RNA–Protein interactions for RNA: ENST00000271971.6

CAPN9-201, Transcript of calpain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN9, Length 2,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-201ENST00000271971 FERP16591 822 aa13.47□□□□□ -0.25
CAPN9-201ENST00000271971 PRKCIP41743 596 aa13.47□□□□□ -0.25
CAPN9-201ENST00000271971 GNG11P61952 73 aa13.47□□□□□ -0.25
CAPN9-201ENST00000271971 TAF2Q6P1X5 1199 aa13.47□□□□□ -0.25
CAPN9-201ENST00000271971 RSRC2Q7L4I2 434 aaKnown RBP13.47□□□□□ -0.25
CAPN9-201ENST00000271971 OLIG1Q8TAK6 271 aa13.47□□□□□ -0.25
CAPN9-201ENST00000271971 JAKMIP2Q96AA8 810 aa13.47□□□□□ -0.25
CAPN9-201ENST00000271971 VTI1AQ96AJ9 217 aa13.47□□□□□ -0.25
CAPN9-201ENST00000271971 ADPGKQ9BRR6 497 aa13.47□□□□□ -0.25
CAPN9-201ENST00000271971 APOBEC3GQ9HC16 384 aaKnown RBP13.47□□□□□ -0.25
CAPN9-201ENST00000271971 C1orf112Q9NSG2 853 aa13.47□□□□□ -0.25
CAPN9-201ENST00000271971 GUCA1BQ9UMX6 200 aa13.47□□□□□ -0.25
CAPN9-201ENST00000271971 PIN4Q9Y237 131 aaKnown RBP13.47□□□□□ -0.25
CAPN9-201ENST00000271971 HES2Q9Y543 173 aa13.47□□□□□ -0.25
CAPN9-201ENST00000271971 PCDHA13Q9Y5I0 950 aa13.47□□□□□ -0.25
CAPN9-201ENST00000271971 LACTBL1A8MY62 500 aa13.46□□□□□ -0.25
CAPN9-201ENST00000271971 OAS2P29728 719 aaKnown RBP13.46□□□□□ -0.25
CAPN9-201ENST00000271971 CDC42EP1Q00587 391 aa13.46□□□□□ -0.25
CAPN9-201ENST00000271971 NCOA4Q13772 614 aa13.46□□□□□ -0.25
CAPN9-201ENST00000271971 SLC18A3Q16572 532 aa13.46□□□□□ -0.25
CAPN9-201ENST00000271971 CCDC122Q5T0U0 273 aa13.46□□□□□ -0.25
CAPN9-201ENST00000271971 RNF180Q86T96 592 aa13.46□□□□□ -0.25
CAPN9-201ENST00000271971 RABGGTAQ92696 567 aa13.46□□□□□ -0.25
CAPN9-201ENST00000271971 CXCL16Q9H2A7 254 aa13.46□□□□□ -0.25
CAPN9-201ENST00000271971 PDCD11Q14690 1871 aaKnown RBP13.46□□□□□ -0.25
CAPN9-201ENST00000271971 POLR3GO15318 223 aaPredicted RBP13.46□□□□□ -0.25
CAPN9-201ENST00000271971 CST3P01034 146 aaPredicted RBP13.46□□□□□ -0.25
CAPN9-201ENST00000271971 CLTAP09496 248 aa13.46□□□□□ -0.25
CAPN9-201ENST00000271971 TMEM191BP0C7N4 346 aa13.46□□□□□ -0.25
CAPN9-201ENST00000271971 VAV2P52735 878 aa13.46□□□□□ -0.25
CAPN9-201ENST00000271971 ACLYP53396 1101 aa13.46□□□□□ -0.25
CAPN9-201ENST00000271971 MRPS6P82932 125 aaKnown RBP13.46□□□□□ -0.25
CAPN9-201ENST00000271971 SMC1AQ14683 1233 aaKnown RBP13.46□□□□□ -0.25
CAPN9-201ENST00000271971 SLC10A6Q3KNW5 377 aa13.46□□□□□ -0.25
CAPN9-201ENST00000271971 LHX8Q68G74 356 aa13.46□□□□□ -0.25
CAPN9-201ENST00000271971 JADE1Q6IE81 842 aa13.46□□□□□ -0.25
CAPN9-201ENST00000271971 TRAPPC11Q7Z392 1133 aa13.46□□□□□ -0.25
CAPN9-201ENST00000271971 SERINC5Q86VE9 423 aa13.46□□□□□ -0.25
CAPN9-201ENST00000271971 PCSK9Q8NBP7 692 aaKnown RBP13.46□□□□□ -0.25
CAPN9-201ENST00000271971 SLC20A1Q8WUM9 679 aa13.46□□□□□ -0.25
CAPN9-201ENST00000271971 CARD6Q9BX69 1037 aa13.46□□□□□ -0.25
CAPN9-201ENST00000271971 HMX1Q9NP08 348 aaPredicted RBP13.46□□□□□ -0.25
CAPN9-201ENST00000271971 TRMT13Q9NUP7 481 aaKnown RBP13.46□□□□□ -0.25
CAPN9-201ENST00000271971 CDY2AQ9Y6F7 541 aa13.46□□□□□ -0.25
CAPN9-201ENST00000271971 MKI67P46013 3256 aaKnown RBP13.45□□□□□ -0.26
CAPN9-201ENST00000271971 URI1O94763 535 aaPredicted RBP13.45□□□□□ -0.26
CAPN9-201ENST00000271971 CALCAP01258 141 aa13.45□□□□□ -0.26
CAPN9-201ENST00000271971 CRYBB1P53674 252 aaPredicted RBP13.45□□□□□ -0.26
CAPN9-201ENST00000271971 MFAP3P55082 362 aa13.45□□□□□ -0.26
CAPN9-201ENST00000271971 NOP14P78316 857 aaKnown RBP13.45□□□□□ -0.26
CAPN9-201ENST00000271971 PTGISQ16647 500 aa13.45□□□□□ -0.26
CAPN9-201ENST00000271971 DUOXA2Q1HG44 320 aa13.45□□□□□ -0.26
CAPN9-201ENST00000271971 NOTUMQ6P988 496 aa13.45□□□□□ -0.26
CAPN9-201ENST00000271971 SLC27A1Q6PCB7 646 aa13.45□□□□□ -0.26
CAPN9-201ENST00000271971 LNX1Q8TBB1 728 aaPredicted RBP13.45□□□□□ -0.26
CAPN9-201ENST00000271971 SHC3Q92529 594 aa13.45□□□□□ -0.26
CAPN9-201ENST00000271971 PACSIN1Q9BY11 444 aa13.45□□□□□ -0.26
CAPN9-201ENST00000271971 CELF4Q9BZC1 486 aaKnown RBP13.45□□□□□ -0.26
CAPN9-201ENST00000271971 NXF3Q9H4D5 531 aaKnown RBP13.45□□□□□ -0.26
CAPN9-201ENST00000271971 RNF19AQ9NV58 838 aa13.45□□□□□ -0.26
CAPN9-201ENST00000271971 NUB1Q9Y5A7 615 aa13.45□□□□□ -0.26
CAPN9-201ENST00000271971 MACROD2A1Z1Q3 448 aa13.45□□□□□ -0.26
CAPN9-201ENST00000271971 CYP26A1O43174 497 aa13.45□□□□□ -0.26
CAPN9-201ENST00000271971 B4GALT4O60513 344 aa13.45□□□□□ -0.26
CAPN9-201ENST00000271971 MAGEA1P43355 309 aa13.45□□□□□ -0.26
CAPN9-201ENST00000271971 GUCY2FP51841 1108 aa13.45□□□□□ -0.26
CAPN9-201ENST00000271971 MYL6P60660 151 aa13.45□□□□□ -0.26
CAPN9-201ENST00000271971 ITGA7Q13683 1181 aa13.45□□□□□ -0.26
CAPN9-201ENST00000271971 WDR44Q5JSH3 913 aa13.45□□□□□ -0.26
CAPN9-201ENST00000271971 FAM228AQ86W67 206 aa13.45□□□□□ -0.26
CAPN9-201ENST00000271971 PALB2Q86YC2 1186 aa13.45□□□□□ -0.26
CAPN9-201ENST00000271971 GLYCTKQ8IVS8 523 aa13.45□□□□□ -0.26
CAPN9-201ENST00000271971 APOL6Q9BWW8 343 aa13.45□□□□□ -0.26
CAPN9-201ENST00000271971 OSBPL7Q9BZF2 842 aa13.45□□□□□ -0.26
CAPN9-201ENST00000271971 ARFGAP3Q9NP61 516 aa13.45□□□□□ -0.26
CAPN9-201ENST00000271971 SNTG2Q9NY99 539 aa13.45□□□□□ -0.26
CAPN9-201ENST00000271971 LCMT1Q9UIC8 334 aa13.45□□□□□ -0.26
CAPN9-201ENST00000271971 NOC2LQ9Y3T9 749 aaKnown RBP13.45□□□□□ -0.26
CAPN9-201ENST00000271971 DAAM1Q9Y4D1 1078 aa13.45□□□□□ -0.26
CAPN9-201ENST00000271971 BZW2Q9Y6E2 419 aaKnown RBP13.45□□□□□ -0.26
CAPN9-201ENST00000271971 MROH7Q68CQ1 1323 aa13.45□□□□□ -0.26
CAPN9-201ENST00000271971 DDX3XO00571 662 aaKnown RBP eCLIP13.44□□□□□ -0.26
CAPN9-201ENST00000271971 KIF5CO60282 957 aa13.44□□□□□ -0.26
CAPN9-201ENST00000271971 ZC3H11AO75152 810 aaKnown RBP eCLIP13.44□□□□□ -0.26
CAPN9-201ENST00000271971 SASH3O75995 380 aa13.44□□□□□ -0.26
CAPN9-201ENST00000271971 IL18RAPO95256 599 aa13.44□□□□□ -0.26
CAPN9-201ENST00000271971 SGPL1O95470 568 aa13.44□□□□□ -0.26
CAPN9-201ENST00000271971 NOP2P46087 812 aaKnown RBP13.44□□□□□ -0.26
CAPN9-201ENST00000271971 TUBB4BP68371 445 aa13.44□□□□□ -0.26
CAPN9-201ENST00000271971 ARHGEF6Q15052 776 aa13.44□□□□□ -0.26
CAPN9-201ENST00000271971 BRD3Q15059 726 aa13.44□□□□□ -0.26
CAPN9-201ENST00000271971 SURF1Q15526 300 aa13.44□□□□□ -0.26
CAPN9-201ENST00000271971 DCAF4L1Q3SXM0 396 aa13.44□□□□□ -0.26
CAPN9-201ENST00000271971 ZNF569Q5MCW4 686 aa13.44□□□□□ -0.26
CAPN9-201ENST00000271971 SLC47A2Q86VL8 602 aa13.44□□□□□ -0.26
CAPN9-201ENST00000271971 FAM71AQ8IYT1 594 aa13.44□□□□□ -0.26
CAPN9-201ENST00000271971 NME8Q8N427 588 aa13.44□□□□□ -0.26
CAPN9-201ENST00000271971 ACAP3Q96P50 834 aa13.44□□□□□ -0.26
CAPN9-201ENST00000271971 BEGAINQ9BUH8 593 aa13.44□□□□□ -0.26
CAPN9-201ENST00000271971 RASSF4Q9H2L5 321 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms