□ -0.68
CPNE9-201ENST00000273027 IFT74Q96LB3 600 aa10.78□□□□□ -0.68
CPNE9-201ENST00000273027 SERPINB12Q96P63 405 aa10.78□□□□□ -0.68
CPNE9-201ENST00000273027 HINFPQ9BQA5 517 aa10.78□□□□□ -0.68
CPNE9-201ENST00000273027 UBE2OQ9C0C9 1292 aaKnown RBP10.78□□□□□ -0.68
CPNE9-201ENST00000273027 CRISPLD2Q9H0B8 497 aa10.78□□□□□ -0.68
CPNE9-201ENST00000273027 TMEM117Q9H0C3 514 aa10.78□□□□□ -0.68
CPNE9-201ENST00000273027 MRPL47Q9HD33 250 aaKnown RBP10.78□□□□□ -0.68
CPNE9-201ENST00000273027 A1CFQ9NQ94 594 aaKnown RBP10.78□□□□□ -0.68
CPNE9-201ENST00000273027 RAB20Q9NX57 234 aa10.78□□□□□ -0.68
CPNE9-201ENST00000273027 WRAP73Q9P2S5 460 aaPredicted RBP10.78□□□□□ -0.68
CPNE9-201ENST00000273027 KCNH4Q9UQ05 1017 aa10.78□□□□□ -0.68
CPNE9-201ENST00000273027 ATP8A1Q9Y2Q0 1164 aa10.78□□□□□ -0.68
CPNE9-201ENST00000273027 PCDHB2Q9Y5E7 798 aa10.78□□□□□ -0.68
CPNE9-201ENST00000273027 PCDHA10Q9Y5I2 948 aa10.78□□□□□ -0.68
CPNE9-201ENST00000273027 IGSF9BQ9UPX0 1349 aa10.78□□□□□ -0.68
CPNE9-201ENST00000273027 WDR81Q562E7 1941 aa10.78□□□□□ -0.68
CPNE9-201ENST00000273027 TNPO2O14787 897 aaKnown RBP10.77□□□□□ -0.69
CPNE9-201ENST00000273027 PSAPP07602 524 aa10.77□□□□□ -0.69
CPNE9-201ENST00000273027 CYP11B1P15538 503 aa10.77□□□□□ -0.69
CPNE9-201ENST00000273027 COMTP21964 271 aa10.77□□□□□ -0.69
CPNE9-201ENST00000273027 MAGEA10P43363 369 aaPredicted RBP10.77□□□□□ -0.69
CPNE9-201ENST00000273027 AP3M2P53677 418 aa10.77□□□□□ -0.69
CPNE9-201ENST00000273027 MAGOHP61326 146 aaKnown RBP10.77□□□□□ -0.69
CPNE9-201ENST00000273027 CLDN10P78369 228 aa10.77□□□□□ -0.69
CPNE9-201ENST00000273027 ACTN3Q08043 901 aaPredicted RBP10.77□□□□□ -0.69
CPNE9-201ENST00000273027 PGM5Q15124 567 aa10.77□□□□□ -0.69
CPNE9-201ENST00000273027 SHROOM1Q2M3G4 852 aaPredicted RBP10.77□□□□□ -0.69
CPNE9-201ENST00000273027 XKR9Q5GH70 373 aa10.77□□□□□ -0.69
CPNE9-201ENST00000273027 TNFAIP8L3Q5GJ75 292 aa10.77□□□□□ -0.69
CPNE9-201ENST00000273027 WDR44Q5JSH3 913 aa10.77□□□□□ -0.69
CPNE9-201ENST00000273027 LIN9Q5TKA1 542 aa10.77□□□□□ -0.69
CPNE9-201ENST00000273027 ICE2Q659A1 982 aa10.77□□□□□ -0.69
CPNE9-201ENST00000273027 CPLX4Q7Z7G2 160 aa10.77□□□□□ -0.69
CPNE9-201ENST00000273027 DDX42Q86XP3 938 aaKnown RBP eCLIP10.77□□□□□ -0.69
CPNE9-201ENST00000273027 RELL1Q8IUW5 271 aa10.77□□□□□ -0.69
CPNE9-201ENST00000273027 ARHGEF19Q8IW93 802 aa10.77□□□□□ -0.69
CPNE9-201ENST00000273027 CCDC105Q8IYK2 499 aa10.77□□□□□ -0.69
CPNE9-201ENST00000273027 TDHQ8IZJ6 230 aa10.77□□□□□ -0.69
CPNE9-201ENST00000273027 PPM1KQ8N3J5 372 aa10.77□□□□□ -0.69
CPNE9-201ENST00000273027 RIBC1Q8N443 379 aaPredicted RBP10.77□□□□□ -0.69
CPNE9-201ENST00000273027 GBP7Q8N8V2 638 aaPredicted RBP10.77□□□□□ -0.69
CPNE9-201ENST00000273027 PRELID2Q8N945 189 aa10.77□□□□□ -0.69
CPNE9-201ENST00000273027 TMEM161BQ8NDZ6 487 aa10.77□□□□□ -0.69
CPNE9-201ENST00000273027 SYTL5Q8TDW5 730 aaPredicted RBP10.77□□□□□ -0.69
CPNE9-201ENST00000273027 PXYLP1Q8TE99 480 aa10.77□□□□□ -0.69
CPNE9-201ENST00000273027 TATDN2Q93075 761 aa10.77□□□□□ -0.69
CPNE9-201ENST00000273027 CHMP6Q96FZ7 201 aa10.77□□□□□ -0.69
CPNE9-201ENST00000273027 XPO6Q96QU8 1125 aaKnown RBP10.77□□□□□ -0.69
CPNE9-201ENST00000273027 UIMC1Q96RL1 719 aa10.77□□□□□ -0.69
CPNE9-201ENST00000273027 MOV10L1Q9BXT6 1211 aaKnown RBP10.77□□□□□ -0.69
CPNE9-201ENST00000273027 NEUROG2Q9H2A3 272 aa10.77□□□□□ -0.69
CPNE9-201ENST00000273027 DPH5Q9H2P9 285 aa10.77□□□□□ -0.69
CPNE9-201ENST00000273027 CENPHQ9H3R5 247 aa10.77□□□□□ -0.69
CPNE9-201ENST00000273027 AS3MTQ9HBK9 375 aa10.77□□□□□ -0.69
CPNE9-201ENST00000273027 KMT5AQ9NQR1 393 aa10.77□□□□□ -0.69
CPNE9-201ENST00000273027 PAK6Q9NQU5 681 aaPredicted RBP10.77□□□□□ -0.69
CPNE9-201ENST00000273027 GRHL1Q9NZI5 618 aa10.77□□□□□ -0.69
CPNE9-201ENST00000273027 BCCIPQ9P287 314 aaKnown RBP eCLIP10.77□□□□□ -0.69
CPNE9-201ENST00000273027 TRPC6Q9Y210 931 aa10.77□□□□□ -0.69
CPNE9-201ENST00000273027 SCINQ9Y6U3 715 aa10.77□□□□□ -0.69
CPNE9-201ENST00000273027 PTPRFP10586 1907 aa10.76□□□□□ -0.69
CPNE9-201ENST00000273027 SMCHD1A6NHR9 2005 aa10.76□□□□□ -0.69
CPNE9-201ENST00000273027 CXCL11O14625 94 aa10.76□□□□□ -0.69
CPNE9-201ENST00000273027 ZBTB39O15060 712 aa10.76□□□□□ -0.69
CPNE9-201ENST00000273027 PSTPIP1O43586 416 aa10.76□□□□□ -0.69
CPNE9-201ENST00000273027 LRRN2O75325 713 aa10.76□□□□□ -0.69
CPNE9-201ENST00000273027 CHRNB2P17787 502 aa10.76□□□□□ -0.69
CPNE9-201ENST00000273027 TBXAS1P24557 533 aaPredicted RBP10.76□□□□□ -0.69
CPNE9-201ENST00000273027 HPDP32754 393 aaPredicted RBP10.76□□□□□ -0.69
CPNE9-201ENST00000273027 GCLMP48507 274 aa10.76□□□□□ -0.69
CPNE9-201ENST00000273027 PEX3P56589 373 aa10.76□□□□□ -0.69
CPNE9-201ENST00000273027 FMO1Q01740 532 aa10.76□□□□□ -0.69
CPNE9-201ENST00000273027 CYP24A1Q07973 514 aa10.76□□□□□ -0.69
CPNE9-201ENST00000273027 NR1H3Q13133 447 aa10.76□□□□□ -0.69
CPNE9-201ENST00000273027 MESDQ14696 234 aa10.76□□□□□ -0.69
CPNE9-201ENST00000273027 CLEC16AQ2KHT3 1053 aa10.76□□□□□ -0.69
CPNE9-201ENST00000273027 C1orf220Q5T0J3 134 aa10.76□□□□□ -0.69
CPNE9-201ENST00000273027 ZDHHC24Q6UX98 284 aa10.76□□□□□ -0.69
CPNE9-201ENST00000273027 PACS2Q86VP3 889 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms