RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 BICD1Q96G01 975 aa20.77■□□□□ 0.92
TM6SF1-201ENST00000258909 RPP25Q9BUL9 199 aaKnown RBP20.77■□□□□ 0.92
TM6SF1-201ENST00000258909 BLOC1S4Q9NUP1 217 aa20.77■□□□□ 0.92
TM6SF1-201ENST00000258909 LARSQ9P2J5 1176 aaKnown RBP20.77■□□□□ 0.92
TM6SF1-201ENST00000258909 TUBGCP4Q9UGJ1 667 aa20.77■□□□□ 0.92
TM6SF1-201ENST00000258909 KCNG1Q9UIX4 513 aa20.77■□□□□ 0.92
TM6SF1-201ENST00000258909 CA14Q9ULX7 337 aa20.77■□□□□ 0.92
TM6SF1-201ENST00000258909 NUB1Q9Y5A7 615 aa20.77■□□□□ 0.92
TM6SF1-201ENST00000258909 NUMBLQ9Y6R0 609 aa20.77■□□□□ 0.92
TM6SF1-201ENST00000258909 VPS13AQ96RL7 3174 aa20.77■□□□□ 0.92
TM6SF1-201ENST00000258909 DMDP11532 3685 aa20.77■□□□□ 0.92
TM6SF1-201ENST00000258909 KRBA1A5PL33 1030 aa20.76■□□□□ 0.91
TM6SF1-201ENST00000258909 XYLBO75191 536 aa20.76■□□□□ 0.91
TM6SF1-201ENST00000258909 CXCL8P10145 99 aa20.76■□□□□ 0.91
TM6SF1-201ENST00000258909 NCKAP1LP55160 1127 aa20.76■□□□□ 0.91
TM6SF1-201ENST00000258909 HTR4Q13639 388 aa20.76■□□□□ 0.91
TM6SF1-201ENST00000258909 MCM6Q14566 821 aa20.76■□□□□ 0.91
TM6SF1-201ENST00000258909 RASSF8Q8NHQ8 419 aa20.76■□□□□ 0.91
TM6SF1-201ENST00000258909 ANHXE9PGG2 379 aa20.75■□□□□ 0.91
TM6SF1-201ENST00000258909 STK25O00506 426 aa20.75■□□□□ 0.91
TM6SF1-201ENST00000258909 PLCG1P19174 1290 aa20.75■□□□□ 0.91
TM6SF1-201ENST00000258909 HOXA9P31269 272 aa20.75■□□□□ 0.91
TM6SF1-201ENST00000258909 TNFSF9P41273 254 aa20.75■□□□□ 0.91
TM6SF1-201ENST00000258909 NUBP1P53384 320 aa20.75■□□□□ 0.91
TM6SF1-201ENST00000258909 ROR1Q01973 937 aa20.75■□□□□ 0.91
TM6SF1-201ENST00000258909 MCL1Q07820 350 aa20.75■□□□□ 0.91
TM6SF1-201ENST00000258909 PARM1Q6UWI2 310 aa20.75■□□□□ 0.91
TM6SF1-201ENST00000258909 BRAPQ7Z569 592 aa20.75■□□□□ 0.91
TM6SF1-201ENST00000258909 MYCT1Q8N699 235 aa20.75■□□□□ 0.91
TM6SF1-201ENST00000258909 GPR152Q8TDT2 470 aa20.75■□□□□ 0.91
TM6SF1-201ENST00000258909 FGF13Q92913 245 aa20.75■□□□□ 0.91
TM6SF1-201ENST00000258909 FGF14Q92915 247 aa20.75■□□□□ 0.91
TM6SF1-201ENST00000258909 NXPE3Q969Y0 559 aa20.75■□□□□ 0.91
TM6SF1-201ENST00000258909 ZHX3Q9H4I2 956 aa20.75■□□□□ 0.91
TM6SF1-201ENST00000258909 DNMT3BQ9UBC3 853 aaKnown RBP20.75■□□□□ 0.91
TM6SF1-201ENST00000258909 WNT16Q9UBV4 365 aa20.75■□□□□ 0.91
TM6SF1-201ENST00000258909 CDH7Q9ULB5 785 aa20.75■□□□□ 0.91
TM6SF1-201ENST00000258909 FAM13AO94988 1023 aa20.75■□□□□ 0.91
TM6SF1-201ENST00000258909 KRT18P05783 430 aaKnown RBP20.75■□□□□ 0.91
TM6SF1-201ENST00000258909 SRFP11831 508 aa20.75■□□□□ 0.91
TM6SF1-201ENST00000258909 AOC1P19801 751 aa20.75■□□□□ 0.91
TM6SF1-201ENST00000258909 RPL9P32969 192 aaKnown RBP20.75■□□□□ 0.91
TM6SF1-201ENST00000258909 CUL4AQ13619 759 aa20.75■□□□□ 0.91
TM6SF1-201ENST00000258909 UVSSAQ2YD98 709 aa20.75■□□□□ 0.91
TM6SF1-201ENST00000258909 SPECC1Q5M775 1068 aa20.75■□□□□ 0.91
TM6SF1-201ENST00000258909 RAD54LQ92698 747 aa20.75■□□□□ 0.91
TM6SF1-201ENST00000258909 ODF2LQ9ULJ1 636 aa20.75■□□□□ 0.91
TM6SF1-201ENST00000258909 MYH15Q9Y2K3 1946 aa20.74■□□□□ 0.91
TM6SF1-201ENST00000258909 WDR27A2RRH5 827 aa20.74■□□□□ 0.91
TM6SF1-201ENST00000258909 K7ENM7 598 aa20.74■□□□□ 0.91
TM6SF1-201ENST00000258909 MCM4P33991 863 aa20.74■□□□□ 0.91
TM6SF1-201ENST00000258909 LONP1P36776 959 aaKnown RBP20.74■□□□□ 0.91
TM6SF1-201ENST00000258909 LIG4P49917 911 aa20.74■□□□□ 0.91
TM6SF1-201ENST00000258909 ZBTB41Q5SVQ8 909 aa20.74■□□□□ 0.91
TM6SF1-201ENST00000258909 SLC8B1Q6J4K2 584 aa20.74■□□□□ 0.91
TM6SF1-201ENST00000258909 ING5Q8WYH8 240 aa20.74■□□□□ 0.91
TM6SF1-201ENST00000258909 IRF2BPLQ9H1B7 796 aa20.74■□□□□ 0.91
TM6SF1-201ENST00000258909 TBX20Q9UMR3 447 aa20.74■□□□□ 0.91
TM6SF1-201ENST00000258909 CLIC4Q9Y696 253 aa20.74■□□□□ 0.91
TM6SF1-201ENST00000258909 H0YCG3 227 aa20.73■□□□□ 0.91
TM6SF1-201ENST00000258909 SYN3O14994 580 aa20.73■□□□□ 0.91
TM6SF1-201ENST00000258909 SLC26A4O43511 780 aa20.73■□□□□ 0.91
TM6SF1-201ENST00000258909 BMP15O95972 392 aa20.73■□□□□ 0.91
TM6SF1-201ENST00000258909 CLTAP09496 248 aa20.73■□□□□ 0.91
TM6SF1-201ENST00000258909 PABPC1LQ4VXU2 614 aaKnown RBP20.73■□□□□ 0.91
TM6SF1-201ENST00000258909 FAM173BQ6P4H8 233 aa20.73■□□□□ 0.91
TM6SF1-201ENST00000258909 USP49Q70CQ1 688 aa20.73■□□□□ 0.91
TM6SF1-201ENST00000258909 ZNF461Q8TAF7 563 aa20.73■□□□□ 0.91
TM6SF1-201ENST00000258909 EPSTI1Q96J88 318 aa20.73■□□□□ 0.91
TM6SF1-201ENST00000258909 PARVGQ9HBI0 331 aa20.73■□□□□ 0.91
TM6SF1-201ENST00000258909 FBXL5Q9UKA1 691 aa20.73■□□□□ 0.91
TM6SF1-201ENST00000258909 ZFP37Q9Y6Q3 630 aaPredicted RBP20.73■□□□□ 0.91
TM6SF1-201ENST00000258909 PRRG1O14668 218 aa20.72■□□□□ 0.91
TM6SF1-201ENST00000258909 HNRNPDLO14979 420 aaKnown RBP20.72■□□□□ 0.91
TM6SF1-201ENST00000258909 TRAK2O60296 914 aa20.72■□□□□ 0.91
TM6SF1-201ENST00000258909 TBC1D4O60343 1298 aa20.72■□□□□ 0.91
TM6SF1-201ENST00000258909 ABLIM3O94929 683 aa20.72■□□□□ 0.91
TM6SF1-201ENST00000258909 RFX1P22670 979 aa20.72■□□□□ 0.91
TM6SF1-201ENST00000258909 MARCKSP29966 332 aaPredicted RBP20.72■□□□□ 0.91
TM6SF1-201ENST00000258909 ELF1P32519 619 aa20.72■□□□□ 0.91
TM6SF1-201ENST00000258909 GUCY2FP51841 1108 aa20.72■□□□□ 0.91
TM6SF1-201ENST00000258909 MRPL58Q14197 206 aaKnown RBP20.72■□□□□ 0.91
TM6SF1-201ENST00000258909 CTXN3Q4LDR2 81 aa20.72■□□□□ 0.91
TM6SF1-201ENST00000258909 KIF12Q96FN5 646 aa20.72■□□□□ 0.91
TM6SF1-201ENST00000258909 SUSD3Q96L08 255 aa20.72■□□□□ 0.91
TM6SF1-201ENST00000258909 CYP4F11Q9HBI6 524 aa20.72■□□□□ 0.91
TM6SF1-201ENST00000258909 WDR87Q6ZQQ6 2873 aa20.72■□□□□ 0.91
TM6SF1-201ENST00000258909 TTC26A0AVF1 554 aa20.71■□□□□ 0.91
TM6SF1-201ENST00000258909 LACTBL1A8MY62 500 aa20.71■□□□□ 0.91
TM6SF1-201ENST00000258909 H7C4K7 107 aa20.71■□□□□ 0.91
TM6SF1-201ENST00000258909 SEC24AO95486 1093 aa20.71■□□□□ 0.91
TM6SF1-201ENST00000258909 NMT1P30419 496 aaKnown RBP20.71■□□□□ 0.91
TM6SF1-201ENST00000258909 ZNF131P52739 623 aa20.71■□□□□ 0.91
TM6SF1-201ENST00000258909 GPC5P78333 572 aa20.71■□□□□ 0.91
TM6SF1-201ENST00000258909 NPAS3Q8IXF0 933 aa20.71■□□□□ 0.91
TM6SF1-201ENST00000258909 LARP4BQ92615 738 aaKnown RBP20.71■□□□□ 0.91
TM6SF1-201ENST00000258909 DDX12PQ92771 950 aa20.71■□□□□ 0.91
TM6SF1-201ENST00000258909 TBC1D17Q9HA65 648 aa20.71■□□□□ 0.91
TM6SF1-201ENST00000258909 PLEKHA5Q9HAU0 1116 aa20.71■□□□□ 0.91
TM6SF1-201ENST00000258909 MRPS23Q9Y3D9 190 aaKnown RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms