RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 TEX33O43247 280 aa26.33■■□□□ 1.81
SCN1B-201ENST00000262631 LRRN2O75325 713 aa26.33■■□□□ 1.81
SCN1B-201ENST00000262631 GJB5O95377 273 aa26.33■■□□□ 1.81
SCN1B-201ENST00000262631 PTPN21Q16825 1174 aa26.33■■□□□ 1.81
SCN1B-201ENST00000262631 KRT39Q6A163 491 aa26.33■■□□□ 1.81
SCN1B-201ENST00000262631 URGCPQ8TCY9 931 aa26.33■■□□□ 1.81
SCN1B-201ENST00000262631 RTN4Q9NQC3 1192 aaKnown RBP26.33■■□□□ 1.81
SCN1B-201ENST00000262631 DPP3Q9NY33 737 aa26.33■■□□□ 1.81
SCN1B-201ENST00000262631 SIX4Q9UIU6 781 aa26.33■■□□□ 1.81
SCN1B-201ENST00000262631 UBQLN1Q9UMX0 589 aaKnown RBP26.33■■□□□ 1.81
SCN1B-201ENST00000262631 STX10O60499 249 aa26.32■■□□□ 1.8
SCN1B-201ENST00000262631 DDHD2O94830 711 aa26.32■■□□□ 1.8
SCN1B-201ENST00000262631 VNN1O95497 513 aa26.32■■□□□ 1.8
SCN1B-201ENST00000262631 TNNC2P02585 160 aa26.32■■□□□ 1.8
SCN1B-201ENST00000262631 ATP2A2P16615 1042 aaKnown RBP26.32■■□□□ 1.8
SCN1B-201ENST00000262631 UBASH3AP57075 661 aa26.32■■□□□ 1.8
SCN1B-201ENST00000262631 BIRC3Q13489 604 aa26.32■■□□□ 1.8
SCN1B-201ENST00000262631 TAS1R2Q8TE23 839 aa26.32■■□□□ 1.8
SCN1B-201ENST00000262631 CACTINQ8WUQ7 758 aaKnown RBP26.32■■□□□ 1.8
SCN1B-201ENST00000262631 RNPC3Q96LT9 517 aaKnown RBP26.32■■□□□ 1.8
SCN1B-201ENST00000262631 TSPAN18Q96SJ8 248 aa26.32■■□□□ 1.8
SCN1B-201ENST00000262631 MTIF3Q9H2K0 278 aaKnown RBP26.32■■□□□ 1.8
SCN1B-201ENST00000262631 GRPEL1Q9HAV7 217 aa26.32■■□□□ 1.8
SCN1B-201ENST00000262631 CST3P01034 146 aaPredicted RBP26.31■■□□□ 1.8
SCN1B-201ENST00000262631 TPM2P07951 284 aa26.31■■□□□ 1.8
SCN1B-201ENST00000262631 AP3M2P53677 418 aa26.31■■□□□ 1.8
SCN1B-201ENST00000262631 MYL7Q01449 175 aa26.31■■□□□ 1.8
SCN1B-201ENST00000262631 SARM1Q6SZW1 724 aa26.31■■□□□ 1.8
SCN1B-201ENST00000262631 HERC6Q8IVU3 1022 aa26.31■■□□□ 1.8
SCN1B-201ENST00000262631 BEST2Q8NFU1 509 aa26.31■■□□□ 1.8
SCN1B-201ENST00000262631 ELMO3Q96BJ8 720 aa26.31■■□□□ 1.8
SCN1B-201ENST00000262631 SLC9A7Q96T83 725 aa26.31■■□□□ 1.8
SCN1B-201ENST00000262631 PAAF1Q9BRP4 392 aa26.31■■□□□ 1.8
SCN1B-201ENST00000262631 XPO4Q9C0E2 1151 aaKnown RBP26.31■■□□□ 1.8
SCN1B-201ENST00000262631 SLC38A7Q9NVC3 462 aa26.31■■□□□ 1.8
SCN1B-201ENST00000262631 CASTOR2A6NHX0 329 aa26.31■■□□□ 1.8
SCN1B-201ENST00000262631 PPEF2O14830 753 aa26.31■■□□□ 1.8
SCN1B-201ENST00000262631 ITGB3P05106 788 aa26.31■■□□□ 1.8
SCN1B-201ENST00000262631 NR1I3Q14994 352 aa26.31■■□□□ 1.8
SCN1B-201ENST00000262631 FAM109BQ6ICB4 259 aaPredicted RBP26.31■■□□□ 1.8
SCN1B-201ENST00000262631 RABGGTAQ92696 567 aa26.31■■□□□ 1.8
SCN1B-201ENST00000262631 SEMA4DQ92854 862 aa26.31■■□□□ 1.8
SCN1B-201ENST00000262631 CRACR2AQ9BSW2 395 aa26.31■■□□□ 1.8
SCN1B-201ENST00000262631 KANSL3Q9P2N6 904 aa26.31■■□□□ 1.8
SCN1B-201ENST00000262631 PDCD11Q14690 1871 aaKnown RBP26.3■■□□□ 1.8
SCN1B-201ENST00000262631 CYP3A5P20815 502 aa26.3■■□□□ 1.8
SCN1B-201ENST00000262631 IGFBP6P24592 240 aaPredicted RBP26.3■■□□□ 1.8
SCN1B-201ENST00000262631 UBXN1Q04323 297 aa26.3■■□□□ 1.8
SCN1B-201ENST00000262631 RNASELQ05823 741 aaKnown RBP26.3■■□□□ 1.8
SCN1B-201ENST00000262631 DSC1Q08554 894 aa26.3■■□□□ 1.8
SCN1B-201ENST00000262631 PHOSPHO2Q8TCD6 241 aa26.3■■□□□ 1.8
SCN1B-201ENST00000262631 YME1L1Q96TA2 773 aa26.3■■□□□ 1.8
SCN1B-201ENST00000262631 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.3■■□□□ 1.8
SCN1B-201ENST00000262631 DNAJB4Q9UDY4 337 aa26.3■■□□□ 1.8
SCN1B-201ENST00000262631 PMM2O15305 246 aa26.29■■□□□ 1.8
SCN1B-201ENST00000262631 POLR2BP30876 1174 aaKnown RBP26.29■■□□□ 1.8
SCN1B-201ENST00000262631 HTRA4P83105 476 aaPredicted RBP26.29■■□□□ 1.8
SCN1B-201ENST00000262631 FILIP1LQ4L180 1135 aa26.29■■□□□ 1.8
SCN1B-201ENST00000262631 ITGA11Q9UKX5 1188 aa26.29■■□□□ 1.8
SCN1B-201ENST00000262631 COQ4Q9Y3A0 265 aa26.29■■□□□ 1.8
SCN1B-201ENST00000262631 XPOTO43592 962 aaKnown RBP26.28■■□□□ 1.8
SCN1B-201ENST00000262631 PHACTR2O75167 634 aa26.28■■□□□ 1.8
SCN1B-201ENST00000262631 HLA-DRAP01903 254 aa26.28■■□□□ 1.8
SCN1B-201ENST00000262631 KRT19P08727 400 aa26.28■■□□□ 1.8
SCN1B-201ENST00000262631 MLLT1Q03111 559 aaPredicted RBP26.28■■□□□ 1.8
SCN1B-201ENST00000262631 TUSC3Q13454 348 aa26.28■■□□□ 1.8
SCN1B-201ENST00000262631 NCOA4Q13772 614 aa26.28■■□□□ 1.8
SCN1B-201ENST00000262631 EPC2Q52LR7 807 aa26.28■■□□□ 1.8
SCN1B-201ENST00000262631 C9orf57Q5W0N0 161 aa26.28■■□□□ 1.8
SCN1B-201ENST00000262631 COLGALT2Q8IYK4 626 aa26.28■■□□□ 1.8
SCN1B-201ENST00000262631 LRRC43Q8N309 656 aa26.28■■□□□ 1.8
SCN1B-201ENST00000262631 ZBED2Q9BTP6 218 aa26.28■■□□□ 1.8
SCN1B-201ENST00000262631 MRPL9Q9BYD2 267 aaKnown RBP26.28■■□□□ 1.8
SCN1B-201ENST00000262631 NRDE2Q9H7Z3 1164 aa26.28■■□□□ 1.8
SCN1B-201ENST00000262631 FNDC1Q4ZHG4 1894 aaPredicted RBP26.28■■□□□ 1.8
SCN1B-201ENST00000262631 PDE4DIPQ5VU43 2346 aa26.28■■□□□ 1.8
SCN1B-201ENST00000262631 ANO9A1A5B4 782 aa26.28■■□□□ 1.8
SCN1B-201ENST00000262631 GRXCR1A8MXD5 290 aa26.28■■□□□ 1.8
SCN1B-201ENST00000262631 P4HA2O15460 535 aa26.28■■□□□ 1.8
SCN1B-201ENST00000262631 N4BP1O75113 896 aaKnown RBP26.28■■□□□ 1.8
SCN1B-201ENST00000262631 CLCNKBP51801 687 aa26.28■■□□□ 1.8
SCN1B-201ENST00000262631 KCNMA1Q12791 1236 aa26.28■■□□□ 1.8
SCN1B-201ENST00000262631 FBXL13Q8NEE6 735 aa26.28■■□□□ 1.8
SCN1B-201ENST00000262631 LMO3Q8TAP4 145 aa26.28■■□□□ 1.8
SCN1B-201ENST00000262631 PI4K2AQ9BTU6 479 aa26.28■■□□□ 1.8
SCN1B-201ENST00000262631 TRIM5Q9C035 493 aa26.28■■□□□ 1.8
SCN1B-201ENST00000262631 GCNT4Q9P109 453 aa26.28■■□□□ 1.8
SCN1B-201ENST00000262631 AGAP1Q9UPQ3 857 aa26.28■■□□□ 1.8
SCN1B-201ENST00000262631 LRPAP1P30533 357 aa26.27■■□□□ 1.8
SCN1B-201ENST00000262631 PIK3CAP42336 1068 aa26.27■■□□□ 1.8
SCN1B-201ENST00000262631 KLK7P49862 253 aa26.27■■□□□ 1.8
SCN1B-201ENST00000262631 MYL6P60660 151 aa26.27■■□□□ 1.8
SCN1B-201ENST00000262631 APBA1Q02410 837 aa26.27■■□□□ 1.8
SCN1B-201ENST00000262631 FKBP15Q5T1M5 1219 aa26.27■■□□□ 1.8
SCN1B-201ENST00000262631 RSPH1Q8WYR4 309 aa26.27■■□□□ 1.8
SCN1B-201ENST00000262631 CWH43Q9H720 699 aa26.27■■□□□ 1.8
SCN1B-201ENST00000262631 RAB20Q9NX57 234 aa26.27■■□□□ 1.8
SCN1B-201ENST00000262631 GTPBP10A4D1E9 387 aaKnown RBP26.26■■□□□ 1.79
SCN1B-201ENST00000262631 F8W810 466 aa26.26■■□□□ 1.79
SCN1B-201ENST00000262631 ZC3H11AO75152 810 aaKnown RBP eCLIP26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms