RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 KIAA0391O15091 583 aaKnown RBP17.02■□□□□ 0.31
MAP1LC3B-201ENST00000268607 HIP1RO75146 1068 aa17.02■□□□□ 0.31
MAP1LC3B-201ENST00000268607 SUN1O94901 812 aa17.02■□□□□ 0.31
MAP1LC3B-201ENST00000268607 RPL13P26373 211 aaKnown RBP17.02■□□□□ 0.31
MAP1LC3B-201ENST00000268607 HSD17B4P51659 736 aa17.02■□□□□ 0.31
MAP1LC3B-201ENST00000268607 GALCP54803 685 aa17.02■□□□□ 0.31
MAP1LC3B-201ENST00000268607 ZNF720Q7Z2F6 126 aa17.02■□□□□ 0.31
MAP1LC3B-201ENST00000268607 NCAPG2Q86XI2 1143 aa17.02■□□□□ 0.31
MAP1LC3B-201ENST00000268607 SLC17A8Q8NDX2 589 aa17.02■□□□□ 0.31
MAP1LC3B-201ENST00000268607 MKI67P46013 3256 aaKnown RBP17.01■□□□□ 0.31
MAP1LC3B-201ENST00000268607 TTC36A6NLP5 189 aa17.01■□□□□ 0.31
MAP1LC3B-201ENST00000268607 DDX3YO15523 660 aaKnown RBP17.01■□□□□ 0.31
MAP1LC3B-201ENST00000268607 ATP9AO75110 1047 aa17.01■□□□□ 0.31
MAP1LC3B-201ENST00000268607 TRIM49P0CI25 452 aa17.01■□□□□ 0.31
MAP1LC3B-201ENST00000268607 TRIM49CP0CI26 452 aa17.01■□□□□ 0.31
MAP1LC3B-201ENST00000268607 KRT13P13646 458 aa17.01■□□□□ 0.31
MAP1LC3B-201ENST00000268607 PCK1P35558 622 aa17.01■□□□□ 0.31
MAP1LC3B-201ENST00000268607 LACTBP83111 547 aaPredicted RBP17.01■□□□□ 0.31
MAP1LC3B-201ENST00000268607 AUHQ13825 339 aaKnown RBP17.01■□□□□ 0.31
MAP1LC3B-201ENST00000268607 BMT2Q1RMZ1 405 aa17.01■□□□□ 0.31
MAP1LC3B-201ENST00000268607 AADACL2Q6P093 401 aa17.01■□□□□ 0.31
MAP1LC3B-201ENST00000268607 GCNT4Q9P109 453 aa17.01■□□□□ 0.31
MAP1LC3B-201ENST00000268607 NKX1-2Q9UD57 310 aaPredicted RBP17.01■□□□□ 0.31
MAP1LC3B-201ENST00000268607 RLFQ13129 1914 aa17.01■□□□□ 0.31
MAP1LC3B-201ENST00000268607 RASGRF2O14827 1237 aa17.01■□□□□ 0.31
MAP1LC3B-201ENST00000268607 PGK2P07205 417 aa17.01■□□□□ 0.31
MAP1LC3B-201ENST00000268607 CREB1P16220 341 aa17.01■□□□□ 0.31
MAP1LC3B-201ENST00000268607 GAP43P17677 238 aa17.01■□□□□ 0.31
MAP1LC3B-201ENST00000268607 SPATA21Q7Z572 469 aa17.01■□□□□ 0.31
MAP1LC3B-201ENST00000268607 EXOC3L1Q86VI1 746 aa17.01■□□□□ 0.31
MAP1LC3B-201ENST00000268607 FAM186BQ8IYM0 893 aa17.01■□□□□ 0.31
MAP1LC3B-201ENST00000268607 DAW1Q8N136 415 aa17.01■□□□□ 0.31
MAP1LC3B-201ENST00000268607 SLC35G2Q8TBE7 412 aa17.01■□□□□ 0.31
MAP1LC3B-201ENST00000268607 C18orf8Q96DM3 657 aa17.01■□□□□ 0.31
MAP1LC3B-201ENST00000268607 C12orf42Q96LP6 360 aa17.01■□□□□ 0.31
MAP1LC3B-201ENST00000268607 TTC7AQ9ULT0 858 aaPredicted RBP17.01■□□□□ 0.31
MAP1LC3B-201ENST00000268607 NENFQ9UMX5 172 aa17.01■□□□□ 0.31
MAP1LC3B-201ENST00000268607 ABCB4P21439 1286 aa17■□□□□ 0.31
MAP1LC3B-201ENST00000268607 PPATQ06203 517 aa17■□□□□ 0.31
MAP1LC3B-201ENST00000268607 TKFCQ3LXA3 575 aa17■□□□□ 0.31
MAP1LC3B-201ENST00000268607 ARHGEF16Q5VV41 709 aa17■□□□□ 0.31
MAP1LC3B-201ENST00000268607 PADI6Q6TGC4 694 aa17■□□□□ 0.31
MAP1LC3B-201ENST00000268607 ASRGL1Q7L266 308 aa17■□□□□ 0.31
MAP1LC3B-201ENST00000268607 IFT74Q96LB3 600 aa17■□□□□ 0.31
MAP1LC3B-201ENST00000268607 GORASP1Q9BQQ3 440 aa17■□□□□ 0.31
MAP1LC3B-201ENST00000268607 PCIF1Q9H4Z3 704 aa17■□□□□ 0.31
MAP1LC3B-201ENST00000268607 HOXC10Q9NYD6 342 aa17■□□□□ 0.31
MAP1LC3B-201ENST00000268607 GRHL1Q9NZI5 618 aa17■□□□□ 0.31
MAP1LC3B-201ENST00000268607 A0A0A6YYK5 440 aaPredicted RBP17■□□□□ 0.31
MAP1LC3B-201ENST00000268607 DHX15O43143 795 aaKnown RBP17■□□□□ 0.31
MAP1LC3B-201ENST00000268607 PYGBP11216 843 aa17■□□□□ 0.31
MAP1LC3B-201ENST00000268607 CST9Q5W186 159 aa17■□□□□ 0.31
MAP1LC3B-201ENST00000268607 B3GNT9Q6UX72 402 aa17■□□□□ 0.31
MAP1LC3B-201ENST00000268607 ARHGAP22Q7Z5H3 698 aa17■□□□□ 0.31
MAP1LC3B-201ENST00000268607 VPS36Q86VN1 386 aa17■□□□□ 0.31
MAP1LC3B-201ENST00000268607 SYCP3Q8IZU3 236 aa17■□□□□ 0.31
MAP1LC3B-201ENST00000268607 GBP7Q8N8V2 638 aaPredicted RBP17■□□□□ 0.31
MAP1LC3B-201ENST00000268607 GINM1Q9NU53 330 aa17■□□□□ 0.31
MAP1LC3B-201ENST00000268607 FRMPD4Q14CM0 1322 aa16.99■□□□□ 0.31
MAP1LC3B-201ENST00000268607 A0A0G2JLL6 359 aaPredicted RBP16.99■□□□□ 0.31
MAP1LC3B-201ENST00000268607 FOXO6A8MYZ6 492 aa16.99■□□□□ 0.31
MAP1LC3B-201ENST00000268607 PRKCIP41743 596 aa16.99■□□□□ 0.31
MAP1LC3B-201ENST00000268607 RPL21P46778 160 aaKnown RBP16.99■□□□□ 0.31
MAP1LC3B-201ENST00000268607 MAPK7Q13164 816 aa16.99■□□□□ 0.31
MAP1LC3B-201ENST00000268607 MTMR1Q13613 665 aa16.99■□□□□ 0.31
MAP1LC3B-201ENST00000268607 TAOK1Q7L7X3 1001 aa16.99■□□□□ 0.31
MAP1LC3B-201ENST00000268607 PRRT2Q7Z6L0 340 aaPredicted RBP16.99■□□□□ 0.31
MAP1LC3B-201ENST00000268607 RMDN2Q96LZ7 410 aa16.99■□□□□ 0.31
MAP1LC3B-201ENST00000268607 PAIP2Q9BPZ3 127 aaKnown RBP16.99■□□□□ 0.31
MAP1LC3B-201ENST00000268607 TEX13BQ9BXU2 312 aa16.99■□□□□ 0.31
MAP1LC3B-201ENST00000268607 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.99■□□□□ 0.318e-8■■■■□ 25.6
MAP1LC3B-201ENST00000268607 ASB3Q9Y575 518 aa16.99■□□□□ 0.31
MAP1LC3B-201ENST00000268607 IGSF9BQ9UPX0 1349 aa16.99■□□□□ 0.31
MAP1LC3B-201ENST00000268607 FAM187AA6NFU0 413 aa16.99■□□□□ 0.31
MAP1LC3B-201ENST00000268607 RIPK2O43353 540 aa16.99■□□□□ 0.31
MAP1LC3B-201ENST00000268607 GFPT2O94808 682 aa16.99■□□□□ 0.31
MAP1LC3B-201ENST00000268607 MOGSQ13724 837 aa16.99■□□□□ 0.31
MAP1LC3B-201ENST00000268607 PGM5Q15124 567 aa16.99■□□□□ 0.31
MAP1LC3B-201ENST00000268607 RNF220Q5VTB9 566 aa16.99■□□□□ 0.31
MAP1LC3B-201ENST00000268607 ANKRD35Q8N283 1001 aa16.99■□□□□ 0.31
MAP1LC3B-201ENST00000268607 ANKRD42Q8N9B4 389 aa16.99■□□□□ 0.31
MAP1LC3B-201ENST00000268607 GDAP1Q8TB36 358 aa16.99■□□□□ 0.31
MAP1LC3B-201ENST00000268607 ZFAND2BQ8WV99 257 aa16.99■□□□□ 0.31
MAP1LC3B-201ENST00000268607 GPRC5CQ9NQ84 441 aa16.99■□□□□ 0.31
MAP1LC3B-201ENST00000268607 WDR35Q9P2L0 1181 aa16.99■□□□□ 0.31
MAP1LC3B-201ENST00000268607 LRRC42Q9Y546 428 aa16.99■□□□□ 0.31
MAP1LC3B-201ENST00000268607 LGR5O75473 907 aa16.98■□□□□ 0.31
MAP1LC3B-201ENST00000268607 NPTXRO95502 500 aa16.98■□□□□ 0.31
MAP1LC3B-201ENST00000268607 PSMC2P35998 433 aaKnown RBP16.98■□□□□ 0.31
MAP1LC3B-201ENST00000268607 NPEPPSP55786 919 aa16.98■□□□□ 0.31
MAP1LC3B-201ENST00000268607 POLE2P56282 527 aa16.98■□□□□ 0.31
MAP1LC3B-201ENST00000268607 UGCGQ16739 394 aa16.98■□□□□ 0.31
MAP1LC3B-201ENST00000268607 LONRF1Q17RB8 773 aa16.98■□□□□ 0.31
MAP1LC3B-201ENST00000268607 HS2ST1Q7LGA3 356 aa16.98■□□□□ 0.31
MAP1LC3B-201ENST00000268607 RPS6KC1Q96S38 1066 aa16.98■□□□□ 0.31
MAP1LC3B-201ENST00000268607 RIT2Q99578 217 aa16.98■□□□□ 0.31
MAP1LC3B-201ENST00000268607 METTL14Q9HCE5 456 aaKnown RBP16.98■□□□□ 0.31
MAP1LC3B-201ENST00000268607 SIX2Q9NPC8 291 aa16.98■□□□□ 0.31
MAP1LC3B-201ENST00000268607 AGPAT3Q9NRZ7 376 aa16.98■□□□□ 0.31
MAP1LC3B-201ENST00000268607 ADAMTS5Q9UNA0 930 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms