RNA–Protein interactions for RNA: ENST00000260383.11

TUBGCP4-201, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUBGCP4, Length 2,617 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-201ENST00000260383 C12orf50Q8NA57 414 aaPredicted RBP14.11□□□□□ -0.15
TUBGCP4-201ENST00000260383 TMEM47Q9BQJ4 181 aa14.11□□□□□ -0.15
TUBGCP4-201ENST00000260383 CCDC77Q9BR77 488 aa14.11□□□□□ -0.15
TUBGCP4-201ENST00000260383 ARMCX1Q9P291 453 aa14.11□□□□□ -0.15
TUBGCP4-201ENST00000260383 ANKRD36CQ5JPF3 1778 aa14.1□□□□□ -0.15
TUBGCP4-201ENST00000260383 UBR2Q8IWV8 1755 aa14.1□□□□□ -0.15
TUBGCP4-201ENST00000260383 RARBP10826 455 aa14.1□□□□□ -0.15
TUBGCP4-201ENST00000260383 ESRRAP11474 423 aaPredicted RBP14.1□□□□□ -0.15
TUBGCP4-201ENST00000260383 NR1H3Q13133 447 aa14.1□□□□□ -0.15
TUBGCP4-201ENST00000260383 FYB2Q5VWT5 728 aa14.1□□□□□ -0.15
TUBGCP4-201ENST00000260383 SLC25A41Q8N5S1 370 aa14.1□□□□□ -0.15
TUBGCP4-201ENST00000260383 SLC35B4Q969S0 331 aa14.1□□□□□ -0.15
TUBGCP4-201ENST00000260383 PANX3Q96QZ0 392 aa14.1□□□□□ -0.15
TUBGCP4-201ENST00000260383 HERPUD2Q9BSE4 406 aa14.1□□□□□ -0.15
TUBGCP4-201ENST00000260383 UBA5Q9GZZ9 404 aa14.1□□□□□ -0.15
TUBGCP4-201ENST00000260383 MAF1Q9H063 256 aa14.1□□□□□ -0.15
TUBGCP4-201ENST00000260383 ALG13Q9NP73 1137 aaKnown RBP14.1□□□□□ -0.15
TUBGCP4-201ENST00000260383 ARHGEF4Q9NR80 690 aa14.1□□□□□ -0.15
TUBGCP4-201ENST00000260383 MCM9Q9NXL9 1143 aa14.1□□□□□ -0.15
TUBGCP4-201ENST00000260383 STRCQ7RTU9 1775 aa14.1□□□□□ -0.15
TUBGCP4-201ENST00000260383 EXOC1LA0A1B0GW35 172 aa14.1□□□□□ -0.15
TUBGCP4-201ENST00000260383 GSTTP1A0A1W2PQM5 241 aa14.1□□□□□ -0.15
TUBGCP4-201ENST00000260383 RBM47A0AV96 593 aaKnown RBP14.1□□□□□ -0.15
TUBGCP4-201ENST00000260383 SPDYE16A6NNV3 312 aaPredicted RBP14.1□□□□□ -0.15
TUBGCP4-201ENST00000260383 A8MXQ7 604 aa14.1□□□□□ -0.15
TUBGCP4-201ENST00000260383 VILLO15195 856 aa14.1□□□□□ -0.15
TUBGCP4-201ENST00000260383 BUD23O43709 281 aaKnown RBP14.1□□□□□ -0.15
TUBGCP4-201ENST00000260383 NR3C1P04150 777 aa14.1□□□□□ -0.15
TUBGCP4-201ENST00000260383 ADARP55265 1226 aaKnown RBP14.1□□□□□ -0.15
TUBGCP4-201ENST00000260383 MEX3CQ5U5Q3 659 aaKnown RBP14.1□□□□□ -0.15
TUBGCP4-201ENST00000260383 ISLR2Q6UXK2 745 aa14.1□□□□□ -0.15
TUBGCP4-201ENST00000260383 RIPOR1Q6ZS17 1223 aa14.1□□□□□ -0.15
TUBGCP4-201ENST00000260383 CAPN12Q6ZSI9 719 aa14.1□□□□□ -0.15
TUBGCP4-201ENST00000260383 ACAD11Q709F0 780 aa14.1□□□□□ -0.15
TUBGCP4-201ENST00000260383 ZBTB8BQ8NAP8 495 aaPredicted RBP14.1□□□□□ -0.15
TUBGCP4-201ENST00000260383 SHKBP1Q8TBC3 707 aa14.1□□□□□ -0.15
TUBGCP4-201ENST00000260383 HAUS1Q96CS2 278 aa14.1□□□□□ -0.15
TUBGCP4-201ENST00000260383 FAM118BQ9BPY3 351 aa14.1□□□□□ -0.15
TUBGCP4-201ENST00000260383 NDE1Q9NXR1 346 aa14.1□□□□□ -0.15
TUBGCP4-201ENST00000260383 ANKFY1Q9P2R3 1169 aa14.1□□□□□ -0.15
TUBGCP4-201ENST00000260383 BCS1LQ9Y276 419 aa14.1□□□□□ -0.15
TUBGCP4-201ENST00000260383 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.1□□□□□ -0.15
TUBGCP4-201ENST00000260383 ERVV-2B6SEH9 535 aa14.09□□□□□ -0.15
TUBGCP4-201ENST00000260383 ATP9BO43861 1147 aa14.09□□□□□ -0.15
TUBGCP4-201ENST00000260383 STK10O94804 968 aaKnown RBP14.09□□□□□ -0.15
TUBGCP4-201ENST00000260383 GAS8O95995 478 aa14.09□□□□□ -0.15
TUBGCP4-201ENST00000260383 ADRA1DP25100 572 aa14.09□□□□□ -0.15
TUBGCP4-201ENST00000260383 RFC4P35249 363 aa14.09□□□□□ -0.15
TUBGCP4-201ENST00000260383 HADHBP55084 474 aaKnown RBP14.09□□□□□ -0.15
TUBGCP4-201ENST00000260383 SCUBE1Q8IWY4 988 aa14.09□□□□□ -0.15
TUBGCP4-201ENST00000260383 SYT2Q8N9I0 419 aaPredicted RBP14.09□□□□□ -0.15
TUBGCP4-201ENST00000260383 SLC44A5Q8NCS7 719 aa14.09□□□□□ -0.15
TUBGCP4-201ENST00000260383 LZICQ8WZA0 190 aa14.09□□□□□ -0.15
TUBGCP4-201ENST00000260383 COA7Q96BR5 231 aa14.09□□□□□ -0.15
TUBGCP4-201ENST00000260383 MAK16Q9BXY0 300 aaKnown RBP14.09□□□□□ -0.15
TUBGCP4-201ENST00000260383 FOXN3O00409 490 aaPredicted RBP14.09□□□□□ -0.15
TUBGCP4-201ENST00000260383 SPOPO43791 374 aa14.09□□□□□ -0.15
TUBGCP4-201ENST00000260383 TYROBPO43914 113 aa14.09□□□□□ -0.15
TUBGCP4-201ENST00000260383 TROVE2P10155 538 aaKnown RBP eCLIP14.09□□□□□ -0.15
TUBGCP4-201ENST00000260383 CDK4P11802 303 aa14.09□□□□□ -0.15
TUBGCP4-201ENST00000260383 ATF2P15336 505 aa14.09□□□□□ -0.15
TUBGCP4-201ENST00000260383 VARSP26640 1264 aaKnown RBP14.09□□□□□ -0.15
TUBGCP4-201ENST00000260383 ZBTB16Q05516 673 aa14.09□□□□□ -0.15
TUBGCP4-201ENST00000260383 SFT2D3Q587I9 215 aa14.09□□□□□ -0.15
TUBGCP4-201ENST00000260383 DNAJC14Q6Y2X3 702 aaPredicted RBP14.09□□□□□ -0.15
TUBGCP4-201ENST00000260383 LRRC6Q86X45 466 aa14.09□□□□□ -0.15
TUBGCP4-201ENST00000260383 SFR1Q86XK3 245 aa14.09□□□□□ -0.15
TUBGCP4-201ENST00000260383 CATSPER2Q96P56 530 aa14.09□□□□□ -0.15
TUBGCP4-201ENST00000260383 PHF12Q96QT6 1004 aa14.09□□□□□ -0.15
TUBGCP4-201ENST00000260383 AGPAT1Q99943 283 aa14.09□□□□□ -0.15
TUBGCP4-201ENST00000260383 POLR3CQ9BUI4 534 aaPredicted RBP14.09□□□□□ -0.15
TUBGCP4-201ENST00000260383 WNT8AQ9H1J5 351 aa14.09□□□□□ -0.15
TUBGCP4-201ENST00000260383 KCNK13Q9HB14 408 aa14.09□□□□□ -0.15
TUBGCP4-201ENST00000260383 TUBGCP4Q9UGJ1 667 aa14.09□□□□□ -0.15
TUBGCP4-201ENST00000260383 WNK3Q9BYP7 1800 aa14.08□□□□□ -0.16
TUBGCP4-201ENST00000260383 ASTN1O14525 1302 aa14.08□□□□□ -0.16
TUBGCP4-201ENST00000260383 FRMPD4Q14CM0 1322 aa14.08□□□□□ -0.16
TUBGCP4-201ENST00000260383 LRP5O75197 1615 aa14.08□□□□□ -0.16
TUBGCP4-201ENST00000260383 GYS1P13807 737 aa14.08□□□□□ -0.16
TUBGCP4-201ENST00000260383 ATF3P18847 181 aa14.08□□□□□ -0.16
TUBGCP4-201ENST00000260383 EMP3P54852 163 aa14.08□□□□□ -0.16
TUBGCP4-201ENST00000260383 MECOMQ03112 1051 aa14.08□□□□□ -0.16
TUBGCP4-201ENST00000260383 SULT2A1Q06520 285 aa14.08□□□□□ -0.16
TUBGCP4-201ENST00000260383 RBM44Q6ZP01 1051 aaKnown RBP14.08□□□□□ -0.16
TUBGCP4-201ENST00000260383 ZNF554Q86TJ5 538 aa14.08□□□□□ -0.16
TUBGCP4-201ENST00000260383 RASSF3Q86WH2 238 aa14.08□□□□□ -0.16
TUBGCP4-201ENST00000260383 ZNF276Q8N554 614 aa14.08□□□□□ -0.16
TUBGCP4-201ENST00000260383 SLCO2A1Q92959 643 aa14.08□□□□□ -0.16
TUBGCP4-201ENST00000260383 SKA1Q96BD8 255 aa14.08□□□□□ -0.16
TUBGCP4-201ENST00000260383 NSUN4Q96CB9 384 aaKnown RBP14.08□□□□□ -0.16
TUBGCP4-201ENST00000260383 TRAIPQ9BWF2 469 aa14.08□□□□□ -0.16
TUBGCP4-201ENST00000260383 CRNKL1Q9BZJ0 848 aaKnown RBP14.08□□□□□ -0.16
TUBGCP4-201ENST00000260383 ACP6Q9NPH0 428 aa14.08□□□□□ -0.16
TUBGCP4-201ENST00000260383 ARHGEF38Q9NXL2 777 aa14.08□□□□□ -0.16
TUBGCP4-201ENST00000260383 B2RBV5 119 aa14.08□□□□□ -0.16
TUBGCP4-201ENST00000260383 ADAMTS2O95450 1211 aa14.08□□□□□ -0.16
TUBGCP4-201ENST00000260383 MAGEA4P43358 317 aa14.08□□□□□ -0.16
TUBGCP4-201ENST00000260383 CD151P48509 253 aa14.08□□□□□ -0.16
TUBGCP4-201ENST00000260383 TNNI2P48788 182 aa14.08□□□□□ -0.16
TUBGCP4-201ENST00000260383 RAP1GDS1P52306 607 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms