RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 URGCPQ8TCY9 931 aa16.53■□□□□ 0.24
UBR3-201ENST00000272793 CDYLQ9Y232 598 aa16.53■□□□□ 0.24
UBR3-201ENST00000272793 EYA2O00167 538 aa16.53■□□□□ 0.24
UBR3-201ENST00000272793 S100GP29377 79 aa16.53■□□□□ 0.24
UBR3-201ENST00000272793 RCVRNP35243 200 aa16.53■□□□□ 0.24
UBR3-201ENST00000272793 ORC2Q13416 577 aaPredicted RBP16.53■□□□□ 0.24
UBR3-201ENST00000272793 EFR3AQ14156 821 aa16.53■□□□□ 0.24
UBR3-201ENST00000272793 SAMD3Q8N6K7 520 aa16.53■□□□□ 0.24
UBR3-201ENST00000272793 CDC73Q6P1J9 531 aa16.53■□□□□ 0.24
UBR3-201ENST00000272793 ERN1O75460 977 aaKnown RBP16.53■□□□□ 0.24
UBR3-201ENST00000272793 DGKIO75912 1065 aa16.53■□□□□ 0.24
UBR3-201ENST00000272793 PPARAQ07869 468 aa16.53■□□□□ 0.24
UBR3-201ENST00000272793 ATP1A4Q13733 1029 aa16.53■□□□□ 0.24
UBR3-201ENST00000272793 EIF4A2Q14240 407 aaKnown RBP16.53■□□□□ 0.24
UBR3-201ENST00000272793 TSPAN14Q8NG11 270 aa16.53■□□□□ 0.24
UBR3-201ENST00000272793 PACSIN1Q9BY11 444 aa16.53■□□□□ 0.24
UBR3-201ENST00000272793 CEP44Q9C0F1 390 aa16.53■□□□□ 0.24
UBR3-201ENST00000272793 SNX24Q9Y343 169 aa16.53■□□□□ 0.24
UBR3-201ENST00000272793 POU1F1P28069 291 aa16.52■□□□□ 0.24
UBR3-201ENST00000272793 MPP2Q14168 576 aa16.52■□□□□ 0.24
UBR3-201ENST00000272793 AP4S1Q9Y587 144 aa16.52■□□□□ 0.24
UBR3-201ENST00000272793 TCP10L2B9ZVM9 353 aa16.52■□□□□ 0.24
UBR3-201ENST00000272793 SRP54P61011 504 aaKnown RBP16.52■□□□□ 0.24
UBR3-201ENST00000272793 C12orf60Q5U649 245 aa16.52■□□□□ 0.24
UBR3-201ENST00000272793 SHCBP1Q8NEM2 672 aa16.52■□□□□ 0.24
UBR3-201ENST00000272793 WNK4Q96J92 1243 aa16.52■□□□□ 0.24
UBR3-201ENST00000272793 ZSCAN10Q96SZ4 725 aaPredicted RBP16.52■□□□□ 0.24
UBR3-201ENST00000272793 EPS8L2Q9H6S3 715 aa16.52■□□□□ 0.24
UBR3-201ENST00000272793 TMEM138Q9NPI0 162 aa16.52■□□□□ 0.24
UBR3-201ENST00000272793 LATS2Q9NRM7 1088 aa16.52■□□□□ 0.24
UBR3-201ENST00000272793 POTECB2RU33 542 aa16.52■□□□□ 0.24
UBR3-201ENST00000272793 KHDRBS3O75525 346 aaKnown RBP16.52■□□□□ 0.24
UBR3-201ENST00000272793 ZMYND11Q15326 602 aa16.52■□□□□ 0.24
UBR3-201ENST00000272793 SYTL1Q8IYJ3 562 aa16.52■□□□□ 0.24
UBR3-201ENST00000272793 SIK2Q9H0K1 926 aa16.52■□□□□ 0.24
UBR3-201ENST00000272793 SMARCA4P51532 1647 aa16.52■□□□□ 0.24
UBR3-201ENST00000272793 SKAP2O75563 359 aaPredicted RBP16.52■□□□□ 0.23
UBR3-201ENST00000272793 SSTR3P32745 418 aaPredicted RBP16.52■□□□□ 0.23
UBR3-201ENST00000272793 PSTPIP1O43586 416 aa16.52■□□□□ 0.23
UBR3-201ENST00000272793 CAMKK1Q8N5S9 505 aa16.52■□□□□ 0.23
UBR3-201ENST00000272793 CMTM5Q96DZ9 223 aa16.52■□□□□ 0.23
UBR3-201ENST00000272793 CEP170P1Q96L14 293 aa16.52■□□□□ 0.23
UBR3-201ENST00000272793 RHOBTB2Q9BYZ6 727 aa16.52■□□□□ 0.23
UBR3-201ENST00000272793 TJP2Q9UDY2 1190 aa16.52■□□□□ 0.23
UBR3-201ENST00000272793 PRG4Q92954 1404 aaPredicted RBP16.52■□□□□ 0.23
UBR3-201ENST00000272793 NCOA1Q15788 1441 aa16.52■□□□□ 0.23
UBR3-201ENST00000272793 ZBTB39O15060 712 aa16.52■□□□□ 0.23
UBR3-201ENST00000272793 PPP2R2AP63151 447 aa16.52■□□□□ 0.23
UBR3-201ENST00000272793 DDB1Q16531 1140 aa16.52■□□□□ 0.23
UBR3-201ENST00000272793 NT5DC4Q86YG4 428 aa16.52■□□□□ 0.23
UBR3-201ENST00000272793 UBXN6Q9BZV1 441 aa16.52■□□□□ 0.23
UBR3-201ENST00000272793 DAPK2Q9UIK4 370 aa16.52■□□□□ 0.23
UBR3-201ENST00000272793 BTBD3Q9Y2F9 522 aa16.52■□□□□ 0.23
UBR3-201ENST00000272793 RBM7Q9Y580 266 aaKnown RBP16.52■□□□□ 0.23
UBR3-201ENST00000272793 DYNC1LI2O43237 492 aaPredicted RBP16.51■□□□□ 0.23
UBR3-201ENST00000272793 NDUFA10O95299 355 aa16.51■□□□□ 0.23
UBR3-201ENST00000272793 TGFBR2P37173 567 aa16.51■□□□□ 0.23
UBR3-201ENST00000272793 TAF13Q15543 124 aa16.51■□□□□ 0.23
UBR3-201ENST00000272793 SYCP2LQ5T4T6 812 aa16.51■□□□□ 0.23
UBR3-201ENST00000272793 LLGL2Q6P1M3 1020 aa16.51■□□□□ 0.23
UBR3-201ENST00000272793 USP40Q9NVE5 1235 aa16.51■□□□□ 0.23
UBR3-201ENST00000272793 AQRO60306 1485 aaKnown RBP eCLIP16.51■□□□□ 0.23
UBR3-201ENST00000272793 LRRC14BA6NHZ5 514 aa16.51■□□□□ 0.23
UBR3-201ENST00000272793 EXTL3O43909 919 aa16.51■□□□□ 0.23
UBR3-201ENST00000272793 ABCD1P33897 745 aa16.51■□□□□ 0.23
UBR3-201ENST00000272793 RASGRP4Q8TDF6 673 aa16.51■□□□□ 0.23
UBR3-201ENST00000272793 RFT1Q96AA3 541 aa16.51■□□□□ 0.23
UBR3-201ENST00000272793 CALR3Q96L12 384 aaKnown RBP16.51■□□□□ 0.23
UBR3-201ENST00000272793 FAM153AQ9UHL3 310 aa16.51■□□□□ 0.23
UBR3-201ENST00000272793 ATG7O95352 703 aa16.51■□□□□ 0.23
UBR3-201ENST00000272793 HSD3B1P14060 373 aa16.51■□□□□ 0.23
UBR3-201ENST00000272793 ROR1Q01973 937 aa16.51■□□□□ 0.23
UBR3-201ENST00000272793 PTH1RQ03431 593 aa16.51■□□□□ 0.23
UBR3-201ENST00000272793 CXorf56Q9H5V9 222 aa16.51■□□□□ 0.23
UBR3-201ENST00000272793 BABAM1Q9NWV8 329 aa16.51■□□□□ 0.23
UBR3-201ENST00000272793 POLR1DQ9Y2S0 133 aa16.51■□□□□ 0.23
UBR3-201ENST00000272793 DYRK3O43781 588 aa16.51■□□□□ 0.23
UBR3-201ENST00000272793 CACNB2Q08289 660 aaPredicted RBP16.51■□□□□ 0.23
UBR3-201ENST00000272793 ZMYM6O95789 1325 aa16.51■□□□□ 0.23
UBR3-201ENST00000272793 FAM25EA8MYX2 175 aa16.51■□□□□ 0.23
UBR3-201ENST00000272793 ADCY6O43306 1168 aa16.51■□□□□ 0.23
UBR3-201ENST00000272793 GUCY1A2P33402 732 aa16.51■□□□□ 0.23
UBR3-201ENST00000272793 EEPD1Q7L9B9 569 aa16.51■□□□□ 0.23
UBR3-201ENST00000272793 FAM9CQ8IZT9 166 aa16.51■□□□□ 0.23
UBR3-201ENST00000272793 NACC2Q96BF6 587 aa16.51■□□□□ 0.23
UBR3-201ENST00000272793 DLGAP2Q9P1A6 1054 aa16.51■□□□□ 0.23
UBR3-201ENST00000272793 ANAPC2Q9UJX6 822 aa16.51■□□□□ 0.23
UBR3-201ENST00000272793 MTMR6Q9Y217 621 aa16.51■□□□□ 0.23
UBR3-201ENST00000272793 GDAQ9Y2T3 454 aa16.51■□□□□ 0.23
UBR3-201ENST00000272793 DENND3A2RUS2 1198 aa16.51■□□□□ 0.23
UBR3-201ENST00000272793 USP17L12C9JPN9 530 aa16.51■□□□□ 0.23
UBR3-201ENST00000272793 USP17L21D6R901 530 aa16.51■□□□□ 0.23
UBR3-201ENST00000272793 SMNDC1O75940 238 aaKnown RBP eCLIP16.51■□□□□ 0.23
UBR3-201ENST00000272793 LBPP18428 481 aa16.51■□□□□ 0.23
UBR3-201ENST00000272793 CNTN1Q12860 1018 aa16.51■□□□□ 0.23
UBR3-201ENST00000272793 ABATP80404 500 aa16.5■□□□□ 0.23
UBR3-201ENST00000272793 ZNF235Q14590 738 aa16.5■□□□□ 0.23
UBR3-201ENST00000272793 SDE2Q6IQ49 451 aa16.5■□□□□ 0.23
UBR3-201ENST00000272793 NOL6Q9H6R4 1146 aaKnown RBP16.5■□□□□ 0.23
UBR3-201ENST00000272793 DDX56Q9NY93 547 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms