RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 SHC3Q92529 594 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 KAT5Q92993 513 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 JAKMIP2Q96AA8 810 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 C16orf45Q96MC5 204 aaPredicted RBP10.19□□□□□ -0.78
NIP7-202ENST00000254941 DEFB118Q96PH6 123 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 TRIM6Q9C030 488 aaPredicted RBP10.19□□□□□ -0.78
NIP7-202ENST00000254941 RNF208Q9H0X6 261 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 DEF6Q9H4E7 631 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 HAUS4Q9H6D7 363 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.19□□□□□ -0.78
NIP7-202ENST00000254941 OGDHLQ9ULD0 1010 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 ST3GAL5Q9UNP4 418 aa10.19□□□□□ -0.78
NIP7-202ENST00000254941 KIAA0100Q14667 2235 aaKnown RBP10.19□□□□□ -0.78
NIP7-202ENST00000254941 ZNF263O14978 683 aa10.18□□□□□ -0.78
NIP7-202ENST00000254941 GPR182O15218 404 aa10.18□□□□□ -0.78
NIP7-202ENST00000254941 TNNC2P02585 160 aa10.18□□□□□ -0.78
NIP7-202ENST00000254941 NFICP08651 508 aa10.18□□□□□ -0.78
NIP7-202ENST00000254941 ANXA13P27216 316 aa10.18□□□□□ -0.78
NIP7-202ENST00000254941 NOP14P78316 857 aaKnown RBP10.18□□□□□ -0.78
NIP7-202ENST00000254941 SPA17Q15506 151 aa10.18□□□□□ -0.78
NIP7-202ENST00000254941 PTPN14Q15678 1187 aa10.18□□□□□ -0.78
NIP7-202ENST00000254941 SLC18A3Q16572 532 aa10.18□□□□□ -0.78
NIP7-202ENST00000254941 SGSM1Q2NKQ1 1148 aa10.18□□□□□ -0.78
NIP7-202ENST00000254941 FBXO47Q5MNV8 452 aa10.18□□□□□ -0.78
NIP7-202ENST00000254941 UBXN11Q5T124 520 aa10.18□□□□□ -0.78
NIP7-202ENST00000254941 ZNF662Q6ZS27 426 aa10.18□□□□□ -0.78
NIP7-202ENST00000254941 ZNF571Q7Z3V5 609 aaPredicted RBP10.18□□□□□ -0.78
NIP7-202ENST00000254941 IMPG2Q9BZV3 1241 aa10.18□□□□□ -0.78
NIP7-202ENST00000254941 TRPV6Q9H1D0 765 aa10.18□□□□□ -0.78
NIP7-202ENST00000254941 NXF3Q9H4D5 531 aaKnown RBP10.18□□□□□ -0.78
NIP7-202ENST00000254941 CHST12Q9NRB3 414 aa10.18□□□□□ -0.78
NIP7-202ENST00000254941 SNTG2Q9NY99 539 aa10.18□□□□□ -0.78
NIP7-202ENST00000254941 SQORQ9Y6N5 450 aa10.18□□□□□ -0.78
NIP7-202ENST00000254941 TBXAS1P24557 533 aaPredicted RBP10.17□□□□□ -0.78
NIP7-202ENST00000254941 CDK7P50613 346 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 YARSP54577 528 aaKnown RBP10.17□□□□□ -0.78
NIP7-202ENST00000254941 CYP27A1Q02318 531 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 GFPT1Q06210 699 aaPredicted RBP10.17□□□□□ -0.78
NIP7-202ENST00000254941 TMEM132DQ14C87 1099 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 SCARA3Q6AZY7 606 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 TWF2Q6IBS0 349 aaKnown RBP10.17□□□□□ -0.78
NIP7-202ENST00000254941 SPOPLQ6IQ16 392 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 ALKAL1Q6UXT8 129 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 C1orf127Q8N9H9 656 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 USP38Q8NB14 1042 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 CXorf38Q8TB03 319 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 ELMO3Q96BJ8 720 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 SNX27Q96L92 541 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 SYT11Q9BT88 431 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 XYLT2Q9H1B5 865 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 AGO3Q9H9G7 860 aaKnown RBP10.17□□□□□ -0.78
NIP7-202ENST00000254941 APOBEC3GQ9HC16 384 aaKnown RBP10.17□□□□□ -0.78
NIP7-202ENST00000254941 ADAMTS1Q9UHI8 967 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 DERAQ9Y315 318 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 HES2Q9Y543 173 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 NUB1Q9Y5A7 615 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 A0A087X0T9 212 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 A0A0U1RQJ8 604 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 KIF2AO00139 706 aaPredicted RBP10.17□□□□□ -0.78
NIP7-202ENST00000254941 OFD1O75665 1012 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 RECQL4O94761 1208 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 MYCP01106 439 aaPredicted RBP10.17□□□□□ -0.78
NIP7-202ENST00000254941 TUBB4AP04350 444 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 FAM228BP0C875 321 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 CKBP12277 381 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 MYL6P60660 151 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 NFX1Q12986 1120 aaKnown RBP10.17□□□□□ -0.78
NIP7-202ENST00000254941 TRPC3Q13507 836 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 CUL2Q13617 745 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 BMS1Q14692 1282 aaKnown RBP10.17□□□□□ -0.78
NIP7-202ENST00000254941 ZBTB6Q15916 424 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 XKR4Q5GH76 650 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 ZNF618Q5T7W0 954 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 CTU1Q7Z7A3 348 aaKnown RBP10.17□□□□□ -0.78
NIP7-202ENST00000254941 VPS36Q86VN1 386 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 SMG8Q8ND04 991 aaKnown RBP10.17□□□□□ -0.78
NIP7-202ENST00000254941 ATRIPQ8WXE1 791 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 TAF4BQ92750 862 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 FAXDC2Q96IV6 333 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 TSPAN18Q96SJ8 248 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 IFIH1Q9BYX4 1025 aaKnown RBP10.17□□□□□ -0.78
NIP7-202ENST00000254941 OSBPL7Q9BZF2 842 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 ERVK-5Q9HDB9 667 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 CNTN3Q9P232 1028 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 SIX4Q9UIU6 781 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 PADI3Q9ULW8 664 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 IPPQ9Y573 584 aa10.17□□□□□ -0.78
NIP7-202ENST00000254941 TDRD15B5MCY1 1934 aaKnown RBP10.17□□□□□ -0.78
NIP7-202ENST00000254941 GHRP10912 638 aa10.16□□□□□ -0.78
NIP7-202ENST00000254941 TNNT1P13805 278 aa10.16□□□□□ -0.78
NIP7-202ENST00000254941 ARHGAP25P42331 645 aa10.16□□□□□ -0.78
NIP7-202ENST00000254941 VAV2P52735 878 aa10.16□□□□□ -0.78
NIP7-202ENST00000254941 LPIN1Q14693 890 aa10.16□□□□□ -0.78
NIP7-202ENST00000254941 ARHGAP29Q52LW3 1261 aa10.16□□□□□ -0.78
NIP7-202ENST00000254941 SMYD5Q6GMV2 418 aa10.16□□□□□ -0.78
NIP7-202ENST00000254941 FBXO46Q6PJ61 603 aaPredicted RBP10.16□□□□□ -0.78
NIP7-202ENST00000254941 KIAA1328Q86T90 577 aa10.16□□□□□ -0.78
NIP7-202ENST00000254941 KIF12Q96FN5 646 aa10.16□□□□□ -0.78
NIP7-202ENST00000254941 ZMAT2Q96NC0 199 aaKnown RBP10.16□□□□□ -0.78
NIP7-202ENST00000254941 ARID3AQ99856 593 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms